Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.1e-184 649.8 331 100.0
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 6.4e-140 501.1 336 73.8
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 8.4e-140 500.7 334 74.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 6.6e-137 491.1 326 73.9
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 4.3e-128 461.8 320 69.7
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 4.0e-126 455.3 320 66.6
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 9.0e-126 454.1 334 67.1
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 3.4e-125 452.2 320 67.8
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.4e-125 451.8 320 67.8
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 1.7e-124 449.9 320 67.2
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 2.2e-124 449.5 320 65.6
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.2e-124 449.5 335 66.0
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 8.4e-124 447.6 332 66.0
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 1.4e-123 446.8 326 66.0
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.2e-123 445.3 320 66.9
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 5.4e-123 444.9 319 65.8
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.2e-122 443.7 335 63.3
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.6e-122 443.4 320 66.9
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.6e-122 443.4 334 65.6
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.5e-122 442.2 319 66.5
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 4.6e-122 441.8 319 66.1
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 4.6e-122 441.8 321 66.0
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 4.6e-122 441.8 320 66.2
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 6.0e-122 441.4 320 66.6
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 6.0e-122 441.4 325 65.2
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 6.0e-122 441.4 335 64.2
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.7e-121 439.9 320 66.2
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 2.3e-121 439.5 320 65.9
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 2.3e-121 439.5 320 66.6
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 3.0e-121 439.1 320 66.6
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.9e-121 438.7 326 64.7
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.9e-121 438.7 319 65.2
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 5.1e-121 438.3 326 64.1
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 8.7e-121 437.6 319 67.4
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.5e-120 436.8 316 68.4
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.9e-120 436.4 312 67.3
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.9e-120 436.4 319 66.8
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.5e-120 436.0 326 64.4
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 4.3e-120 435.3 320 66.2
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 7.4e-120 434.5 318 65.1
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 9.6e-120 434.1 332 63.6
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 9.6e-120 434.1 326 63.8
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.3e-119 433.7 320 66.2
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.3e-119 433.7 320 65.9
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 3.6e-119 432.2 327 64.2
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 4.8e-119 431.8 320 64.7
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 4.8e-119 431.8 320 64.7
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 6.2e-119 431.4 327 63.9
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.1e-118 430.6 326 63.2
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.1e-118 430.6 325 63.7
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 1.4e-118 430.3 320 65.0
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.1e-118 429.1 327 63.9
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.0e-118 428.7 320 64.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.0e-117 426.4 317 64.0
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 2.6e-117 426.0 330 64.2
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.4e-117 425.6 327 63.6
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 5.8e-117 424.9 334 62.6
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 7.6e-117 424.5 327 63.6
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 9.9e-117 424.1 320 64.7
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 9.9e-117 424.1 331 63.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 9.9e-117 424.1 327 63.6
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.3e-116 423.7 312 66.0
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 2.2e-116 422.9 319 63.6
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 1.1e-115 420.6 319 63.3
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 2.4e-115 419.5 317 63.1
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 3.2e-115 419.1 321 62.9
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 7.1e-115 417.9 317 63.1
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 7.1e-115 417.9 317 63.1
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 7.1e-115 417.9 317 63.1
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.2e-114 417.2 317 62.8
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.2e-114 417.2 321 63.9
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 4.6e-114 415.2 317 62.5
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 4.6e-114 415.2 317 62.5
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 4.6e-114 415.2 317 62.5
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 1.3e-113 413.7 317 63.1
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.3e-113 413.7 320 62.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.3e-113 413.7 327 61.2
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.3e-113 412.9 320 61.9
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 4.8e-111 405.2 318 61.0
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 6.2e-111 404.8 317 61.5
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 6.2e-111 404.8 314 61.8
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 8.1e-111 404.4 322 61.5
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.1e-110 402.5 315 61.9
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.2e-109 400.6 320 61.2
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.2e-109 400.6 293 64.8
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.1e-106 389.8 319 60.8
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 2.1e-106 389.8 336 60.4
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.3e-103 380.6 320 60.6
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.4e-102 377.1 317 60.9
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 1.6e-95 353.6 306 57.2
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 3.8e-92 342.4 324 55.2
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 5.0e-92 342.0 306 54.2
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.6e-90 337.0 286 57.7
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 2.9e-84 316.2 327 48.9
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 8.8e-81 304.7 306 51.6
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.3e-79 300.8 309 51.5
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.5e-77 292.7 207 66.2
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.5e-75 286.6 239 59.8
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.5e-72 277.3 204 63.2
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 4.5e-69 265.8 198 66.7
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 1.8e-65 253.8 177 67.8
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.1e-62 244.6 191 61.8
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.7e-61 238.4 160 69.4
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.4e-57 227.6 157 66.9
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.7e-52 210.7 285 43.2
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.9e-51 207.2 132 72.0
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.2e-50 204.5 243 49.8
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.3e-47 191.8 157 59.9
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 5.2e-41 172.6 138 60.1
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-36 157.9 121 66.1
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.5e-35 153.7 129 62.0
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 5.8e-32 142.5 89 70.8
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.2e-23 114.0 111 55.0
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.1e-19 101.7 103 49.5
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.8e-17 94.4 214 32.2
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 1.7e-15 87.8 87 57.5
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 2.9e-15 87.0 175 30.9
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.9e-14 84.3 72 52.8
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.7e-12 77.8 192 31.2
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 1.7e-07 61.2 213 27.7


User provided reference genes

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