Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19596 Striga asiatica HOM05D008075 ORTHO05D010208 0.0e+00 1280.4 653 100.0
Migut.H00807 Erythranthe guttata HOM05D008075 ORTHO05D010208 9.4e-135 485.0 672 49.9
Oeu011019.1 Olea europaea HOM05D002427 ORTHO05D002818 4.6e-134 482.6 683 47.3
SalBow1G7185 Salvia bowleyana HOM05D008075 ORTHO05D010208 1.8e-133 480.7 719 46.3
Solyc08g080000.3 Solanum lycopersicum HOM05D008075 ORTHO05D010208 2.7e-110 403.7 692 42.6
Sopen08g028360 Solanum pennellii HOM05D008075 ORTHO05D010208 2.0e-108 397.5 691 41.8
PGSC0003DMG400022727 Solanum tuberosum HOM05D008075 ORTHO05D010208 1.8e-106 391.0 709 40.3
Nitab4.5_0005586g0040 Nicotiana tabacum HOM05D008075 ORTHO05D010208 3.8e-104 383.3 765 38.6
Dinv08171 Davidia involucrata HOM05D008075 ORTHO05D010208 1.7e-99 367.9 820 36.7
Cc02_g33950 Coffea canephora HOM05D008075 ORTHO05D010208 1.1e-98 365.2 775 36.6
Peaxi162Scf00658g00065 Petunia axillaris HOM05D008075 ORTHO05D010208 3.8e-96 356.7 754 36.7
Nitab4.5_0000947g0070 Nicotiana tabacum HOM05D008075 ORTHO05D010208 5.5e-95 352.8 757 37.8
MSTRG.23496 Avicennia marina HOM05D008075 ORTHO05D010208 5.9e-89 332.8 556 44.6
CSS0037312 Camellia sinensis var. sinensis HOM05D008075 ORTHO05D010208 1.4e-85 321.6 704 36.5
GSVIVG01022404001 Vitis vinifera HOM05D008075 ORTHO05D010208 4.4e-84 316.6 766 35.1
CAN.G630.6 Capsicum annuum HOM05D008075 ORTHO05D010208 1.0e-80 305.4 641 37.9
Rhsim08G0001000 Rhododendron simsii HOM05D008075 ORTHO05D010208 1.0e-80 305.4 797 34.1
TAR376G0152 Trochodendron aralioides HOM05D008075 ORTHO05D010208 5.1e-72 276.6 486 40.5
Potri.004G140000 Populus trichocarpa HOM05D008075 ORTHO05D010208 2.5e-71 274.2 404 43.8
TWI75G0788 Tripterygium wilfordii HOM05D008075 ORTHO05D010208 3.6e-70 270.4 766 32.4
Sabra04G0092100 Salix brachista HOM05D008075 ORTHO05D010208 6.2e-70 269.6 800 31.8
CiPaw.03G254600 Carya illinoinensis HOM05D008075 ORTHO05D010208 4.1e-66 256.9 465 39.6
MBI03_g11141_MAGBIO Magnolia biondii HOM05D008075 ORTHO05D010208 3.3e-63 247.3 316 50.3
QL10p040186 Quercus lobata HOM05D008075 ORTHO05D010208 3.3e-63 247.3 469 39.7
Nn1g08564 Nelumbo nucifera HOM05D008075 ORTHO05D010208 4.3e-63 246.9 244 57.8
Aqoxy2G00609 Aquilegia oxysepala HOM05D008075 ORTHO05D010208 1.2e-62 245.4 693 31.9
Manes.12G084200 Manihot esculenta HOM05D008075 ORTHO05D010208 5.2e-61 240.0 743 32.0
Medtr8g095160 Medicago truncatula HOM05D008075 ORTHO05D010208 2.6e-60 237.7 241 53.5
PSO782G2813 Papaver somniferum HOM05D008075 ORTHO05D010208 6.4e-59 233.0 399 41.6
Lsat_1_v5_gn_5_69300 Lactuca sativa HOM05D008075 ORTHO05D010208 1.1e-58 232.3 216 57.4
Ciclev10024878m.g Citrus clementina HOM05D008075 ORTHO05D010208 1.9e-58 231.5 500 36.2
PSO170G3563 Papaver somniferum HOM05D008075 ORTHO05D010208 5.4e-58 229.9 399 41.9
THA.LOC104819473 Tarenaya hassleriana HOM05D008075 ORTHO05D010208 7.1e-58 229.6 620 34.4
TPR.G33422 Trifolium pratense HOM05D008075 ORTHO05D010208 9.3e-58 229.2 247 51.8
Glyma.05G197100 Glycine max HOM05D008075 ORTHO05D010208 1.2e-57 228.8 237 55.3
Nn5g27987 Nelumbo nucifera HOM05D008075 ORTHO05D010208 4.6e-57 226.9 273 52.4
HanXRQChr15g0468991 Helianthus annuus HOM05D008075 ORTHO05D010208 1.3e-56 225.3 291 46.0
arahy.Tifrunner.gnm1.ann1.F3CBX5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.7e-56 224.9 324 45.4
ECA233G5565 Erigeron canadensis HOM05D008075 ORTHO05D010208 2.3e-56 224.6 703 32.6
Glyma.08G004500 Glycine max HOM05D008075 ORTHO05D010208 1.1e-55 222.2 255 51.4
Lj4g0013275 Lotus japonicus HOM05D008075 ORTHO05D010208 1.5e-55 221.9 246 51.2
VMungo0251G2353 Vigna mungo HOM05D008075 ORTHO05D010208 2.5e-55 221.1 222 55.4
Sc09g0004370 Simmondsia chinensis HOM05D008075 ORTHO05D010208 9.6e-55 219.2 220 54.5
arahy.Tifrunner.gnm1.ann1.BIR6X5 Arachis hypogaea HOM05D008075 ORTHO05D010208 1.6e-54 218.4 341 43.7
Phvul.002G277500 Phaseolus vulgaris HOM05D008075 ORTHO05D010208 1.6e-54 218.4 237 51.1
HPP92_002184 Vanilla planifolia HOM05D008075 ORTHO05D010208 1.1e-53 215.7 215 56.3
Psat7g041720 Pisum sativum HOM05D008075 ORTHO05D010208 2.4e-53 214.5 397 39.5
Ca_17596_v3 Cicer arietinum L. HOM05D000484 ORTHO05D010208 2.2e-51 208.0 351 38.7
Os03g0703300 Oryza sativa ssp. japonica HOM05D008075 ORTHO05D010208 4.9e-51 206.8 444 35.4
ATR0171G010 Amborella trichopoda HOM05D008075 ORTHO05D010208 1.9e-50 204.9 215 53.5
Zm00001eb054280 Zea mays HOM05D008075 ORTHO05D010208 5.4e-50 203.4 244 48.8
EL10Ac4g08956 Beta vulgaris HOM05D008075 ORTHO05D010208 7.1e-50 203.0 743 28.1
Hund06889 Selenicereus undatus HOM05D008075 ORTHO05D010208 3.5e-49 200.7 309 43.0
AUR62039042 Chenopodium quinoa HOM05D008075 ORTHO05D010208 1.0e-48 199.1 299 42.8
Ah.06g191710 Amaranthus hybridus HOM05D008075 ORTHO05D010208 1.6e-46 191.8 276 42.4
Lalb_Chr12g0202841 Lupinus albus HOM05D008075 ORTHO05D010208 6.2e-46 189.9 556 32.6
AUR62004796 Chenopodium quinoa HOM05D008075 ORTHO05D010208 1.1e-39 169.1 312 38.1
SEGI_31365 Sequoiadendron giganteum HOM05D008075 ORTHO05D010208 7.6e-36 156.4 240 41.7
SMO266G0073 Selaginella moellendorffii HOM05D008075 ORTHO05D010208 6.7e-32 143.3 192 46.4
Mapoly0089s0038 Marchantia polymorpha HOM05D008075 ORTHO05D010208 4.5e-28 130.6 166 41.6
Pp3c6_3110 Physcomitrium patens HOM05D008075 ORTHO05D010208 9.3e-26 122.9 221 35.3
Nn5g27981 Nelumbo nucifera HOM05D008075 ORTHO05D010208 4.6e-25 120.6 100 64.0
Pp3c6_900 Physcomitrium patens HOM05D008075 ORTHO05D010208 3.3e-23 114.4 207 35.3
Pp3c6_920 Physcomitrium patens HOM05D008075 ORTHO05D010208 3.3e-23 114.4 207 35.3
Pp3c16_21630 Physcomitrium patens HOM05D008075 ORTHO05D010208 4.1e-21 107.5 221 35.3
AagrBONN_evm.TU.Sc2ySwM_362.1056 Anthoceros agrestis HOM05D008075 ORTHO05D010208 7.7e-12 76.6 139 34.5
CBR_g31168 Chara braunii HOM05D008075 ORTHO05D010208 1.7e-11 75.5 145 32.4
VMungo0251G2339 Vigna mungo HOM05D008075 ORTHO05D010208 2.5e-10 71.6 69 55.1
HanXRQChr07g0199571 Helianthus annuus HOM05D008075 ORTHO05D010208 1.2e-09 69.3 46 67.4
CBR_g10951 Chara braunii HOM05D008075 ORTHO05D010208 5.1e-08 63.9 150 28.0
Nn5g28099 Nelumbo nucifera HOM05D004492 ORTHO05D005602 6.7e-08 63.5 84 46.4
HanXRQChr10g0307451 Helianthus annuus HOM05D008075 ORTHO05D010208 8.8e-08 63.2 47 61.7


User provided reference genes

Program Settings