Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 6.1e-172 607.4 319 100.0
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 1.5e-64 250.8 410 43.9
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 2.6e-61 240.0 378 48.4
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 6.1e-47 192.2 330 42.7
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 4.0e-46 189.5 335 43.9
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 4.5e-42 176.0 363 39.7
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 1.0e-41 174.9 347 38.6
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.3e-41 174.5 345 40.6
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 2.3e-41 173.7 364 39.8
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 2.5e-40 170.2 339 41.6
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 9.5e-40 168.3 384 37.8
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 1.0e-38 164.9 283 45.6
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 3.4e-37 159.8 320 40.3
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 2.2e-36 157.1 308 39.0
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 6.4e-36 155.6 320 40.3
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 2.4e-35 153.7 386 35.2
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 5.4e-35 152.5 297 40.7
Cc01_g13310 Coffea canephora HOM05D006297 ORTHO05D007873 9.2e-35 151.8 367 36.8
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 9.2e-35 151.8 375 38.1
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 1.2e-34 151.4 371 36.4
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 2.7e-34 150.2 366 37.7
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 2.7e-34 150.2 352 37.5
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 3.5e-34 149.8 345 35.1
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 5.0e-33 146.0 375 36.3
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 8.6e-33 145.2 320 39.1
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 4.3e-32 142.9 336 37.5
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 1.2e-31 141.4 453 31.6
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 2.8e-31 140.2 274 39.8
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 3.6e-31 139.8 348 35.9
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 2.3e-30 137.1 394 33.2
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 3.4e-29 133.3 357 34.7
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 9.8e-29 131.7 442 30.3
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.7e-28 131.0 509 30.5
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 1.7e-28 131.0 362 33.7
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 4.9e-28 129.4 465 30.8
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 1.9e-27 127.5 377 35.5
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 3.2e-27 126.7 316 37.0
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 5.4e-27 125.9 351 36.2
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 2.7e-26 123.6 437 30.9
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 4.6e-26 122.9 324 36.1
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 7.8e-26 122.1 413 32.0
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 1.0e-25 121.7 433 30.3
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 3.9e-25 119.8 336 35.1
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 8.6e-25 118.6 267 41.9
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 1.9e-24 117.5 403 30.3
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 5.6e-24 115.9 340 33.5
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 9.5e-24 115.2 377 32.6
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 1.6e-23 114.4 436 30.0
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 2.1e-23 114.0 376 31.6
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 3.6e-23 113.2 329 34.0
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 4.7e-23 112.8 405 30.4
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 1.4e-22 111.3 337 32.3
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 2.0e-21 107.5 328 33.5
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 2.6e-21 107.1 235 39.1
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 2.6e-21 107.1 441 31.1
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 7.5e-21 105.5 368 32.1
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 1.3e-20 104.8 411 31.1
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 1.3e-20 104.8 243 35.8
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 1.7e-20 104.4 287 36.2
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 4.9e-20 102.8 334 34.7
Dinv42987 Davidia involucrata HOM05D006297 ORTHO05D007873 1.9e-19 100.9 319 33.2
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 1.9e-19 100.9 450 28.0
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 2.4e-19 100.5 445 29.9
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 2.4e-19 100.5 230 40.0
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 3.2e-19 100.1 366 35.2
TPR.G6873 Trifolium pratense HOM05D006297 ORTHO05D007873 3.2e-19 100.1 358 34.1
BcaC01g01889 Brassica carinata HOM05D006297 ORTHO05D007873 4.1e-19 99.8 357 30.8
C03p70940 Brassica napus HOM05D006297 ORTHO05D007873 4.1e-19 99.8 357 30.5
BolC3t19369H Brassica oleracea HOM05D006297 ORTHO05D007873 4.1e-19 99.8 357 30.5
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 5.4e-19 99.4 129 50.4
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 5.4e-19 99.4 129 50.4
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 2.1e-18 97.4 408 29.9
CARHR154920 Cardamine hirsuta HOM05D006297 ORTHO05D007873 2.7e-18 97.1 413 28.3
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 2.7e-18 97.1 298 31.2
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 3.5e-18 96.7 357 32.8
Aa31LG4G15680 Aethionema arabicum HOM05D006297 ORTHO05D007873 1.7e-17 94.4 377 29.4
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 1.7e-17 94.4 364 32.7
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 2.3e-17 94.0 385 29.6
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 3.9e-17 93.2 390 29.5
BcaB05g23510 Brassica carinata HOM05D006297 ORTHO05D007873 8.6e-17 92.0 364 29.7
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 8.6e-17 92.0 235 34.0
Carub.0005s1301 Capsella rubella HOM05D006297 ORTHO05D007873 1.1e-16 91.7 382 28.8
Thhalv10002567m.g Eutrema salsugineum HOM05D006297 ORTHO05D007873 1.9e-16 90.9 370 28.9
AL5G25730 Arabidopsis lyrata HOM05D006297 ORTHO05D007873 2.5e-16 90.5 378 28.6
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 2.5e-16 90.5 210 38.6
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 4.3e-16 89.7 280 31.4
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 9.5e-16 88.6 333 29.1
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 1.2e-15 88.2 357 28.0
AT3G46750 Arabidopsis thaliana HOM05D006297 ORTHO05D007873 1.6e-15 87.8 381 29.4
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 3.6e-15 86.7 245 32.2
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 4.7e-15 86.3 485 28.0
Sp5g14970 Schrenkiella parvula HOM05D006297 ORTHO05D007873 6.2e-15 85.9 372 27.7
BraA01t02522Z Brassica rapa HOM05D006297 ORTHO05D007873 8.1e-15 85.5 365 28.5
A01p26050 Brassica napus HOM05D006297 ORTHO05D007873 1.1e-14 85.1 364 28.3
Lalb_Chr24g0397191 Lupinus albus HOM05D006297 ORTHO05D007873 1.1e-14 85.1 171 39.8
BcaB02g10710 Brassica carinata HOM05D006297 ORTHO05D007873 1.8e-14 84.3 301 28.6
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 3.1e-14 83.6 464 27.6
BcaC09g49771 Brassica carinata HOM05D006297 ORTHO05D007873 4.0e-14 83.2 364 28.3
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 5.2e-14 82.8 121 49.6
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 5.2e-14 82.8 314 31.8
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 8.9e-14 82.0 524 25.8
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 1.5e-13 81.3 464 27.6
VMungo1080G0409 Vigna mungo HOM05D006297 ORTHO05D007873 5.8e-13 79.3 307 30.3
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 1.3e-12 78.2 444 26.6
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 2.9e-12 77.0 236 34.3
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 3.7e-12 76.6 379 26.9
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.9e-11 74.3 114 45.6
BolC1t03251H Brassica oleracea HOM05D000026 ORTHO05D007873 4.1e-11 73.2 354 29.7
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 5.4e-11 72.8 496 27.2
Dinv17043 Davidia involucrata HOM05D006297 ORTHO05D007873 9.2e-11 72.0 130 43.1
Dinv43111 Davidia involucrata HOM05D006297 ORTHO05D007873 9.2e-11 72.0 130 43.1
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 5.1e-09 66.2 236 30.1
C01p33140 Brassica napus HOM05D006297 ORTHO05D007873 6.6e-09 65.9 236 29.7
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 6.6e-09 65.9 148 31.8
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.1e-08 65.1 115 36.5
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.1e-08 65.1 140 33.6
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 4.3e-08 63.2 148 31.8
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 1.2e-07 61.6 100 40.0
HanXRQChr11g0340671 Helianthus annuus HOM05D006297 ORTHO05D007873 2.8e-07 60.5 202 31.7
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 3.6e-07 60.1 321 28.3


User provided reference genes

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