Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold53G19400 Striga asiatica HOM05D057014 ORTHO05D400088 1.5e-149 532.7 258 100.0
SGA_v2.0_scaffold9G04702 Striga asiatica HOM05D057014 ORTHO05D405526 6.1e-21 105.5 112 57.1
MSTRG.693 Avicennia marina HOM05D000650 ORTHO05D000735 4.5e-08 62.8 33 90.9
Cc11_g13160 Coffea canephora HOM05D000650 ORTHO05D000735 7.7e-08 62.0 33 87.9
Lj3C1039T1 Lonicera japonica HOM05D000650 ORTHO05D000735 1.3e-07 61.2 33 84.8
SGA_v2.0_scaffold302G47827 Striga asiatica HOM05D000189 ORTHO05D000474 1.7e-07 60.8 33 90.9
Rhsim12G0157200 Rhododendron simsii HOM05D000650 ORTHO05D000735 2.2e-07 60.5 33 78.8
Nitab4.5_0004485g0030 Nicotiana tabacum HOM05D000650 ORTHO05D000735 3.8e-07 59.7 34 79.4
Oeu054892.1 Olea europaea HOM05D000650 ORTHO05D000735 5.0e-07 59.3 33 84.8
CAN.G1207.3 Capsicum annuum HOM05D000650 ORTHO05D000735 6.5e-07 58.9 34 76.5
Solyc05g007300.3 Solanum lycopersicum HOM05D000650 ORTHO05D000735 6.5e-07 58.9 34 76.5
Sopen05g003250 Solanum pennellii HOM05D000650 ORTHO05D000735 6.5e-07 58.9 34 76.5
PGSC0003DMG402023061 Solanum tuberosum HOM05D000650 ORTHO05D000735 6.5e-07 58.9 34 76.5
TWI81G0650 Tripterygium wilfordii HOM05D000650 ORTHO05D000735 6.5e-07 58.9 33 81.8
Nitab4.5_0000703g0050 Nicotiana tabacum HOM05D000650 ORTHO05D000735 1.1e-06 58.2 34 73.5
Rhsim08G0157100 Rhododendron simsii HOM05D000650 ORTHO05D000735 1.1e-06 58.2 33 78.8
SGA_v2.0_scaffold25G10912 Striga asiatica HOM05D000046 ORTHO05D000195 1.1e-06 58.2 31 80.6
Haze_12027 Corylus avellana HOM05D000650 ORTHO05D000735 1.5e-06 57.8 35 77.1
DCAR_021527 Daucus carota HOM05D000650 ORTHO05D000735 1.5e-06 57.8 33 78.8
Peaxi162Scf00541g00623 Petunia axillaris HOM05D000650 ORTHO05D000735 1.5e-06 57.8 33 78.8
vmacro17556 Vaccinium macrocarpon HOM05D000650 ORTHO05D000735 1.5e-06 57.8 31 83.9
FvH4_5g15180 Fragaria vesca HOM05D000650 ORTHO05D000735 1.9e-06 57.4 33 81.8
MSTRG.23020 Avicennia marina HOM05D000650 ORTHO05D000735 2.5e-06 57.0 33 75.8
CANSAT80G1082 Cannabis sativa HOM05D000650 ORTHO05D000735 2.5e-06 57.0 33 75.8
TAR629G1090 Trochodendron aralioides HOM05D000650 ORTHO05D000735 2.5e-06 57.0 33 72.7
GSVIVG01020012001 Vitis vinifera HOM05D000650 ORTHO05D000735 2.5e-06 57.0 33 78.8
Actinidia37638 Actinidia chinensis HOM05D000650 ORTHO05D000735 3.2e-06 56.6 40 62.5
MSTRG.9634 Avicennia marina HOM05D000650 ORTHO05D000735 3.2e-06 56.6 35 77.1
CSS0008091 Camellia sinensis var. sinensis HOM05D000650 ORTHO05D000735 3.2e-06 56.6 33 72.7
MBI05_g35459_MAGBIO Magnolia biondii HOM05D000650 ORTHO05D000735 3.2e-06 56.6 33 75.8
Migut.I00165 Erythranthe guttata HOM05D000650 ORTHO05D000735 4.2e-06 56.2 31 77.4
Migut.L01308 Erythranthe guttata HOM05D000650 ORTHO05D000735 4.2e-06 56.2 33 75.8
Gohir.D03G092200 Gossypium hirsutum HOM05D000650 ORTHO05D000735 4.2e-06 56.2 33 75.8
Gorai.003G095800 Gossypium raimondii HOM05D000650 ORTHO05D000735 4.2e-06 56.2 33 75.8
Dinv38691 Davidia involucrata HOM05D000650 ORTHO05D000735 5.5e-06 55.8 33 78.8
MBI02_g23679_MAGBIO Magnolia biondii HOM05D000650 ORTHO05D000735 5.5e-06 55.8 33 75.8
Aa31LG4G4780 Aethionema arabicum HOM05D000650 ORTHO05D000735 9.4e-06 55.1 33 78.8
ECA246G1204 Erigeron canadensis HOM05D000650 ORTHO05D000735 9.4e-06 55.1 33 78.8
TAR371G0018 Trochodendron aralioides HOM05D001645 ORTHO05D000735 9.4e-06 55.1 32 71.9
GSVIVG01008026001 Vitis vinifera HOM05D000650 ORTHO05D000735 9.4e-06 55.1 33 72.7


User provided reference genes

Program Settings