Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19616 Striga asiatica HOM05D000938 ORTHO05D001451 1.0e-63 246.5 120 100.0
SGA_v2.0_scaffold273G46466 Striga asiatica HOM05D000938 ORTHO05D001451 2.1e-48 195.7 118 81.4
SGA_v2.0_scaffold107G30767 Striga asiatica HOM05D000938 ORTHO05D001451 4.1e-44 181.4 113 78.8
Migut.H00821 Erythranthe guttata HOM05D000938 ORTHO05D001451 1.5e-38 162.9 121 67.8
MSTRG.23491 Avicennia marina HOM05D000938 ORTHO05D001451 1.4e-33 146.4 120 59.2
Migut.L00277 Erythranthe guttata HOM05D000938 ORTHO05D001451 1.4e-23 113.2 121 52.9
CSS0009834 Camellia sinensis var. sinensis HOM05D000938 ORTHO05D001451 1.2e-22 110.2 121 51.2
Rhsim10G0127000 Rhododendron simsii HOM05D000938 ORTHO05D001451 2.0e-22 109.4 120 51.7
vmacro12751 Vaccinium macrocarpon HOM05D000938 ORTHO05D001451 2.6e-22 109.0 121 49.6
QL10p041154 Quercus lobata HOM05D000938 ORTHO05D001451 7.5e-22 107.5 119 48.7
Dinv29655 Davidia involucrata HOM05D000938 ORTHO05D001451 2.2e-21 105.9 120 47.5
Dinv12778 Davidia involucrata HOM05D000938 ORTHO05D001451 2.8e-21 105.5 107 51.4
CiPaw.04G079100 Carya illinoinensis HOM05D000938 ORTHO05D001451 4.8e-21 104.8 119 45.4
Cc02_g33890 Coffea canephora HOM05D000938 ORTHO05D001451 4.8e-21 104.8 118 48.3
Dinv36347 Davidia involucrata HOM05D000938 ORTHO05D001451 6.3e-21 104.4 120 49.2
Migut.L00579 Erythranthe guttata HOM05D000938 ORTHO05D001451 6.3e-21 104.4 115 52.2
Gohir.D04G033800 Gossypium hirsutum HOM05D000938 ORTHO05D001451 1.8e-20 102.8 110 48.2
Sabra05G0056000 Salix brachista HOM05D000938 ORTHO05D001451 5.3e-20 101.3 116 50.0
Duzib187G1406 Durio zibethinus HOM05D000938 ORTHO05D001451 7.0e-20 100.9 119 47.1
Gohir.A05G381500 Gossypium hirsutum HOM05D000938 ORTHO05D001451 7.0e-20 100.9 110 46.4
Gorai.012G038100 Gossypium raimondii HOM05D000938 ORTHO05D001451 9.1e-20 100.5 110 46.4
HanXRQChr10g0309421 Helianthus annuus HOM05D000938 ORTHO05D001451 1.2e-19 100.1 128 44.5
arahy.Tifrunner.gnm1.ann1.GX4ZEE Arachis hypogaea HOM05D000938 ORTHO05D001451 1.6e-19 99.8 110 50.9
PGR119G0365 Punica granatum HOM05D000938 ORTHO05D001451 1.6e-19 99.8 124 47.6
Sabra05G0056100 Salix brachista HOM05D000938 ORTHO05D001451 2.7e-19 99.0 116 48.3
arahy.Tifrunner.gnm1.ann1.Q4LS46 Arachis hypogaea HOM05D000938 ORTHO05D001451 3.5e-19 98.6 110 50.9
Glyma.05G194350 Glycine max HOM05D000938 ORTHO05D001451 5.9e-19 97.8 115 46.1
Potri.005G068700 Populus trichocarpa HOM05D000938 ORTHO05D001451 7.7e-19 97.4 119 44.5
Nitab4.5_0006396g0010 Nicotiana tabacum HOM05D000938 ORTHO05D001451 1.3e-18 96.7 118 44.9
Potri.007G100600 Populus trichocarpa HOM05D000938 ORTHO05D001451 1.3e-18 96.7 122 45.9
Lsat_1_v5_gn_5_82100 Lactuca sativa HOM05D000938 ORTHO05D001451 1.7e-18 96.3 127 43.3
SalBow7G1570 Salvia bowleyana HOM05D000938 ORTHO05D001451 1.7e-18 96.3 118 51.7
PGSC0003DMG400019873 Solanum tuberosum HOM05D000938 ORTHO05D001451 1.7e-18 96.3 118 46.6
VMungo0251G2900 Vigna mungo HOM05D000938 ORTHO05D001451 1.7e-18 96.3 113 46.0
Sopen02g011180 Solanum pennellii HOM05D000938 ORTHO05D001451 2.2e-18 95.9 117 47.9
Nn5g28429 Nelumbo nucifera HOM05D000938 ORTHO05D001451 3.8e-18 95.1 119 42.0
Solyc02g032850.3 Solanum lycopersicum HOM05D000938 ORTHO05D001451 6.5e-18 94.4 118 46.6
Ca_17622_v3 Cicer arietinum L. HOM05D000938 ORTHO05D001451 8.5e-18 94.0 110 50.0
ECA234G2409 Erigeron canadensis HOM05D000938 ORTHO05D001451 8.5e-18 94.0 128 42.2
CiPaw.03G117700 Carya illinoinensis HOM05D000938 ORTHO05D001451 1.5e-17 93.2 122 41.8
PGR119G1832 Punica granatum HOM05D000938 ORTHO05D001451 1.5e-17 93.2 127 44.9
Thecc.01G138600 Theobroma cacao HOM05D000938 ORTHO05D001451 1.5e-17 93.2 111 44.1
Lj4g0000059 Lotus japonicus HOM05D000938 ORTHO05D001451 1.9e-17 92.8 108 46.3
Manes.12G147100 Manihot esculenta HOM05D000938 ORTHO05D001451 1.9e-17 92.8 124 42.7
Glyma.08G002100 Glycine max HOM05D000938 ORTHO05D001451 2.5e-17 92.4 115 43.5
Duzib264G1224 Durio zibethinus HOM05D000938 ORTHO05D001451 4.2e-17 91.7 119 45.4
PGR102G2206 Punica granatum HOM05D000938 ORTHO05D001451 5.5e-17 91.3 126 43.7
Lalb_Chr07g0184261 Lupinus albus HOM05D000938 ORTHO05D001451 7.2e-17 90.9 112 48.2
Medtr0095s0080 Medicago truncatula HOM05D000938 ORTHO05D001451 7.2e-17 90.9 117 46.2
Phvul.002G274500 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 7.2e-17 90.9 115 44.3
Medtr8g494200 Medicago truncatula HOM05D000938 ORTHO05D001451 1.6e-16 89.7 111 47.7
arahy.Tifrunner.gnm1.ann1.YKDH6D Arachis hypogaea HOM05D000938 ORTHO05D001451 6.1e-16 87.8 111 43.2
COL.COLO4_12066 Corchorus olitorius HOM05D000938 ORTHO05D001451 6.1e-16 87.8 102 47.1
FAN23G2201 Fragaria x ananassa HOM05D000938 ORTHO05D001451 6.1e-16 87.8 134 43.3
FAN26G2282 Fragaria x ananassa HOM05D000938 ORTHO05D001451 6.1e-16 87.8 134 41.8
TWI75G1331 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 6.1e-16 87.8 109 45.9
Sabra07G0083200 Salix brachista HOM05D000938 ORTHO05D001451 8.0e-16 87.4 122 42.6
Actinidia06582 Actinidia chinensis HOM05D000938 ORTHO05D001451 3.0e-15 85.5 123 44.7
arahy.Tifrunner.gnm1.ann1.NKX1H6 Arachis hypogaea HOM05D000938 ORTHO05D001451 3.0e-15 85.5 118 42.4
Psat7g045480 Pisum sativum HOM05D000938 ORTHO05D001451 3.0e-15 85.5 100 47.0
Sc09g0002220 Simmondsia chinensis HOM05D000938 ORTHO05D001451 4.0e-15 85.1 127 42.5
FvH4_1g24940 Fragaria vesca HOM05D000938 ORTHO05D001451 5.2e-15 84.7 134 40.3
FAN19G2886 Fragaria x ananassa HOM05D000938 ORTHO05D001451 5.2e-15 84.7 134 40.3
TAR625G1159 Trochodendron aralioides HOM05D000938 ORTHO05D001451 5.2e-15 84.7 114 47.4
TWI75G1557 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 8.8e-15 84.0 103 46.6
Oeu008233.1 Olea europaea HOM05D000938 ORTHO05D001451 1.2e-14 83.6 109 45.9
Peaxi162Scf00331g01128 Petunia axillaris HOM05D000938 ORTHO05D001451 1.2e-14 83.6 117 41.0
Sed0022724 Sechium edule HOM05D000938 ORTHO05D001451 1.2e-14 83.6 121 41.3
arahy.Tifrunner.gnm1.ann1.RJ9TTJ Arachis hypogaea HOM05D000938 ORTHO05D001451 1.5e-14 83.2 111 42.3
Thecc.01G138400 Theobroma cacao HOM05D000938 ORTHO05D001451 1.5e-14 83.2 105 43.8
ClCG04G001930 Citrullus lanatus HOM05D000938 ORTHO05D001451 2.0e-14 82.8 122 41.0
MSTRG.2770 Avicennia marina HOM05D000938 ORTHO05D001451 3.4e-14 82.0 61 62.3
Cpa.g.sc37.13 Carica papaya HOM05D000938 ORTHO05D001451 3.4e-14 82.0 107 43.9
Phvul.009G154000 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 4.4e-14 81.6 116 43.1
Glyma.06G156300 Glycine max HOM05D000938 ORTHO05D001451 5.7e-14 81.3 118 43.2
Glyma.04G209700 Glycine max HOM05D000938 ORTHO05D001451 9.8e-14 80.5 118 42.4
Atru.chr4.1003 Acer truncatum HOM05D000938 ORTHO05D001451 1.3e-13 80.1 120 37.5
Lalb_Chr11g0068651 Lupinus albus HOM05D000938 ORTHO05D001451 1.3e-13 80.1 116 44.8
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 1.3e-13 80.1 114 39.5
arahy.Tifrunner.gnm1.ann1.KTYQ03 Arachis hypogaea HOM05D000938 ORTHO05D001451 1.7e-13 79.7 119 42.0
Aqoxy6G00324 Aquilegia oxysepala HOM05D000938 ORTHO05D001451 2.2e-13 79.3 124 41.1
MELO3C008938.2 Cucumis melo HOM05D000938 ORTHO05D001451 3.7e-13 78.6 123 41.5
MD15G1136300 Malus domestica HOM05D000938 ORTHO05D001451 3.7e-13 78.6 129 40.3
RcHm_v2.0_Chr2g0122591 Rosa chinensis HOM05D000938 ORTHO05D001451 3.7e-13 78.6 118 40.7
Manes.12G159500 Manihot esculenta HOM05D000938 ORTHO05D001451 4.8e-13 78.2 111 39.6
Ciclev10000576m.g Citrus clementina HOM05D000938 ORTHO05D001451 1.1e-12 77.0 124 38.7
CANSAT01G1052 Cannabis sativa HOM05D000938 ORTHO05D001451 1.4e-12 76.6 129 35.7
Ah.06g191090 Amaranthus hybridus HOM05D000938 ORTHO05D001451 2.4e-12 75.9 110 41.8
DCAR_019991 Daucus carota HOM05D000938 ORTHO05D001451 5.4e-12 74.7 120 38.3
Prupe.4G276500 Prunus persica HOM05D000938 ORTHO05D001451 5.4e-12 74.7 122 41.8
CsaV3_4G030710 Cucumis sativus L. HOM05D000938 ORTHO05D001451 1.2e-11 73.6 122 39.3
VMungo1309G0230 Vigna mungo HOM05D000938 ORTHO05D001451 1.2e-11 73.6 102 40.2
AUR62006871 Chenopodium quinoa HOM05D000938 ORTHO05D001451 2.9e-10 68.9 122 36.9
Nn1g08978 Nelumbo nucifera HOM05D000938 ORTHO05D001451 3.8e-10 68.6 114 37.7
GSVIVG01022328001 Vitis vinifera HOM05D000938 ORTHO05D001451 3.8e-10 68.6 121 35.5
EL10Ac4g09634 Beta vulgaris HOM05D000938 ORTHO05D001451 6.6e-10 67.8 112 37.5
AUR62000526 Chenopodium quinoa HOM05D000938 ORTHO05D001451 5.5e-09 64.7 109 38.5
Hund07231 Selenicereus undatus HOM05D000938 ORTHO05D001451 6.1e-08 61.2 114 36.8


User provided reference genes

Program Settings