Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19517 Striga asiatica HOM05D007221 ORTHO05D009204 9.6e-56 219.9 112 100.0
SGA_v2.0_scaffold111G31495 Striga asiatica HOM05D007221 ORTHO05D009204 4.1e-14 81.6 106 52.8
SalBow7G4300 Salvia bowleyana HOM05D007221 ORTHO05D009204 2.1e-10 69.3 62 64.5
Oeu063754.1 Olea europaea HOM05D007221 ORTHO05D009204 4.0e-09 65.1 69 53.6
Peaxi162Scf00417g01337 Petunia axillaris HOM05D007221 ORTHO05D009204 6.8e-09 64.3 62 59.7
Migut.C00733 Erythranthe guttata HOM05D007221 ORTHO05D009204 1.2e-08 63.5 106 44.3
Hma1.2p1_0203F.1_g086350 Hydrangea macrophylla HOM05D007221 ORTHO05D009204 2.0e-08 62.8 65 55.4
Nitab4.5_0006280g0040 Nicotiana tabacum HOM05D007221 ORTHO05D009204 2.6e-08 62.4 62 56.5
Nitab4.5_0010510g0010 Nicotiana tabacum HOM05D007221 ORTHO05D009204 2.6e-08 62.4 62 56.5
Prupe.1G379100 Prunus persica HOM05D007221 ORTHO05D009204 2.6e-08 62.4 62 56.5
MD08G1031600 Malus domestica HOM05D007221 ORTHO05D009204 7.5e-08 60.8 95 44.2
MD15G1027300 Malus domestica HOM05D007221 ORTHO05D009204 7.5e-08 60.8 95 43.2
PGR031G1076 Punica granatum HOM05D007221 ORTHO05D009204 7.5e-08 60.8 62 56.5
CAN.G1226.17 Capsicum annuum HOM05D007221 ORTHO05D009204 9.8e-08 60.5 62 54.8
Solyc04g080390.4 Solanum lycopersicum HOM05D007221 ORTHO05D009204 1.7e-07 59.7 62 54.8
PGSC0003DMG400003731 Solanum tuberosum HOM05D007221 ORTHO05D009204 1.7e-07 59.7 62 54.8
Sopen04g033980 Solanum pennellii HOM05D007221 ORTHO05D009204 3.7e-07 58.5 62 53.2
Ah.05g167430 Amaranthus hybridus HOM05D007221 ORTHO05D009204 6.3e-07 57.8 67 52.2
Manes.05G159500 Manihot esculenta HOM05D007221 ORTHO05D009204 6.3e-07 57.8 95 43.2
GSVIVG01009712001 Vitis vinifera HOM05D007221 ORTHO05D009204 6.3e-07 57.8 62 53.2
FvH4_2g39780 Fragaria vesca HOM05D007221 ORTHO05D009204 8.3e-07 57.4 62 53.2
FAN15G0707 Fragaria x ananassa HOM05D007221 ORTHO05D009204 8.3e-07 57.4 62 53.2
Atru.chr13.477 Acer truncatum HOM05D007221 ORTHO05D009204 1.1e-06 57.0 62 54.8
Ciclev10002305m.g Citrus clementina HOM05D007221 ORTHO05D009204 1.1e-06 57.0 95 43.2
Cc10_g02840 Coffea canephora HOM05D007221 ORTHO05D009204 1.1e-06 57.0 62 56.5
Lj4A39T64 Lonicera japonica HOM05D007221 ORTHO05D009204 1.1e-06 57.0 95 40.0
RcHm_v2.0_Chr1g0350071 Rosa chinensis HOM05D007221 ORTHO05D009204 1.1e-06 57.0 62 51.6
CiPaw.15G078400 Carya illinoinensis HOM05D007221 ORTHO05D009204 1.4e-06 56.6 95 41.1
Eucgr.F01893 Eucalyptus grandis HOM05D007221 ORTHO05D009204 1.8e-06 56.2 62 53.2
Gorai.002G127900 Gossypium raimondii HOM05D007221 ORTHO05D009204 1.8e-06 56.2 93 44.1
Psat5g017120 Pisum sativum HOM05D007221 ORTHO05D009204 1.8e-06 56.2 62 51.6
Actinidia38006 Actinidia chinensis HOM05D007221 ORTHO05D009204 2.4e-06 55.8 62 51.6
Ca_15515_v3 Cicer arietinum L. HOM05D007221 ORTHO05D009204 2.4e-06 55.8 62 51.6
RcHm_v2.0_Chr6g0301081 Rosa chinensis HOM05D007221 ORTHO05D009204 2.4e-06 55.8 62 51.6
Sabra14G0145300 Salix brachista HOM05D007221 ORTHO05D009204 2.4e-06 55.8 62 54.8
Haze_17964 Corylus avellana HOM05D007221 ORTHO05D009204 3.1e-06 55.5 82 45.1
CsaV3_2G028730 Cucumis sativus L. HOM05D007221 ORTHO05D009204 3.1e-06 55.5 62 53.2
QL02p008631 Quercus lobata HOM05D007221 ORTHO05D009204 3.1e-06 55.5 95 41.1
TPR.G12470 Trifolium pratense HOM05D007221 ORTHO05D009204 3.1e-06 55.5 62 51.6
ClCG08G015050 Citrullus lanatus HOM05D007221 ORTHO05D009204 4.1e-06 55.1 62 51.6
Medtr3g111850 Medicago truncatula HOM05D007221 ORTHO05D009204 4.1e-06 55.1 62 51.6
Potri.014G196800 Populus trichocarpa HOM05D007221 ORTHO05D009204 4.1e-06 55.1 62 54.8
Lj1g0002842 Lotus japonicus HOM05D007221 ORTHO05D009204 5.4e-06 54.7 105 39.0
Glyma.04G031900 Glycine max HOM05D007221 ORTHO05D009204 7.0e-06 54.3 105 40.0
HanXRQChr16g0508501 Helianthus annuus HOM05D007221 ORTHO05D009204 7.0e-06 54.3 61 47.5
Dinv36085 Davidia involucrata HOM05D007221 ORTHO05D009204 9.1e-06 53.9 82 43.9


User provided reference genes

Program Settings