Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19651 Striga asiatica HOM05D000089 ORTHO05D403626 1.8e-57 225.7 114 100.0
SGA_v2.0_scaffold163G37976 Striga asiatica HOM05D000590 ORTHO05D051390 3.2e-38 161.8 88 92.0
SGA_v2.0_scaffold28G11882 Striga asiatica HOM05D000239 ORTHO05D000484 1.3e-23 113.2 89 70.8
SGA_v2.0_scaffold43G16480 Striga asiatica HOM05D000089 ORTHO05D000726 1.3e-15 86.7 72 62.5
MSTRG.17187 Avicennia marina HOM05D000089 ORTHO05D000726 9.6e-11 70.5 73 56.2
SGA_v2.0_scaffold2G01362 Striga asiatica HOM05D000089 ORTHO05D000726 9.0e-09 63.9 73 50.7
SGA_v2.0_scaffold153G37004 Striga asiatica HOM05D000089 ORTHO05D000726 1.2e-08 63.5 75 48.0
CSS0009356 Camellia sinensis var. sinensis HOM05D000089 ORTHO05D000726 1.5e-08 63.2 68 50.0
MSTRG.17189 Avicennia marina HOM05D000089 ORTHO05D000726 2.0e-08 62.8 61 55.7
Dinv43707 Davidia involucrata HOM05D000089 ORTHO05D000726 2.0e-08 62.8 100 41.0
Migut.B01627 Erythranthe guttata HOM05D000089 ORTHO05D000726 2.0e-08 62.8 86 41.9
Migut.B01629 Erythranthe guttata HOM05D000089 ORTHO05D000726 2.0e-08 62.8 62 53.2
Hma1.2p1_0033F.1_g021190 Hydrangea macrophylla HOM05D000089 ORTHO05D000726 2.6e-08 62.4 62 53.2
CSS0041400 Camellia sinensis var. sinensis HOM05D000089 ORTHO05D000726 3.4e-08 62.0 68 48.5
SGA_v2.0_scaffold95G28901 Striga asiatica HOM05D000089 ORTHO05D000726 4.5e-08 61.6 73 49.3
Cfa001725 Carpinus fangiana HOM05D000089 ORTHO05D000726 5.8e-08 61.2 71 43.7
Dinv43705 Davidia involucrata HOM05D000089 ORTHO05D000726 5.8e-08 61.2 68 51.5
Solyc01g094070.3 Solanum lycopersicum HOM05D000089 ORTHO05D000726 5.8e-08 61.2 73 46.6
vmacro13402 Vaccinium macrocarpon HOM05D000089 ORTHO05D000726 5.8e-08 61.2 61 54.1
Actinidia31409 Actinidia chinensis HOM05D000089 ORTHO05D000726 7.6e-08 60.8 73 46.6
CSS0008567 Camellia sinensis var. sinensis HOM05D000089 ORTHO05D000726 7.6e-08 60.8 68 51.5
Cc02_g23910 Coffea canephora HOM05D000089 ORTHO05D000726 7.6e-08 60.8 62 51.6
SGA_v2.0_scaffold153G37006 Striga asiatica HOM05D000089 ORTHO05D000726 7.6e-08 60.8 56 57.1
Cfa001729 Carpinus fangiana HOM05D000089 ORTHO05D000726 9.9e-08 60.5 71 45.1
Cc02_g36730 Coffea canephora HOM05D000089 ORTHO05D000726 1.3e-07 60.1 62 53.2
Duzib268G0399 Durio zibethinus HOM05D000089 ORTHO05D000726 1.3e-07 60.1 70 48.6
Duzib268G0779 Durio zibethinus HOM05D000089 ORTHO05D000726 1.3e-07 60.1 68 48.5
Hma1.2p1_0301F.1_g118670 Hydrangea macrophylla HOM05D000089 ORTHO05D000726 1.3e-07 60.1 62 53.2
Lj3A551G26 Lonicera japonica HOM05D000089 ORTHO05D000726 1.3e-07 60.1 64 48.4
SalBow5G4402 Salvia bowleyana HOM05D000089 ORTHO05D000726 1.3e-07 60.1 76 46.1
Thecc.01G376900 Theobroma cacao HOM05D000089 ORTHO05D000726 1.3e-07 60.1 101 38.6
CSS0039811 Camellia sinensis var. sinensis HOM05D000089 ORTHO05D000726 2.2e-07 59.3 68 48.5
Lj9C569T3 Lonicera japonica HOM05D000089 ORTHO05D000726 2.2e-07 59.3 64 48.4
Haze_16807 Corylus avellana HOM05D000089 ORTHO05D000726 2.9e-07 58.9 70 44.3
Phvul.011G212800 Phaseolus vulgaris HOM05D000089 ORTHO05D000726 2.9e-07 58.9 64 50.0
Sopen01g037880 Solanum pennellii HOM05D000089 ORTHO05D000726 2.9e-07 58.9 62 50.0
CSS0044689 Camellia sinensis var. sinensis HOM05D000089 ORTHO05D000726 3.8e-07 58.5 68 47.1
MSTRG.17188 Avicennia marina HOM05D000089 ORTHO05D000726 4.9e-07 58.2 60 50.0
MSTRG.17197 Avicennia marina HOM05D000089 ORTHO05D000726 4.9e-07 58.2 60 50.0
QL08p052561 Quercus lobata HOM05D000089 ORTHO05D000726 4.9e-07 58.2 64 46.9
SEGI_22066 Sequoiadendron giganteum HOM05D000089 ORTHO05D000726 4.9e-07 58.2 100 34.0
GSVIVG01027600001 Vitis vinifera HOM05D000089 ORTHO05D000726 4.9e-07 58.2 62 53.2
ClCG06G000400 Citrullus lanatus HOM05D000089 ORTHO05D000726 6.4e-07 57.8 62 46.8
Manes.05G045600 Manihot esculenta HOM05D000089 ORTHO05D000726 6.4e-07 57.8 60 53.3
Rhsim07G0027700 Rhododendron simsii HOM05D000089 ORTHO05D000726 6.4e-07 57.8 61 50.8
Cfa001730 Carpinus fangiana HOM05D000089 ORTHO05D000726 8.4e-07 57.4 71 42.3
Eucgr.E01427 Eucalyptus grandis HOM05D000089 ORTHO05D000726 8.4e-07 57.4 62 51.6
Eucgr.E01429 Eucalyptus grandis HOM05D000089 ORTHO05D000726 8.4e-07 57.4 62 51.6
Potri.002G147702 Populus trichocarpa HOM05D000089 ORTHO05D000726 8.4e-07 57.4 68 48.5
Prupe.2G144700 Prunus persica HOM05D000089 ORTHO05D000726 8.4e-07 57.4 90 40.0
SalBow5G0116 Salvia bowleyana HOM05D000089 ORTHO05D000726 8.4e-07 57.4 77 46.8
SalBow5G3833 Salvia bowleyana HOM05D000089 ORTHO05D000726 8.4e-07 57.4 77 46.8
Glyma.13G203900 Glycine max HOM05D000089 ORTHO05D000726 1.1e-06 57.0 92 41.3
Lj3A550T49 Lonicera japonica HOM05D000089 ORTHO05D000726 1.1e-06 57.0 64 45.3
Manes.01G266200 Manihot esculenta HOM05D000089 ORTHO05D000726 1.1e-06 57.0 61 54.1
TWI59G0149 Tripterygium wilfordii HOM05D000089 ORTHO05D000726 1.1e-06 57.0 100 37.0
Medtr7g074730 Medicago truncatula HOM05D000089 ORTHO05D000726 1.4e-06 56.6 65 46.2
CARHR181470 Cardamine hirsuta HOM05D000089 ORTHO05D000726 1.9e-06 56.2 65 44.6
Cfa001728 Carpinus fangiana HOM05D000089 ORTHO05D000726 1.9e-06 56.2 70 42.9
CsaV3_6G006190 Cucumis sativus L. HOM05D000089 ORTHO05D000726 1.9e-06 56.2 67 46.3
Eucgr.E01430 Eucalyptus grandis HOM05D000089 ORTHO05D000726 1.9e-06 56.2 62 51.6
FvH4_7g11781 Fragaria vesca HOM05D000089 ORTHO05D000726 1.9e-06 56.2 63 47.6
FAN03G3215 Fragaria x ananassa HOM05D000089 ORTHO05D000726 1.9e-06 56.2 63 47.6
FAN10G4105 Fragaria x ananassa HOM05D000089 ORTHO05D000726 1.9e-06 56.2 63 47.6
Gohir.D07G151800 Gossypium hirsutum HOM05D000089 ORTHO05D000726 1.9e-06 56.2 64 46.9
Gorai.001G173700 Gossypium raimondii HOM05D000089 ORTHO05D000726 1.9e-06 56.2 64 46.9
Sabra02G0116800 Salix brachista HOM05D000089 ORTHO05D000726 1.9e-06 56.2 93 38.7
Thecc.01G376800 Theobroma cacao HOM05D000089 ORTHO05D000726 1.9e-06 56.2 68 45.6
FAN10G3529 Fragaria x ananassa HOM05D000089 ORTHO05D000726 2.4e-06 55.8 63 47.6
Oeu005787.1 Olea europaea HOM05D000089 ORTHO05D000726 2.4e-06 55.8 62 48.4
CiPaw.02G168100 Carya illinoinensis HOM05D000089 ORTHO05D000726 3.2e-06 55.5 64 43.8
Eucgr.E01434 Eucalyptus grandis HOM05D000089 ORTHO05D000726 3.2e-06 55.5 62 50.0
Lj9A569G49 Lonicera japonica HOM05D000089 ORTHO05D000726 3.2e-06 55.5 64 46.9
Sp2g07460 Schrenkiella parvula HOM05D000089 ORTHO05D000726 3.2e-06 55.5 65 44.6
CiPaw.02G168200 Carya illinoinensis HOM05D000089 ORTHO05D000726 4.2e-06 55.1 71 43.7
Eucgr.F01589 Eucalyptus grandis HOM05D000089 ORTHO05D000726 4.2e-06 55.1 65 46.2
FvH4_7g11790 Fragaria vesca HOM05D000089 ORTHO05D000726 4.2e-06 55.1 70 45.7
FAN01G0964 Fragaria x ananassa HOM05D000089 ORTHO05D000726 4.2e-06 55.1 63 46.0
FAN06G0064 Fragaria x ananassa HOM05D000089 ORTHO05D000726 4.2e-06 55.1 70 45.7
FAN06G3665 Fragaria x ananassa HOM05D000089 ORTHO05D000726 4.2e-06 55.1 63 46.0
QL08p052578 Quercus lobata HOM05D000089 ORTHO05D000726 4.2e-06 55.1 62 46.8
Sabra02G0115300 Salix brachista HOM05D000089 ORTHO05D000726 4.2e-06 55.1 61 47.5
Sabra02G0116900 Salix brachista HOM05D000089 ORTHO05D000726 4.2e-06 55.1 61 47.5
SEGI_04496 Sequoiadendron giganteum HOM05D000089 ORTHO05D000726 4.2e-06 55.1 71 40.8
TWI53G1865 Tripterygium wilfordii HOM05D000089 ORTHO05D000726 4.2e-06 55.1 58 48.3
AT5G42800 Arabidopsis thaliana HOM05D000089 ORTHO05D000726 5.5e-06 54.7 65 44.6
BcaB07g31043 Brassica carinata HOM05D000089 ORTHO05D000726 5.5e-06 54.7 65 43.1
BcaC04g21969 Brassica carinata HOM05D000089 ORTHO05D000726 5.5e-06 54.7 65 43.1
A09p19990 Brassica napus HOM05D000089 ORTHO05D000726 5.5e-06 54.7 65 43.1
BolC9t55434H Brassica oleracea HOM05D000089 ORTHO05D000726 5.5e-06 54.7 65 43.1
BraA09t37608Z Brassica rapa HOM05D000089 ORTHO05D000726 5.5e-06 54.7 65 43.1
Carub.0008s0610 Capsella rubella HOM05D000089 ORTHO05D000726 5.5e-06 54.7 65 46.2
Duzib268G0973 Durio zibethinus HOM05D000089 ORTHO05D000726 5.5e-06 54.7 70 45.7
Sabra02G0115200 Salix brachista HOM05D000089 ORTHO05D000726 5.5e-06 54.7 93 37.6
Sabra02G0117000 Salix brachista HOM05D000089 ORTHO05D000726 5.5e-06 54.7 61 45.9
TWI74G0702 Tripterygium wilfordii HOM05D000089 ORTHO05D000726 5.5e-06 54.7 58 48.3
AL61U10020 Arabidopsis lyrata HOM05D000089 ORTHO05D000726 7.1e-06 54.3 58 46.6
AL8G18230 Arabidopsis lyrata HOM05D000089 ORTHO05D000726 7.1e-06 54.3 65 44.6
CiPaw.02G168300 Carya illinoinensis HOM05D000089 ORTHO05D000726 7.1e-06 54.3 64 42.2
Eucgr.E01438 Eucalyptus grandis HOM05D000089 ORTHO05D000726 7.1e-06 54.3 62 46.8
Eucgr.L02449 Eucalyptus grandis HOM05D000089 ORTHO05D000726 7.1e-06 54.3 62 46.8
Thhalv10003227m.g Eutrema salsugineum HOM05D000089 ORTHO05D000726 7.1e-06 54.3 65 43.1
MD08G1231300 Malus domestica HOM05D000089 ORTHO05D000726 7.1e-06 54.3 76 43.4
Potri.002G147500 Populus trichocarpa HOM05D000089 ORTHO05D000726 7.1e-06 54.3 62 46.8
Potri.002G147600 Populus trichocarpa HOM05D000089 ORTHO05D000726 7.1e-06 54.3 94 36.2
Potri.002G147602 Populus trichocarpa HOM05D000089 ORTHO05D000726 7.1e-06 54.3 94 36.2
Potri.002G147800 Populus trichocarpa HOM05D000089 ORTHO05D000726 7.1e-06 54.3 62 46.8
THA.LOC104801920 Tarenaya hassleriana HOM05D000089 ORTHO05D000726 7.1e-06 54.3 65 43.1
VMungo1127G2252 Vigna mungo HOM05D000089 ORTHO05D000726 7.1e-06 54.3 64 45.3
MSTRG.17186 Avicennia marina HOM05D000089 ORTHO05D000726 9.3e-06 53.9 62 46.8
COL.COLO4_12539 Corchorus olitorius HOM05D000089 ORTHO05D000726 9.3e-06 53.9 69 47.8
Eucgr.E01425 Eucalyptus grandis HOM05D000089 ORTHO05D000726 9.3e-06 53.9 62 50.0
Eucgr.E01436 Eucalyptus grandis HOM05D000089 ORTHO05D000726 9.3e-06 53.9 61 47.5
Gohir.D05G195700 Gossypium hirsutum HOM05D000089 ORTHO05D000726 9.3e-06 53.9 65 44.6
Gorai.009G200600 Gossypium raimondii HOM05D000089 ORTHO05D000726 9.3e-06 53.9 65 44.6
MBI18_g03647_MAGBIO Magnolia biondii HOM05D000089 ORTHO05D000104 9.3e-06 53.9 82 39.0
MD02G1205000 Malus domestica HOM05D000089 ORTHO05D000726 9.3e-06 53.9 63 42.9
Potri.002G033600 Populus trichocarpa HOM05D000089 ORTHO05D000726 9.3e-06 53.9 65 44.6
Potri.006G087200 Populus trichocarpa HOM05D000089 ORTHO05D000726 9.3e-06 53.9 67 49.3
QL02p009167 Quercus lobata HOM05D000089 ORTHO05D000726 9.3e-06 53.9 65 44.6
RcHm_v2.0_Chr1g0350371 Rosa chinensis HOM05D000089 ORTHO05D000726 9.3e-06 53.9 61 47.5
RcHm_v2.0_Chr1g0350471 Rosa chinensis HOM05D000089 ORTHO05D000726 9.3e-06 53.9 63 44.4


User provided reference genes

Program Settings