Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19690 Striga asiatica HOM05D007964 ORTHO05D010090 4.9e-72 274.2 128 100.0
Migut.O00757 Erythranthe guttata HOM05D007964 ORTHO05D010090 2.2e-40 169.1 132 63.6
Migut.N02947 Erythranthe guttata HOM05D007964 ORTHO05D010090 1.6e-38 162.9 132 62.1
SalBow6G4546 Salvia bowleyana HOM05D007964 ORTHO05D010090 4.3e-36 154.8 125 56.8
Oeu046067.1 Olea europaea HOM05D007964 ORTHO05D010090 7.4e-36 154.1 128 58.6
Peaxi162Scf00360g00092 Petunia axillaris HOM05D007964 ORTHO05D010090 1.4e-34 149.8 133 60.9
CSS0006430 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.7e-32 142.9 134 55.2
CSS0037867 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.7e-32 142.9 134 55.2
PGSC0003DMG400025075 Solanum tuberosum HOM05D007964 ORTHO05D010090 2.2e-32 142.5 131 54.2
Nitab4.5_0003443g0080 Nicotiana tabacum HOM05D007964 ORTHO05D010090 3.0e-29 132.1 95 62.1
Nitab4.5_0003178g0050 Nicotiana tabacum HOM05D007964 ORTHO05D010090 3.9e-29 131.7 95 61.1
Rhsim06G0092800 Rhododendron simsii HOM05D007964 ORTHO05D010090 8.8e-29 130.6 110 55.5
Potri.005G198200 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.5e-28 129.8 135 51.1
Phvul.004G087600 Phaseolus vulgaris HOM05D007964 ORTHO05D010090 1.3e-27 126.7 129 51.2
Sabra05G0151100 Salix brachista HOM05D007964 ORTHO05D010090 1.7e-27 126.3 135 51.1
Hma1.2p1_0678F.1_g202130 Hydrangea macrophylla HOM05D007964 ORTHO05D010090 4.8e-27 124.8 128 54.7
QL02p037092 Quercus lobata HOM05D007964 ORTHO05D010090 4.8e-27 124.8 133 49.6
Ciclev10003908m.g Citrus clementina HOM05D007964 ORTHO05D010090 6.3e-27 124.4 139 50.4
QL02p036563 Quercus lobata HOM05D007964 ORTHO05D010090 1.8e-26 122.9 133 49.6
Haze_17821 Corylus avellana HOM05D007964 ORTHO05D010090 2.4e-26 122.5 137 46.7
Manes.02G184300 Manihot esculenta HOM05D007964 ORTHO05D010090 3.1e-26 122.1 138 49.3
Cfa018267 Carpinus fangiana HOM05D007964 ORTHO05D010090 7.0e-26 120.9 137 47.4
MELO3C019968.2 Cucumis melo HOM05D007964 ORTHO05D010090 1.2e-25 120.2 139 45.3
Glyma.02G078400 Glycine max HOM05D007964 ORTHO05D010090 1.2e-25 120.2 129 49.6
CsaV3_6G004920 Cucumis sativus L. HOM05D007964 ORTHO05D010090 2.6e-25 119.0 139 44.6
Lalb_Chr19g0130001 Lupinus albus HOM05D007964 ORTHO05D010090 2.6e-25 119.0 114 55.3
CAN.G1183.20 Capsicum annuum HOM05D007964 ORTHO05D010090 3.5e-25 118.6 94 58.5
Lsat_1_v5_gn_6_100061 Lactuca sativa HOM05D007964 ORTHO05D010090 5.9e-25 117.9 117 52.1
Thecc.08G162400 Theobroma cacao HOM05D007964 ORTHO05D010090 7.7e-25 117.5 136 46.3
Ca_04662_v3 Cicer arietinum L. HOM05D007964 ORTHO05D010090 1.3e-24 116.7 130 49.2
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 1.3e-24 116.7 144 43.8
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 2.9e-24 115.5 144 43.8
COL.COLO4_29112 Corchorus olitorius HOM05D007964 ORTHO05D010090 3.8e-24 115.2 135 46.7
CiPaw.15G011700 Carya illinoinensis HOM05D007964 ORTHO05D010090 5.0e-24 114.8 130 50.8
Psat0s1172g0240 Pisum sativum HOM05D007964 ORTHO05D010090 5.0e-24 114.8 130 48.5
Sopen04g028110 Solanum pennellii HOM05D007964 ORTHO05D010090 5.0e-24 114.8 95 56.8
Medtr6g039830 Medicago truncatula HOM05D007964 ORTHO05D010090 6.5e-24 114.4 129 50.4
PGR042G2516 Punica granatum HOM05D007964 ORTHO05D010090 6.5e-24 114.4 132 49.2
Atru.chr13.1988 Acer truncatum HOM05D007964 ORTHO05D010090 8.5e-24 114.0 142 47.2
Aa31LG4G8900 Aethionema arabicum HOM05D007964 ORTHO05D010090 8.5e-24 114.0 131 49.6
Gorai.010G134000 Gossypium raimondii HOM05D007964 ORTHO05D010090 8.5e-24 114.0 120 47.5
Glyma.16G161400 Glycine max HOM05D007964 ORTHO05D010090 1.9e-23 112.8 115 51.3
THA.LOC104810508 Tarenaya hassleriana HOM05D007964 ORTHO05D010090 1.9e-23 112.8 101 56.4
EL10Ac1g01623 Beta vulgaris HOM05D007964 ORTHO05D010090 4.2e-23 111.7 131 48.1
Gohir.D06G116200 Gossypium hirsutum HOM05D007964 ORTHO05D010090 9.4e-23 110.5 120 45.8
Gohir.A06G112000 Gossypium hirsutum HOM05D007964 ORTHO05D010090 2.1e-22 109.4 120 49.2
Nn5g28859 Nelumbo nucifera HOM05D007964 ORTHO05D010090 2.1e-22 109.4 113 51.3
Prupe.8G043200 Prunus persica HOM05D007964 ORTHO05D010090 2.7e-22 109.0 130 47.7
DCAR_001195 Daucus carota HOM05D007964 ORTHO05D010090 4.7e-22 108.2 92 57.6
AUR62026621 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.4e-21 106.7 130 48.5
AUR62034908 Chenopodium quinoa HOM05D007964 ORTHO05D010090 1.4e-21 106.7 130 48.5
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 1.8e-21 106.3 145 41.4
FAN20G1166 Fragaria x ananassa HOM05D007964 ORTHO05D010090 2.3e-21 105.9 130 46.9
FAN27G1192 Fragaria x ananassa HOM05D007964 ORTHO05D010090 2.3e-21 105.9 129 47.3
CANSAT25G1394 Cannabis sativa HOM05D007964 ORTHO05D010090 5.2e-21 104.8 130 45.4
Potri.002G062950 Populus trichocarpa HOM05D007964 ORTHO05D010090 1.1e-20 103.6 135 44.4
Ah.05g167820 Amaranthus hybridus HOM05D007964 ORTHO05D010090 2.6e-20 102.4 116 53.4
FvH4_2g12880 Fragaria vesca HOM05D007964 ORTHO05D010090 1.7e-19 99.8 129 45.7
FAN24G2710 Fragaria x ananassa HOM05D007964 ORTHO05D010090 1.7e-19 99.8 129 45.7
BolC6t39631H Brassica oleracea HOM05D007964 ORTHO05D010090 2.2e-19 99.4 125 46.4
Sp5g26770 Schrenkiella parvula HOM05D007964 ORTHO05D010090 2.2e-19 99.4 127 46.5
BraA07t31354Z Brassica rapa HOM05D007964 ORTHO05D010090 3.7e-19 98.6 132 44.7
Aqoxy6G00437 Aquilegia oxysepala HOM05D007964 ORTHO05D010090 6.3e-19 97.8 123 43.9
CARHR291050 Cardamine hirsuta HOM05D007964 ORTHO05D010090 1.1e-18 97.1 111 47.7
AT1G71740 Arabidopsis thaliana HOM05D007964 ORTHO05D010090 1.8e-18 96.3 101 49.5
A07p37890 Brassica napus HOM05D007964 ORTHO05D010090 1.8e-18 96.3 120 47.5
RcHm_v2.0_Chr6g0273981 Rosa chinensis HOM05D007964 ORTHO05D010090 1.8e-18 96.3 131 45.8
Thhalv10019796m.g Eutrema salsugineum HOM05D007964 ORTHO05D010090 2.4e-18 95.9 106 50.9
BcaC08g46600 Brassica carinata HOM05D007964 ORTHO05D010090 5.3e-18 94.7 129 44.2
C06p45790 Brassica napus HOM05D007964 ORTHO05D010090 5.3e-18 94.7 129 44.2
Carub.0002s1850 Capsella rubella HOM05D007964 ORTHO05D010090 5.3e-18 94.7 124 47.6
AL2G31310 Arabidopsis lyrata HOM05D007964 ORTHO05D010090 4.5e-17 91.7 106 48.1
CSS0037942 Camellia sinensis var. sinensis HOM05D007964 ORTHO05D010090 1.5e-15 86.7 68 61.8
Os02g0210900 Oryza sativa ssp. japonica HOM05D007964 ORTHO05D010090 4.7e-14 81.6 120 41.7
HPP92_000633 Vanilla planifolia HOM05D007964 ORTHO05D010090 2.8e-11 72.4 127 37.8
ATR1120G014 Amborella trichopoda HOM05D007964 ORTHO05D010090 1.1e-10 70.5 127 35.4
Zm00001eb205370 Zea mays HOM05D007964 ORTHO05D010090 5.9e-09 64.7 71 49.3
MSTRG.2266 Avicennia marina HOM05D002803 ORTHO05D003089 2.9e-08 62.4 122 36.9
MBI10_g08546_MAGBIO Magnolia biondii HOM05D008294 ORTHO05D010468 3.6e-06 55.5 105 34.3
SGA_v2.0_scaffold16G07882 Striga asiatica HOM05D002803 ORTHO05D003089 4.7e-06 55.1 136 28.7


User provided reference genes

Program Settings