Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19532 Striga asiatica HOM05D004733 ORTHO05D005925 0.0e+00 1259.6 628 100.0
MSTRG.23523 Avicennia marina HOM05D004733 ORTHO05D005925 1.1e-281 973.0 673 72.8
SalBow2G0826 Salvia bowleyana HOM05D004733 ORTHO05D005925 1.2e-275 953.0 669 71.2
Migut.H00986 Erythranthe guttata HOM05D004733 ORTHO05D005925 2.3e-271 938.7 672 71.1
Oeu017201.1 Olea europaea HOM05D004733 ORTHO05D005925 3.2e-241 838.6 716 60.5
Cc03_g11520 Coffea canephora HOM05D004733 ORTHO05D005925 1.7e-221 773.1 670 56.7
Nitab4.5_0001385g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 9.1e-220 767.3 668 57.2
Solyc02g085230.3 Solanum lycopersicum HOM05D004733 ORTHO05D005925 6.5e-218 761.1 670 56.7
Sopen02g029930 Solanum pennellii HOM05D004733 ORTHO05D005925 2.5e-217 759.2 670 56.6
Actinidia36563 Actinidia chinensis HOM05D004733 ORTHO05D005925 4.7e-216 755.0 667 55.9
Peaxi162Scf00366g00125 Petunia axillaris HOM05D004733 ORTHO05D005925 4.7e-216 755.0 669 56.8
CSS0026274 Camellia sinensis var. sinensis HOM05D004733 ORTHO05D005925 3.1e-212 742.3 666 55.6
Nitab4.5_0000178g0060 Nicotiana tabacum HOM05D004733 ORTHO05D005925 5.3e-212 741.5 596 60.2
Atru.chr3.583 Acer truncatum HOM05D004733 ORTHO05D005925 3.0e-207 725.7 672 54.3
Rhsim02G0060300 Rhododendron simsii HOM05D004733 ORTHO05D005925 9.1e-204 714.1 746 50.1
GSVIVG01018952001 Vitis vinifera HOM05D004733 ORTHO05D005925 2.7e-203 712.6 678 53.8
MD02G1146900 Malus domestica HOM05D004733 ORTHO05D005925 1.2e-198 697.2 666 54.1
Nn5g29624 Nelumbo nucifera HOM05D004733 ORTHO05D005925 1.2e-198 697.2 664 53.8
Manes.02G094400 Manihot esculenta HOM05D004733 ORTHO05D005925 5.7e-198 694.9 668 53.6
FAN19G0915 Fragaria x ananassa HOM05D004733 ORTHO05D005925 7.5e-198 694.5 659 53.4
Prupe.7G155300 Prunus persica HOM05D004733 ORTHO05D005925 1.1e-196 690.6 663 53.2
Cfa004311 Carpinus fangiana HOM05D004733 ORTHO05D005925 2.4e-196 689.5 668 53.3
FvH4_1g13250 Fragaria vesca HOM05D004733 ORTHO05D005925 4.1e-196 688.7 663 52.8
Ciclev10024776m.g Citrus clementina HOM05D004733 ORTHO05D005925 9.1e-196 687.6 671 52.6
RcHm_v2.0_Chr2g0101431 Rosa chinensis HOM05D004733 ORTHO05D005925 3.5e-195 685.6 665 52.3
Dinv39990 Davidia involucrata HOM05D004733 ORTHO05D005925 5.9e-195 684.9 692 52.5
Aqoxy6G01122 Aquilegia oxysepala HOM05D004733 ORTHO05D005925 1.0e-194 684.1 686 51.0
Cpa.g.sc6.117 Carica papaya HOM05D004733 ORTHO05D005925 2.9e-194 682.6 675 52.0
CiPaw.02G018200 Carya illinoinensis HOM05D004733 ORTHO05D005925 9.5e-193 677.6 660 50.9
arahy.Tifrunner.gnm1.ann1.VZ5KK1 Arachis hypogaea HOM05D004733 ORTHO05D005925 2.8e-192 676.0 669 51.9
arahy.Tifrunner.gnm1.ann1.6U5FTL Arachis hypogaea HOM05D004733 ORTHO05D005925 4.7e-192 675.2 669 51.7
Sc03g0003000 Simmondsia chinensis HOM05D004733 ORTHO05D005925 6.8e-191 671.4 663 51.9
Potri.007G024600 Populus trichocarpa HOM05D004733 ORTHO05D005925 2.6e-190 669.5 668 51.2
arahy.Tifrunner.gnm1.ann1.VB3WEH Arachis hypogaea HOM05D004733 ORTHO05D005925 3.4e-190 669.1 673 51.4
vmacro15553 Vaccinium macrocarpon HOM05D004733 ORTHO05D005925 3.4e-190 669.1 718 49.9
Glyma.01G176400 Glycine max HOM05D004733 ORTHO05D005925 2.8e-189 666.0 663 51.7
Gohir.D11G190600 Gossypium hirsutum HOM05D004733 ORTHO05D005925 2.4e-188 662.9 667 53.1
EL10Ac6g15557 Beta vulgaris HOM05D004733 ORTHO05D005925 5.4e-188 661.8 643 51.2
Lalb_Chr16g0377811 Lupinus albus HOM05D004733 ORTHO05D005925 7.0e-188 661.4 682 51.2
AUR62004057 Chenopodium quinoa HOM05D004733 ORTHO05D005925 9.2e-188 661.0 621 53.0
Gorai.007G203100 Gossypium raimondii HOM05D004733 ORTHO05D005925 2.7e-187 659.4 667 52.9
Lj1g0005862 Lotus japonicus HOM05D004733 ORTHO05D005925 5.9e-187 658.3 672 50.9
Lj4A201T52 Lonicera japonica HOM05D004733 ORTHO05D005925 1.0e-186 657.5 745 47.2
THA.LOC104809497 Tarenaya hassleriana HOM05D004733 ORTHO05D005925 1.0e-186 657.5 674 50.3
Thecc.01G034700 Theobroma cacao HOM05D004733 ORTHO05D005925 1.0e-186 657.5 667 52.0
AL2G11330 Arabidopsis lyrata HOM05D004733 ORTHO05D005925 1.3e-186 657.1 667 50.7
Glyma.11G068600 Glycine max HOM05D004733 ORTHO05D005925 1.7e-186 656.8 663 50.7
CANSAT78G0304 Cannabis sativa HOM05D004733 ORTHO05D005925 2.3e-186 656.4 660 51.2
PSO675G5282 Papaver somniferum HOM05D004733 ORTHO05D005925 3.8e-186 655.6 676 49.1
PGR119G1063 Punica granatum HOM05D004733 ORTHO05D005925 3.8e-186 655.6 663 50.8
Sp7g34280 Schrenkiella parvula HOM05D004733 ORTHO05D005925 3.8e-186 655.6 662 50.8
VMungo1215G0507 Vigna mungo HOM05D004733 ORTHO05D005925 3.8e-186 655.6 659 50.4
Phvul.002G030700 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 1.1e-185 654.1 661 50.7
AT1G63810 Arabidopsis thaliana HOM05D004733 ORTHO05D005925 1.5e-185 653.7 668 50.7
BolC3t20259H Brassica oleracea HOM05D004733 ORTHO05D005925 1.9e-185 653.3 666 50.6
Carub.0002s0104 Capsella rubella HOM05D004733 ORTHO05D005925 1.9e-185 653.3 667 49.5
Gohir.A11G184100 Gossypium hirsutum HOM05D004733 ORTHO05D005925 1.2e-184 650.6 667 52.0
C03p80050 Brassica napus HOM05D004733 ORTHO05D005925 1.6e-184 650.2 666 50.6
PSO541G3573 Papaver somniferum HOM05D004733 ORTHO05D005925 1.6e-184 650.2 676 48.8
Medtr5g020190 Medicago truncatula HOM05D004733 ORTHO05D005925 4.7e-184 648.7 664 49.5
Psat2g159520 Pisum sativum HOM05D004733 ORTHO05D005925 4.7e-184 648.7 663 49.8
Hund16432 Selenicereus undatus HOM05D004733 ORTHO05D005925 4.7e-184 648.7 659 50.1
unitig_21.g20953 Utricularia gibba HOM05D004733 ORTHO05D005925 6.1e-184 648.3 675 53.5
MELO3C022270.2 Cucumis melo HOM05D004733 ORTHO05D005925 1.8e-183 646.7 672 50.9
Duzib187G1802 Durio zibethinus HOM05D004733 ORTHO05D005925 2.0e-182 643.3 667 51.4
Thhalv10024292m.g Eutrema salsugineum HOM05D004733 ORTHO05D005925 2.0e-182 643.3 667 49.6
COL.COLO4_08906 Corchorus olitorius HOM05D004733 ORTHO05D005925 2.6e-182 642.9 667 51.6
CARHR047390 Cardamine hirsuta HOM05D004733 ORTHO05D005925 4.4e-182 642.1 668 50.4
QL04p047829 Quercus lobata HOM05D004733 ORTHO05D005925 5.8e-182 641.7 695 51.1
BcaC01g00457 Brassica carinata HOM05D004733 ORTHO05D005925 2.2e-181 639.8 665 50.2
A08p22270 Brassica napus HOM05D004733 ORTHO05D005925 2.9e-181 639.4 666 49.4
BraA08t34186Z Brassica rapa HOM05D004733 ORTHO05D005925 3.7e-181 639.0 666 49.4
CsaV3_5G036970 Cucumis sativus L. HOM05D004733 ORTHO05D005925 3.7e-181 639.0 672 50.1
CsaV3_6G008550 Cucumis sativus L. HOM05D004733 ORTHO05D005925 8.3e-181 637.9 663 50.8
AUR62007571 Chenopodium quinoa HOM05D004733 ORTHO05D005925 1.4e-180 637.1 654 49.5
Sed0013525 Sechium edule HOM05D004733 ORTHO05D005925 2.7e-179 632.9 674 49.3
ClCG06G002580 Citrullus lanatus HOM05D004733 ORTHO05D005925 7.8e-179 631.3 679 49.9
FAN23G1660 Fragaria x ananassa HOM05D004733 ORTHO05D005925 1.0e-178 630.9 659 50.2
ECA232G2226 Erigeron canadensis HOM05D004733 ORTHO05D005925 1.7e-178 630.2 667 49.0
MBI14_g08060_MAGBIO Magnolia biondii HOM05D004733 ORTHO05D005925 8.6e-178 627.9 641 49.8
Hma1.2p1_0789F.1_g218390 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 1.2e-176 624.0 507 60.4
Ah.03g140900 Amaranthus hybridus HOM05D004733 ORTHO05D005925 1.3e-173 614.0 655 46.6
Lsat_1_v5_gn_4_152020 Lactuca sativa HOM05D004733 ORTHO05D005925 4.9e-173 612.1 661 49.2
HanXRQChr09g0261511 Helianthus annuus HOM05D004733 ORTHO05D005925 5.4e-172 608.6 663 48.1
TWI77G0475 Tripterygium wilfordii HOM05D004733 ORTHO05D005925 7.0e-172 608.2 663 49.2
Hma1.2p1_0789F.1_g218380 Hydrangea macrophylla HOM05D004733 ORTHO05D005925 3.3e-169 599.4 675 49.2
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.8e-168 596.3 684 45.9
FAN28G2014 Fragaria x ananassa HOM05D004733 ORTHO05D005925 5.4e-164 582.0 657 47.5
ATR0665G204 Amborella trichopoda HOM05D004733 ORTHO05D005925 2.0e-158 563.5 659 44.9
Ca_24849_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 2.6e-158 563.1 663 45.1
Zm00001eb139270 Zea mays HOM05D004733 ORTHO05D005925 9.9e-158 561.2 619 45.9
DCAR_017293 Daucus carota HOM05D004733 ORTHO05D005925 6.4e-157 558.5 663 46.8
TAR625G0290 Trochodendron aralioides HOM05D004733 ORTHO05D005925 3.9e-154 549.3 675 44.9
Sabra07G0021700 Salix brachista HOM05D004733 ORTHO05D005925 1.6e-152 543.9 713 43.2
BcaNung05455 Brassica carinata HOM05D004733 ORTHO05D005925 6.9e-151 538.5 522 52.3
SEGI_35015 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 3.8e-149 532.7 665 43.6
A05p29760 Brassica napus HOM05D004733 ORTHO05D005925 2.7e-139 500.0 545 48.1
A05p29530 Brassica napus HOM05D004733 ORTHO05D005925 4.6e-139 499.2 587 46.0
Haze_15084 Corylus avellana HOM05D004733 ORTHO05D005925 1.0e-138 498.0 432 56.7
SHI09115 Sapria himalayana HOM05D004733 ORTHO05D005925 1.1e-135 488.0 596 44.5
Aa31LG3G3780 Aethionema arabicum HOM05D004733 ORTHO05D005925 3.4e-134 483.0 504 48.8
Eucgr.I02440 Eucalyptus grandis HOM05D004733 ORTHO05D005925 5.8e-134 482.3 471 51.6
Pp3c6_25920 Physcomitrium patens HOM05D004733 ORTHO05D005925 3.7e-128 463.0 663 40.3
Mapoly0060s0020 Marchantia polymorpha HOM05D004733 ORTHO05D005925 2.3e-114 417.2 660 36.5
CAN.G358.87 Capsicum annuum HOM05D004733 ORTHO05D005925 6.3e-112 409.1 331 58.3
CAN.G3433.1 Capsicum annuum HOM05D004733 ORTHO05D005925 1.1e-111 408.3 331 58.3
CAN.G358.91 Capsicum annuum HOM05D004733 ORTHO05D005925 1.7e-109 401.0 354 56.5
Os12g0166500 Oryza sativa ssp. japonica HOM05D004733 ORTHO05D005925 4.4e-105 386.3 447 45.9
HPP92_009474 Vanilla planifolia HOM05D004733 ORTHO05D005925 1.3e-104 384.8 663 36.3
TPR.G8389 Trifolium pratense HOM05D004733 ORTHO05D005925 1.2e-102 378.3 344 54.9
SMO347G0575 Selaginella moellendorffii HOM05D004733 ORTHO05D005925 9.1e-95 352.1 585 35.9
CBR_g37736 Chara braunii HOM05D004733 ORTHO05D000048 4.0e-82 310.1 632 32.0
SEGI_33720 Sequoiadendron giganteum HOM05D004733 ORTHO05D005925 3.0e-74 283.9 349 43.3
AagrBONN_evm.TU.Sc2ySwM_228.918 Anthoceros agrestis HOM05D004733 ORTHO05D005925 4.4e-73 280.0 444 36.5
QL02p065465 Quercus lobata HOM05D004733 ORTHO05D005925 7.5e-73 279.3 273 51.3
TPR.G22288 Trifolium pratense HOM05D004733 ORTHO05D005925 8.3e-72 275.8 292 46.6
QL06p046231 Quercus lobata HOM05D004733 ORTHO05D005925 1.2e-70 271.9 345 42.3
Actinidia12125 Actinidia chinensis HOM05D004733 ORTHO05D005925 9.5e-68 262.3 194 62.9
MCO15G114 Micromonas commoda HOM05D004733 ORTHO05D005925 3.9e-53 213.8 577 27.2
arahy.Tifrunner.gnm1.ann1.VLQ9MW Arachis hypogaea HOM05D004733 ORTHO05D005925 4.3e-52 210.3 243 48.6
arahy.Tifrunner.gnm1.ann1.T3TR42 Arachis hypogaea HOM05D004733 ORTHO05D005925 2.3e-50 204.5 242 45.9
C07p61790 Brassica napus HOM05D004733 ORTHO05D005925 3.2e-47 194.1 306 39.5
Cre07.g332800 Chlamydomonas reinhardtii HOM05D004733 ORTHO05D005925 7.1e-47 193.0 753 25.6
Ca_24844_v3 Cicer arietinum L. HOM05D004733 ORTHO05D005925 1.0e-45 189.1 291 40.2
Phvul.011G118815 Phaseolus vulgaris HOM05D004733 ORTHO05D005925 7.6e-41 172.9 152 48.7
Cfa025732 Carpinus fangiana HOM05D004733 ORTHO05D005925 3.2e-31 141.0 625 23.4
AagrBONN_evm.TU.Sc2ySwM_228.917 Anthoceros agrestis HOM05D004733 ORTHO05D005925 2.8e-27 127.9 184 39.7
MD15G1261100 Malus domestica HOM05D004733 ORTHO05D005925 3.4e-25 120.9 159 44.7
PRCOL_00003562 Prasinoderma coloniale HOM05D004733 ORTHO05D005925 5.8e-25 120.2 642 24.3
Haze_15083 Corylus avellana HOM05D004733 ORTHO05D005925 6.7e-21 106.7 83 61.4
QL06p046242 Quercus lobata HOM05D004733 ORTHO05D005925 8.1e-19 99.8 99 54.5
RcHm_v2.0_Chr5g0064711 Rosa chinensis HOM05D004733 ORTHO05D005925 7.9e-14 83.2 170 30.0
C05p48270 Brassica napus HOM05D004733 ORTHO05D005925 1.6e-11 75.5 104 38.5
Aa31LG3G3770 Aethionema arabicum HOM05D004733 ORTHO05D005925 1.8e-10 72.0 116 41.4


User provided reference genes

Program Settings