Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19528 Striga asiatica HOM05D016034 ORTHO05D000013 3.1e-198 695.3 448 100.0
SGA_v2.0_scaffold10G05218 Striga asiatica HOM05D016034 ORTHO05D000013 2.5e-78 297.0 286 70.6
SGA_v2.0_scaffold13G06337 Striga asiatica HOM05D016034 ORTHO05D000013 2.0e-56 224.2 247 66.4
SGA_v2.0_scaffold17G08172 Striga asiatica HOM05D016034 ORTHO05D000013 1.6e-53 214.5 242 66.5
SGA_v2.0_scaffold39G15190 Striga asiatica HOM05D016034 ORTHO05D403530 1.5e-43 181.4 119 76.5
SGA_v2.0_scaffold68G22893 Striga asiatica HOM05D016034 ORTHO05D009378 9.9e-19 99.0 75 85.3
SGA_v2.0_scaffold205G41701 Striga asiatica HOM05D016034 ORTHO05D000013 1.5e-14 85.1 203 58.1
SGA_v2.0_scaffold39G15191 Striga asiatica HOM05D000017 ORTHO05D000013 2.0e-11 74.7 94 50.0
vmacro04520 Vaccinium macrocarpon HOM05D004245 ORTHO05D004783 7.1e-09 66.2 59 57.6
SGA_v2.0_scaffold74G24608 Striga asiatica HOM05D016034 ORTHO05D406663 2.1e-08 64.7 75 96.0
SGA_v2.0_scaffold12G06132 Striga asiatica HOM05D019301 ORTHO05D399269 4.6e-08 63.5 130 33.1
SGA_v2.0_scaffold12G06208 Striga asiatica HOM05D019301 ORTHO05D402788 4.6e-08 63.5 130 33.1
SGA_v2.0_scaffold3G01574 Striga asiatica HOM05D019301 ORTHO05D000013 4.6e-08 63.5 130 33.1
Sabra02G0198600 Salix brachista HOM05D004245 ORTHO05D004783 7.9e-08 62.8 48 66.7
Peaxi162Scf00225g00127 Petunia axillaris HOM05D004245 ORTHO05D004783 2.3e-07 61.2 79 48.1
Sabra04G0142000 Salix brachista HOM05D004298 ORTHO05D006236 2.3e-07 61.2 52 61.5
vmacro21634 Vaccinium macrocarpon HOM05D004245 ORTHO05D004783 3.9e-07 60.5 35 74.3
Rhsim07G0237700 Rhododendron simsii HOM05D004245 ORTHO05D004783 5.1e-07 60.1 34 79.4
Sed0016726 Sechium edule HOM05D004245 ORTHO05D004783 6.7e-07 59.7 45 64.4
Aqoxy2G01756 Aquilegia oxysepala HOM05D004245 ORTHO05D004783 8.7e-07 59.3 30 96.7
EL10Ac5g11904 Beta vulgaris HOM05D004245 ORTHO05D004783 1.1e-06 58.9 30 90.0
CAN.G134.178 Capsicum annuum HOM05D004245 ORTHO05D004783 1.1e-06 58.9 40 67.5
Oeu049959.1 Olea europaea HOM05D004245 ORTHO05D004783 1.1e-06 58.9 30 93.3
Oeu049960.1 Olea europaea HOM05D004245 ORTHO05D004783 1.1e-06 58.9 30 93.3
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 1.1e-06 58.9 50 58.0
Dinv36073 Davidia involucrata HOM05D004245 ORTHO05D004783 1.5e-06 58.5 30 90.0
Lj4A41T61 Lonicera japonica HOM05D004245 ORTHO05D004783 1.5e-06 58.5 30 90.0
Manes.18G027901 Manihot esculenta HOM05D004245 ORTHO05D004783 1.5e-06 58.5 31 87.1
Peaxi162Scf00037g01715 Petunia axillaris HOM05D004245 ORTHO05D004783 1.5e-06 58.5 31 83.9
SGA_v2.0_scaffold326G48710 Striga asiatica HOM05D004245 ORTHO05D004783 1.5e-06 58.5 32 87.5
MSTRG.1283 Avicennia marina HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 93.3
FvH4_2g39911 Fragaria vesca HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 86.7
MD08G1034400 Malus domestica HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 86.7
MD15G1031300 Malus domestica HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 86.7
Prupe.1G380600 Prunus persica HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 86.7
RcHm_v2.0_Chr6g0300871 Rosa chinensis HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 86.7
Sopen01g041550 Solanum pennellii HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 86.7
PGSC0003DMG400022502 Solanum tuberosum HOM05D004245 ORTHO05D004783 1.9e-06 58.2 30 86.7
Psat5g146640 Pisum sativum HOM05D004245 ORTHO05D004783 2.5e-06 57.8 30 90.0
QL02p008410 Quercus lobata HOM05D004245 ORTHO05D004783 3.3e-06 57.4 30 90.0
Cpa.g.sc36.67 Carica papaya HOM05D004245 ORTHO05D004783 4.3e-06 57.0 30 86.7
Oeu056187.1 Olea europaea HOM05D004245 ORTHO05D004783 4.3e-06 57.0 30 90.0
GSVIVG01009696001 Vitis vinifera HOM05D004245 ORTHO05D004783 4.3e-06 57.0 30 86.7
Cfa018144 Carpinus fangiana HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 86.7
CiPaw.15G077400 Carya illinoinensis HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 86.7
Ciclev10002428m.g Citrus clementina HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 86.7
Cc10_g03000 Coffea canephora HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 86.7
Gohir.A05G194800 Gossypium hirsutum HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 90.0
Gohir.D05G198000 Gossypium hirsutum HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 90.0
Gorai.009G203100 Gossypium raimondii HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 90.0
MD08G1034500 Malus domestica HOM05D004245 ORTHO05D004783 5.6e-06 56.6 31 80.6
Oeu029863.1 Olea europaea HOM05D004245 ORTHO05D004783 5.6e-06 56.6 30 90.0
Migut.N00497 Erythranthe guttata HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 83.3
Nitab4.5_0002361g0180 Nicotiana tabacum HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 83.3
Nitab4.5_0002840g0080 Nicotiana tabacum HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 83.3
Solyc01g100030.5.1 Solanum lycopersicum HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 83.3
Sopen01g043550 Solanum pennellii HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 83.3
PGSC0003DMG400024725 Solanum tuberosum HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 83.3
Thecc.08G025300 Theobroma cacao HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 86.7
TPR.G37404 Trifolium pratense HOM05D004245 ORTHO05D004783 7.4e-06 56.2 30 90.0
Cfa018886 Carpinus fangiana HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 86.7
Lsat_1_v5_gn_5_29181 Lactuca sativa HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 83.3
QL02p008145 Quercus lobata HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 90.0
Solyc01g097970.4 Solanum lycopersicum HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 83.3
THA.LOC104813208 Tarenaya hassleriana HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 83.3
TWI12G0235 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 90.0
TWI56G0048 Tripterygium wilfordii HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 90.0
TAR365G0431 Trochodendron aralioides HOM05D004245 ORTHO05D004783 9.6e-06 55.8 30 83.3


User provided reference genes

Program Settings