Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19650 Striga asiatica HOM05D000590 ORTHO05D051390 1.8e-60 235.7 119 100.0
SGA_v2.0_scaffold163G37976 Striga asiatica HOM05D000590 ORTHO05D051390 8.4e-50 200.3 103 98.1
SGA_v2.0_scaffold44G16791 Striga asiatica HOM05D000590 ORTHO05D001713 7.4e-14 80.9 74 56.8
CAN.G108.68 Capsicum annuum HOM05D000590 ORTHO05D001713 4.1e-12 75.1 74 51.4
Oeu041317.3 Olea europaea HOM05D000590 ORTHO05D001713 6.9e-12 74.3 74 52.7
Nitab4.5_0001520g0030 Nicotiana tabacum HOM05D000590 ORTHO05D001713 1.2e-11 73.6 71 52.1
Nitab4.5_0012058g0010 Nicotiana tabacum HOM05D000590 ORTHO05D001713 2.0e-11 72.8 74 47.3
Lj1C1015G9 Lonicera japonica HOM05D000590 ORTHO05D001713 3.4e-11 72.0 72 50.0
PGSC0003DMG400009121 Solanum tuberosum HOM05D000590 ORTHO05D001713 3.4e-11 72.0 72 52.8
CSS0007436 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D001713 4.5e-11 71.6 72 48.6
CSS0014100 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D001713 4.5e-11 71.6 72 48.6
Migut.F00224 Erythranthe guttata HOM05D000590 ORTHO05D001713 4.5e-11 71.6 74 50.0
Peaxi162Scf00550g00547 Petunia axillaris HOM05D000590 ORTHO05D001713 5.9e-11 71.2 74 47.3
Solyc03g083410.3 Solanum lycopersicum HOM05D000590 ORTHO05D001713 7.7e-11 70.9 74 50.0
Cc02_g01660 Coffea canephora HOM05D000590 ORTHO05D001713 1.7e-10 69.7 74 48.6
HanXRQChr09g0252891 Helianthus annuus HOM05D000590 ORTHO05D001713 2.2e-10 69.3 72 50.0
Oeu037087.2 Olea europaea HOM05D000590 ORTHO05D001713 3.8e-10 68.6 74 50.0
Dinv29292 Davidia involucrata HOM05D000590 ORTHO05D001713 5.0e-10 68.2 74 48.6
Lsat_1_v5_gn_9_58321 Lactuca sativa HOM05D000590 ORTHO05D001713 5.0e-10 68.2 74 48.6
CSS0002741 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D001713 6.5e-10 67.8 72 47.2
CSS0048359 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D001713 6.5e-10 67.8 72 47.2
Sopen03g023180 Solanum pennellii HOM05D000590 ORTHO05D001713 8.5e-10 67.4 74 47.3
PGSC0003DMG400020880 Solanum tuberosum HOM05D000590 ORTHO05D020273 8.5e-10 67.4 72 47.2
Rhsim03G0207900 Rhododendron simsii HOM05D000590 ORTHO05D001713 2.5e-09 65.9 72 45.8
vmacro06539 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 3.2e-09 65.5 72 45.8
ECA232G2153 Erigeron canadensis HOM05D000590 ORTHO05D001713 9.4e-09 63.9 72 47.2
unitig_92.g28257 Utricularia gibba HOM05D000590 ORTHO05D001713 3.6e-08 62.0 74 44.6
Medtr3g091310 Medicago truncatula HOM05D000590 ORTHO05D001713 6.1e-08 61.2 108 36.1
arahy.Tifrunner.gnm1.ann1.E3AN2D Arachis hypogaea HOM05D000590 ORTHO05D001713 3.9e-07 58.5 77 40.3
arahy.Tifrunner.gnm1.ann1.SPP5W5 Arachis hypogaea HOM05D000590 ORTHO05D001713 3.9e-07 58.5 77 40.3
TAR629G1215 Trochodendron aralioides HOM05D000590 ORTHO05D001713 6.7e-07 57.8 71 42.3
TAR636G2428 Trochodendron aralioides HOM05D000590 ORTHO05D001713 6.7e-07 57.8 68 41.2
Lalb_Chr23g0271561 Lupinus albus HOM05D000590 ORTHO05D001713 1.1e-06 57.0 77 35.1
Lalb_Chr08g0240301 Lupinus albus HOM05D000590 ORTHO05D001713 2.0e-06 56.2 77 33.8
TWI39G0115 Tripterygium wilfordii HOM05D000590 ORTHO05D001713 2.0e-06 56.2 72 40.3
Atru.chr2.1744 Acer truncatum HOM05D000590 ORTHO05D001713 2.6e-06 55.8 82 37.8
Aqoxy5G04235 Aquilegia oxysepala HOM05D000590 ORTHO05D001713 2.6e-06 55.8 66 40.9
Glyma.04G236500 Glycine max HOM05D000590 ORTHO05D001713 2.6e-06 55.8 74 36.5
Aa31LG3G9600 Aethionema arabicum HOM05D000590 ORTHO05D001713 4.4e-06 55.1 63 41.3
Thhalv10012524m.g Eutrema salsugineum HOM05D000590 ORTHO05D001713 4.4e-06 55.1 66 40.9
Phvul.009G053400 Phaseolus vulgaris HOM05D000590 ORTHO05D001713 4.4e-06 55.1 74 35.1
VMungo1309G0002 Vigna mungo HOM05D000590 ORTHO05D001713 4.4e-06 55.1 74 35.1
Ca_16699_v3 Cicer arietinum L. HOM05D000590 ORTHO05D001713 5.7e-06 54.7 65 43.1
arahy.Tifrunner.gnm1.ann1.AP90LP Arachis hypogaea HOM05D000590 ORTHO05D001713 7.4e-06 54.3 66 39.4
arahy.Tifrunner.gnm1.ann1.CMJ8L0 Arachis hypogaea HOM05D000590 ORTHO05D001713 7.4e-06 54.3 66 39.4
CANSAT21G0899 Cannabis sativa HOM05D000590 ORTHO05D001713 7.4e-06 54.3 68 38.2
Manes.14G006400 Manihot esculenta HOM05D000590 ORTHO05D001713 7.4e-06 54.3 76 39.5
Psat5g077640 Pisum sativum HOM05D000590 ORTHO05D001713 7.4e-06 54.3 101 36.6
Sed0011378 Sechium edule HOM05D000590 ORTHO05D001713 7.4e-06 54.3 66 37.9
A03p57600 Brassica napus HOM05D000590 ORTHO05D001713 9.7e-06 53.9 68 41.2
BraA03t14827Z Brassica rapa HOM05D000590 ORTHO05D001713 9.7e-06 53.9 68 41.2
MELO3C008490.2 Cucumis melo HOM05D000590 ORTHO05D001713 9.7e-06 53.9 65 40.0
CsaV3_3G019960 Cucumis sativus L. HOM05D000590 ORTHO05D001713 9.7e-06 53.9 65 40.0
Glyma.06G127800 Glycine max HOM05D000590 ORTHO05D001713 9.7e-06 53.9 72 36.1


User provided reference genes

Program Settings