Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 3.1e-163 578.6 323 100.0
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 3.8e-105 385.6 329 68.7
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 8.2e-100 367.9 334 69.5
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 8.5e-97 357.8 328 59.8
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 1.4e-94 350.5 221 75.6
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 2.3e-94 349.7 228 74.6
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 3.0e-94 349.4 218 75.7
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 6.8e-94 348.2 218 75.2
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 8.8e-94 347.8 212 75.9
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 4.4e-93 345.5 242 70.2
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 3.1e-91 339.3 240 66.2
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.1e-91 339.0 225 71.6
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 5.4e-91 338.6 220 72.3
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 1.2e-90 337.4 220 72.3
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 1.6e-90 337.0 241 68.5
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 2.0e-90 336.7 242 68.6
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 5.9e-90 335.1 225 70.7
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 3.8e-89 332.4 243 68.7
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 5.0e-89 332.0 211 73.9
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 8.6e-89 331.3 318 60.7
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 1.9e-88 330.1 239 68.6
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 4.2e-88 328.9 211 73.9
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.2e-88 328.9 217 72.4
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 5.5e-88 328.6 211 73.0
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 1.6e-87 327.0 210 73.3
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 6.1e-87 325.1 212 71.2
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 6.1e-87 325.1 211 73.5
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 6.1e-87 325.1 211 72.5
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 8.0e-87 324.7 211 73.0
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 1.0e-86 324.3 211 73.5
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 1.4e-86 323.9 211 74.9
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 1.4e-86 323.9 214 73.4
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.4e-86 323.9 211 73.0
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 5.2e-86 322.0 210 72.4
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 6.8e-86 321.6 211 70.6
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 8.9e-86 321.2 210 71.4
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.2e-85 320.9 210 71.9
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 2.0e-85 320.1 245 63.7
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 2.0e-85 320.1 210 72.4
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 3.4e-85 319.3 210 71.0
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 4.4e-85 318.9 240 66.2
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 4.4e-85 318.9 224 69.6
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 5.7e-85 318.5 212 72.2
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 9.8e-85 317.8 200 75.5
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 2.2e-84 316.6 242 63.6
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 2.8e-84 316.2 212 70.8
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.9e-84 315.5 221 70.1
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 6.3e-84 315.1 210 71.0
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 8.3e-84 314.7 210 69.5
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 1.1e-83 314.3 212 68.9
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 1.1e-83 314.3 239 66.5
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 1.4e-83 313.9 218 69.7
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 1.4e-83 313.9 218 69.7
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 1.8e-83 313.5 210 71.4
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 2.4e-83 313.2 238 66.0
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 4.1e-83 312.4 210 72.4
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 5.9e-82 308.5 214 69.2
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 1.0e-81 307.8 206 70.9
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 1.7e-81 307.0 248 60.1
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 2.3e-81 306.6 213 67.1
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 2.3e-81 306.6 195 75.4
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 2.5e-80 303.1 244 63.5
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 2.5e-80 303.1 211 68.2
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 6.1e-79 298.5 193 74.6
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 1.0e-78 297.7 206 69.9
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 1.0e-78 297.7 209 69.4
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 2.3e-78 296.6 244 62.3
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 6.8e-78 295.0 195 70.8
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 6.8e-78 295.0 193 74.1
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 1.5e-77 293.9 194 72.2
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 2.0e-77 293.5 258 60.9
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 2.6e-77 293.1 238 61.8
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 3.4e-77 292.7 211 64.9
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 4.4e-77 292.4 232 62.9
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 4.4e-77 292.4 210 66.7
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 1.4e-75 287.3 238 58.0
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 2.4e-75 286.6 288 52.4
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 3.2e-75 286.2 227 59.0
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 7.0e-75 285.0 208 65.9
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 3.5e-74 282.7 208 65.9
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 3.5e-74 282.7 210 63.3
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 1.0e-73 281.2 224 62.9
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 1.6e-71 273.9 211 63.0
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 3.6e-71 272.7 208 62.5
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 6.2e-71 271.9 203 62.6
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 1.8e-70 270.4 177 71.2
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 2.0e-69 266.9 173 71.1
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 2.6e-69 266.5 176 68.8
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 5.8e-69 265.4 212 62.7
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 8.3e-68 261.5 332 44.9
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 9.2e-67 258.1 207 58.9
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 8.6e-65 251.5 199 59.3
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 2.3e-62 243.4 212 55.7
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 5.8e-61 238.8 250 52.8
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 5.8e-61 238.8 250 52.8
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 1.2e-58 231.1 174 63.2
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 1.0e-57 228.0 254 48.4
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.2e-55 221.1 212 55.7
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 3.6e-55 219.5 145 69.0
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 6.2e-55 218.8 164 60.4
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 2.0e-53 213.8 128 75.8
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 2.1e-50 203.8 214 49.1
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.3e-49 201.1 123 74.0
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 6.6e-49 198.7 224 48.7
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 2.5e-48 196.8 187 55.1
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 4.0e-46 189.5 143 61.5
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.2e-45 188.0 159 57.2
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 3.8e-44 183.0 189 51.3
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 7.3e-40 168.7 132 58.3
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 9.0e-38 161.8 227 44.5
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 2.5e-32 143.7 80 83.8
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 2.5e-32 143.7 93 73.1
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 6.9e-30 135.6 86 70.9
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 2.4e-27 127.1 232 34.9
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 2.8e-23 113.6 66 81.8
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 1.3e-20 104.8 152 40.1
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 4.9e-20 102.8 60 83.3
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 4.2e-19 99.8 165 34.5
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 1.8e-17 94.4 175 34.9
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 1.9e-11 74.3 45 80.0
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 2.1e-10 70.9 51 62.7
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 2.5e-08 63.9 61 55.7
vmacro12756 Vaccinium macrocarpon HOM05D006516 ORTHO05D008083 5.3e-06 56.2 31 77.4


User provided reference genes

Program Settings