Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19505 Striga asiatica HOM05D005870 ORTHO05D007216 7.1e-73 277.3 156 100.0
MSTRG.3774 Avicennia marina HOM05D005870 ORTHO05D007216 5.8e-51 204.5 169 74.6
Migut.H02353 Erythranthe guttata HOM05D005870 ORTHO05D007216 3.5e-48 195.3 166 72.3
SalBow3G2704 Salvia bowleyana HOM05D005870 ORTHO05D007216 3.0e-47 192.2 169 71.0
Nitab4.5_0006110g0010 Nicotiana tabacum HOM05D005870 ORTHO05D007216 1.3e-45 186.8 169 71.0
unitig_747.g21825 Utricularia gibba HOM05D000660 ORTHO05D000766 1.1e-44 183.7 161 67.7
Nitab4.5_0000430g0130 Nicotiana tabacum HOM05D005870 ORTHO05D007216 1.8e-44 183.0 171 69.0
Hma1.2p1_0308F.1_g120250 Hydrangea macrophylla HOM05D005870 ORTHO05D007216 6.9e-44 181.0 176 65.9
Sopen03g028660 Solanum pennellii HOM05D005870 ORTHO05D007216 3.4e-43 178.7 173 67.6
Cc07_g15090 Coffea canephora HOM05D005870 ORTHO05D007216 4.5e-43 178.3 174 67.2
Dinv13195 Davidia involucrata HOM05D005870 ORTHO05D007216 4.5e-43 178.3 170 66.5
Solyc03g097950.4 Solanum lycopersicum HOM05D005870 ORTHO05D007216 4.5e-43 178.3 173 67.6
PGSC0003DMG400033691 Solanum tuberosum HOM05D005870 ORTHO05D007216 5.8e-43 177.9 172 68.0
Nitab4.5_0004855g0010 Nicotiana tabacum HOM05D005870 ORTHO05D007216 1.3e-42 176.8 172 68.0
Actinidia20008 Actinidia chinensis HOM05D005870 ORTHO05D007216 1.7e-42 176.4 139 75.5
MBI02_g35763_MAGBIO Magnolia biondii HOM05D005870 ORTHO05D007216 1.7e-42 176.4 155 68.4
Nn5g30105 Nelumbo nucifera HOM05D005870 ORTHO05D007216 2.2e-42 176.0 165 66.7
Oeu002170.1 Olea europaea HOM05D005870 ORTHO05D007216 6.5e-42 174.5 172 66.3
Nitab4.5_0000033g0220 Nicotiana tabacum HOM05D005870 ORTHO05D007216 1.4e-41 173.3 172 65.7
vmacro07307 Vaccinium macrocarpon HOM05D005870 ORTHO05D007216 1.4e-41 173.3 143 71.3
Nn1g05359 Nelumbo nucifera HOM05D005870 ORTHO05D007216 3.2e-41 172.2 163 65.0
Peaxi162Scf00171g00927 Petunia axillaris HOM05D005870 ORTHO05D007216 4.2e-41 171.8 167 65.3
TAR381G0757 Trochodendron aralioides HOM05D005870 ORTHO05D007216 7.1e-41 171.0 168 66.1
Atru.chr4.42 Acer truncatum HOM05D005870 ORTHO05D007216 9.3e-41 170.6 170 65.9
AL8G42760 Arabidopsis lyrata HOM05D005870 ORTHO05D007216 1.2e-40 170.2 147 69.4
ECA232G4208 Erigeron canadensis HOM05D005870 ORTHO05D007216 1.2e-40 170.2 153 67.3
Lsat_1_v5_gn_4_141420 Lactuca sativa HOM05D005870 ORTHO05D007216 2.7e-40 169.1 162 64.2
PGR004G1211 Punica granatum HOM05D005870 ORTHO05D007216 2.7e-40 169.1 162 64.8
Ciclev10026623m.g Citrus clementina HOM05D005870 ORTHO05D007216 3.5e-40 168.7 147 70.1
QL06p049269 Quercus lobata HOM05D005870 ORTHO05D007216 3.5e-40 168.7 171 65.5
CiPaw.04G100500 Carya illinoinensis HOM05D005870 ORTHO05D007216 4.6e-40 168.3 167 64.1
MD00G1199600 Malus domestica HOM05D005870 ORTHO05D007216 4.6e-40 168.3 164 65.2
Rhsim10G0163500 Rhododendron simsii HOM05D005870 ORTHO05D007216 6.0e-40 167.9 147 69.4
Solyc06g072470.4 Solanum lycopersicum HOM05D005870 ORTHO05D007216 6.0e-40 167.9 167 65.9
Sopen06g028840 Solanum pennellii HOM05D005870 ORTHO05D007216 6.0e-40 167.9 167 65.9
HanXRQChr15g0484171 Helianthus annuus HOM05D005870 ORTHO05D007216 7.9e-40 167.5 165 64.2
Thecc.01G100700 Theobroma cacao HOM05D005870 ORTHO05D007216 7.9e-40 167.5 171 62.0
Carub.0008s2608 Capsella rubella HOM05D005870 ORTHO05D007216 1.0e-39 167.2 170 62.4
AT5G65220 Arabidopsis thaliana HOM05D005870 ORTHO05D007216 1.8e-39 166.4 170 62.9
PGSC0003DMG400026946 Solanum tuberosum HOM05D005870 ORTHO05D007216 1.8e-39 166.4 171 64.9
COL.COLO4_27254 Corchorus olitorius HOM05D005870 ORTHO05D007216 2.3e-39 166.0 171 63.2
Manes.13G093516 Manihot esculenta HOM05D005870 ORTHO05D007216 3.9e-39 165.2 171 62.6
Sed0015800 Sechium edule HOM05D005870 ORTHO05D007216 5.1e-39 164.9 167 64.7
CDE10G0106 Ceratophyllum demersum HOM05D005870 ORTHO05D007216 6.7e-39 164.5 166 59.0
Gohir.A11G202300 Gossypium hirsutum HOM05D005870 ORTHO05D007216 1.9e-38 162.9 171 61.4
Gohir.D11G220900 Gossypium hirsutum HOM05D005870 ORTHO05D007216 1.9e-38 162.9 171 61.4
Gorai.007G237100 Gossypium raimondii HOM05D005870 ORTHO05D007216 1.9e-38 162.9 171 61.4
CARHR279150 Cardamine hirsuta HOM05D005870 ORTHO05D007216 2.5e-38 162.5 166 61.4
Duzib147G1590 Durio zibethinus HOM05D005870 ORTHO05D007216 4.3e-38 161.8 163 60.7
CDE10G0428 Ceratophyllum demersum HOM05D005870 ORTHO05D007216 5.7e-38 161.4 163 58.9
DCAR_014215 Daucus carota HOM05D005870 ORTHO05D007216 5.7e-38 161.4 167 61.7
Duzib187G0334 Durio zibethinus HOM05D005870 ORTHO05D007216 7.4e-38 161.0 171 62.6
Prupe.6G188000 Prunus persica HOM05D005870 ORTHO05D007216 2.2e-37 159.5 146 67.1
Glyma.05G178000 Glycine max HOM05D005870 ORTHO05D007216 2.8e-37 159.1 155 63.2
CAN.G65.97 Capsicum annuum HOM05D005870 ORTHO05D007216 4.8e-37 158.3 165 62.4
Potri.007G093700 Populus trichocarpa HOM05D005870 ORTHO05D007216 8.2e-37 157.5 164 61.0
Cpa.g.sc615.2 Carica papaya HOM05D005870 ORTHO05D007216 2.4e-36 156.0 169 62.1
MBI05_g37050_MAGBIO Magnolia biondii HOM05D005870 ORTHO05D007216 3.1e-36 155.6 112 79.5
Ca_17742_v3 Cicer arietinum L. HOM05D005870 ORTHO05D007216 9.0e-36 154.1 169 59.8
Glyma.08G135000 Glycine max HOM05D005870 ORTHO05D007216 1.2e-35 153.7 154 61.7
Sp2g28320 Schrenkiella parvula HOM05D005870 ORTHO05D007216 1.2e-35 153.7 149 65.1
Medtr8g090185 Medicago truncatula HOM05D005870 ORTHO05D007216 2.0e-35 152.9 164 59.1
Thhalv10005022m.g Eutrema salsugineum HOM05D005870 ORTHO05D007216 1.3e-34 150.2 168 59.5
CANSAT01G0848 Cannabis sativa HOM05D005870 ORTHO05D007216 1.7e-34 149.8 163 61.3
FAN23G0590 Fragaria x ananassa HOM05D005870 ORTHO05D007216 2.2e-34 149.4 163 58.9
Phvul.002G256700 Phaseolus vulgaris HOM05D005870 ORTHO05D007216 2.2e-34 149.4 168 59.5
BcaB07g34228 Brassica carinata HOM05D005870 ORTHO05D007216 6.5e-34 147.9 163 60.7
Aqoxy6G00780 Aquilegia oxysepala HOM05D005870 ORTHO05D007216 1.1e-33 147.1 163 61.3
Aa31LG1G16740 Aethionema arabicum HOM05D005870 ORTHO05D007216 1.9e-33 146.4 148 62.8
AUR62003803 Chenopodium quinoa HOM05D005870 ORTHO05D007216 3.2e-33 145.6 167 56.9
VMungo0251G1964 Vigna mungo HOM05D005870 ORTHO05D007216 4.2e-33 145.2 163 58.9
RcHm_v2.0_Chr2g0113161 Rosa chinensis HOM05D005870 ORTHO05D007216 9.4e-33 144.1 163 57.7
BcaB02g09886 Brassica carinata HOM05D005870 ORTHO05D007216 1.2e-32 143.7 146 62.3
C03p60860 Brassica napus HOM05D005870 ORTHO05D007216 1.6e-32 143.3 166 58.4
ClCG10G008830 Citrullus lanatus HOM05D005870 ORTHO05D007216 1.6e-32 143.3 167 58.7
THA.LOC104801696 Tarenaya hassleriana HOM05D005870 ORTHO05D007216 1.6e-32 143.3 149 62.4
Eucgr.I00441 Eucalyptus grandis HOM05D005870 ORTHO05D007216 2.1e-32 142.9 146 61.6
BcaC01g02758 Brassica carinata HOM05D005870 ORTHO05D007216 2.7e-32 142.5 166 57.8
BolC3t18343H Brassica oleracea HOM05D005870 ORTHO05D007216 2.7e-32 142.5 166 57.8
FAN26G0235 Fragaria x ananassa HOM05D005870 ORTHO05D007216 2.7e-32 142.5 163 57.1
FAN19G2750 Fragaria x ananassa HOM05D005870 ORTHO05D007216 3.6e-32 142.1 163 57.1
Lj2A546G34 Lonicera japonica HOM05D005870 ORTHO05D007216 3.6e-32 142.1 147 61.2
A06p32070 Brassica napus HOM05D005870 ORTHO05D007216 4.6e-32 141.7 166 57.8
BraA06t26136Z Brassica rapa HOM05D005870 ORTHO05D007216 4.6e-32 141.7 166 57.8
FAN28G1626 Fragaria x ananassa HOM05D005870 ORTHO05D007216 6.1e-32 141.4 163 56.4
FvH4_1g20710 Fragaria vesca HOM05D005870 ORTHO05D007216 7.9e-32 141.0 163 57.1
Lj4g0027302 Lotus japonicus HOM05D005870 ORTHO05D007216 7.9e-32 141.0 163 58.3
Sc03g0002050 Simmondsia chinensis HOM05D005870 ORTHO05D007216 1.8e-31 139.8 166 56.6
MD01G1031300 Malus domestica HOM05D005870 ORTHO05D007216 2.3e-31 139.4 144 63.9
Lalb_Chr12g0203881 Lupinus albus HOM05D005870 ORTHO05D007216 5.1e-31 138.3 163 59.5
Lalb_Chr07g0185191 Lupinus albus HOM05D005870 ORTHO05D007216 1.1e-30 137.1 170 55.3
PSO210G6840 Papaver somniferum HOM05D005870 ORTHO05D007216 1.1e-30 137.1 166 54.2
PSO447G0167 Papaver somniferum HOM05D005870 ORTHO05D007216 1.1e-30 137.1 166 54.2
A02p43790 Brassica napus HOM05D005870 ORTHO05D007216 1.5e-30 136.7 170 55.9
BraA02t09303Z Brassica rapa HOM05D005870 ORTHO05D007216 1.5e-30 136.7 170 55.9
EL10Ac6g15115 Beta vulgaris HOM05D005870 ORTHO05D007216 5.7e-30 134.8 168 54.8
CsaV3_4G008900 Cucumis sativus L. HOM05D005870 ORTHO05D007216 5.7e-30 134.8 149 57.7
SGA_v2.0_scaffold111G31512 Striga asiatica HOM05D005870 ORTHO05D007216 6.3e-29 131.3 109 73.4
TPR.G6297 Trifolium pratense HOM05D005870 ORTHO05D007216 6.3e-29 131.3 167 53.3
TWI74G0695 Tripterygium wilfordii HOM05D005870 ORTHO05D007216 6.3e-29 131.3 172 54.7
Os02g0754300 Oryza sativa ssp. japonica HOM05D005870 ORTHO05D007216 4.1e-28 128.6 137 59.1
AUR62001999 Chenopodium quinoa HOM05D005870 ORTHO05D007216 1.5e-27 126.7 160 52.5
TWI53G1299 Tripterygium wilfordii HOM05D005870 ORTHO05D007216 4.5e-27 125.2 149 59.7
arahy.Tifrunner.gnm1.ann1.K43FII Arachis hypogaea HOM05D005870 ORTHO05D007216 5.9e-27 124.8 123 61.8
arahy.Tifrunner.gnm1.ann1.Q6429D Arachis hypogaea HOM05D005870 ORTHO05D007216 6.5e-26 121.3 148 56.1
Zm00001eb249540 Zea mays HOM05D005870 ORTHO05D007216 1.9e-25 119.8 101 66.3
Hund13620 Selenicereus undatus HOM05D005870 ORTHO05D007216 4.2e-25 118.6 163 53.4
Zm00001eb335180 Zea mays HOM05D005870 ORTHO05D007216 4.2e-25 118.6 101 65.3
Zm00001eb255290 Zea mays HOM05D005870 ORTHO05D007216 7.2e-25 117.9 107 63.6
MELO3C018954.2 Cucumis melo HOM05D005870 ORTHO05D007216 4.7e-24 115.2 149 52.3
Sabra07G0077600 Salix brachista HOM05D005870 ORTHO05D007216 6.1e-24 114.8 277 36.1
Hund16294 Selenicereus undatus HOM05D005870 ORTHO05D007216 2.3e-23 112.8 192 48.4
Zm00001eb194130 Zea mays HOM05D005870 ORTHO05D007216 2.3e-23 112.8 161 46.6
Psat7g055240 Pisum sativum HOM05D005870 ORTHO05D007216 8.8e-23 110.9 150 50.7
MSTRG.15716 Avicennia marina HOM05D005870 ORTHO05D007216 2.2e-21 106.3 111 63.1
GSVIVG01004857001 Vitis vinifera HOM05D005870 ORTHO05D007216 2.0e-19 99.8 79 74.7
GSVIVG01013304001 Vitis vinifera HOM05D005870 ORTHO05D007216 2.0e-19 99.8 79 74.7
Haze_24920 Corylus avellana HOM05D005870 ORTHO05D007216 4.5e-19 98.6 112 58.0
Cfa002651 Carpinus fangiana HOM05D005870 ORTHO05D007216 2.2e-18 96.3 115 56.5
Mapoly0011s0026 Marchantia polymorpha HOM05D005870 ORTHO05D007216 3.8e-18 95.5 152 43.4
SMO347G0042 Selaginella moellendorffii HOM05D005870 ORTHO05D007216 8.5e-18 94.4 111 50.5
Actinidia06560 Actinidia chinensis HOM05D005870 ORTHO05D007216 1.1e-17 94.0 107 61.7
ATR0782G037 Amborella trichopoda HOM05D005870 ORTHO05D007216 1.1e-17 94.0 92 59.8
Pp3c9_19800 Physcomitrium patens HOM05D005870 ORTHO05D007216 7.2e-17 91.3 155 44.5
AagrBONN_evm.TU.Sc2ySwM_117.2528 Anthoceros agrestis HOM05D005870 ORTHO05D007216 1.6e-16 90.1 117 49.6
HPP92_013107 Vanilla planifolia HOM05D005870 ORTHO05D007216 5.2e-15 85.1 106 52.8
HPP92_013094 Vanilla planifolia HOM05D005870 ORTHO05D007216 1.1e-14 84.0 63 69.8
Haze_24918 Corylus avellana HOM05D009730 ORTHO05D000126 1.2e-11 73.9 55 70.9
BolC2t12461H Brassica oleracea HOM05D005870 ORTHO05D007216 5.9e-11 71.6 50 82.0
MBI18_g38162_MAGBIO Magnolia biondii HOM05D005870 ORTHO05D007216 5.9e-11 71.6 72 63.9
CBR_g8034 Chara braunii HOM05D005870 ORTHO05D007216 2.5e-09 66.2 92 41.3
Lj5C62T6 Lonicera japonica HOM05D005870 ORTHO05D007216 7.2e-09 64.7 74 55.4


User provided reference genes

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