Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 5.4e-182 641.0 344 100.0
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 9.6e-123 444.1 316 73.1
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 9.3e-118 427.6 362 64.1
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 6.1e-117 424.9 311 71.1
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 9.1e-105 384.4 308 65.3
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 1.0e-103 380.9 337 60.8
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 1.3e-103 380.6 310 62.9
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 6.5e-103 378.3 346 59.5
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 3.7e-98 362.5 346 56.9
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 1.6e-96 357.1 290 61.7
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 5.9e-96 355.1 290 61.7
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.7e-95 353.6 301 60.1
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.9e-95 352.8 284 62.7
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 3.8e-95 352.4 285 62.8
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.2e-94 349.4 301 59.5
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 7.2e-94 348.2 304 61.2
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 9.4e-94 347.8 310 60.6
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 3.6e-93 345.9 299 61.2
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 8.0e-93 344.7 307 59.3
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 8.0e-93 344.7 307 59.9
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 6.7e-92 341.7 343 56.0
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 8.8e-92 341.3 248 68.1
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.3e-90 337.4 316 58.5
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.2e-90 336.7 310 58.1
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 2.2e-90 336.7 246 67.9
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 4.8e-90 335.5 308 58.1
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.8e-89 333.6 291 61.2
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 3.1e-89 332.8 344 55.8
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 5.3e-89 332.0 311 55.9
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 5.3e-89 332.0 322 55.6
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 1.2e-88 330.9 301 58.1
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.2e-88 330.9 243 67.9
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 1.6e-88 330.5 287 61.3
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 2.0e-88 330.1 276 61.6
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 2.0e-88 330.1 358 53.4
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 4.5e-88 328.9 230 69.6
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 7.7e-88 328.2 249 66.7
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 7.7e-88 328.2 279 59.1
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.0e-87 327.8 259 65.3
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.3e-87 327.4 291 59.1
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 1.3e-87 327.4 295 57.3
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.3e-87 327.4 277 61.7
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 2.2e-87 326.6 353 53.3
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 6.5e-87 325.1 224 71.4
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 7.2e-86 321.6 322 54.0
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 9.4e-86 321.2 273 60.8
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.1e-85 320.1 350 51.7
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 2.1e-85 320.1 305 57.4
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 3.6e-85 319.3 225 70.7
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.4e-84 317.4 321 54.8
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 2.3e-84 316.6 306 53.9
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 3.0e-84 316.2 216 70.4
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 4.0e-84 315.8 281 58.7
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 6.8e-84 315.1 324 55.2
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 6.8e-84 315.1 348 50.6
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 8.8e-84 314.7 216 71.8
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.5e-83 313.9 301 56.5
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 2.0e-83 313.5 232 67.7
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 2.0e-83 313.5 224 67.9
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 2.6e-83 313.2 286 58.7
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 3.4e-83 312.8 278 59.4
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 4.4e-83 312.4 277 58.5
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.3e-82 310.8 220 70.9
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 1.3e-82 310.8 206 74.8
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 1.7e-82 310.5 308 53.2
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 2.8e-82 309.7 274 59.9
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 8.3e-82 308.1 293 57.0
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 8.3e-82 308.1 239 64.9
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.1e-81 307.8 214 70.1
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.4e-81 307.4 216 69.9
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.8e-81 307.0 230 70.0
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 4.1e-81 305.8 271 58.7
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 9.1e-81 304.7 216 70.8
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 1.2e-80 304.3 323 53.3
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-80 304.3 274 59.1
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.2e-80 304.3 296 57.8
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 1.6e-80 303.9 224 67.4
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 1.6e-80 303.9 293 57.3
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.0e-80 303.5 320 51.6
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 7.7e-80 301.6 275 55.6
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 1.0e-79 301.2 210 70.0
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 1.7e-79 300.4 226 67.3
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 1.7e-79 300.4 226 67.3
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.7e-79 300.4 225 67.6
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 1.7e-79 300.4 275 55.3
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 2.2e-79 300.1 272 58.8
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 5.0e-79 298.9 282 57.4
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 6.5e-79 298.5 314 53.2
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 2.5e-78 296.6 214 69.6
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 2.5e-78 296.6 227 67.0
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 2.5e-78 296.6 282 57.4
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 3.2e-78 296.2 182 77.5
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 4.2e-78 295.8 176 79.0
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.6e-77 293.9 314 52.5
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 4.7e-77 292.4 225 64.4
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 8.0e-77 291.6 193 74.1
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 8.0e-77 291.6 314 52.5
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 1.4e-76 290.8 320 51.9
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.0e-76 289.7 312 52.6
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.0e-75 287.0 187 74.9
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 4.4e-75 285.8 212 65.1
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 7.5e-75 285.0 282 53.9
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 9.8e-75 284.6 246 59.8
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 4.9e-74 282.3 276 55.1
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.0e-71 274.6 186 72.6
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 1.8e-68 263.8 242 57.4
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 1.1e-65 254.6 191 62.8
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 2.8e-61 240.0 247 52.6
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 4.7e-61 239.2 218 55.0
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 3.1e-60 236.5 252 51.2
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 2.6e-59 233.4 153 75.2
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 2.8e-53 213.4 175 58.3
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 1.4e-52 211.1 121 83.5
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 4.0e-52 209.5 197 55.3
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 5.2e-52 209.1 276 44.2
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 1.5e-51 207.6 174 56.9
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.4e-49 201.1 178 56.2
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 9.5e-46 188.3 103 83.5
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 1.6e-29 134.4 79 75.9
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 8.1e-29 132.1 69 84.1
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 9.3e-25 118.6 194 43.8
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 6.7e-15 85.9 58 70.7
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 1.3e-07 61.6 133 33.8
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 3.0e-07 60.5 45 64.4


User provided reference genes

Program Settings