Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold53G19357 Striga asiatica HOM05D011787 ORTHO05D008317 7.1e-207 723.8 387 100.0
SGA_v2.0_scaffold53G19356 Striga asiatica HOM05D011787 ORTHO05D008317 1.9e-90 337.0 333 61.3
SGA_v2.0_scaffold335G49122 Striga asiatica HOM05D011787 ORTHO05D008317 7.7e-36 155.6 127 66.1
SGA_v2.0_scaffold335G49121 Striga asiatica HOM05D011787 ORTHO05D008317 1.9e-34 151.0 129 63.6
SGA_v2.0_scaffold241G44194 Striga asiatica HOM05D011787 ORTHO05D008317 1.0e-32 145.2 204 51.5
SGA_v2.0_scaffold112G31674 Striga asiatica HOM05D011787 ORTHO05D008317 2.0e-23 114.4 188 40.4
SGA_v2.0_scaffold9G04715 Striga asiatica HOM05D008036 ORTHO05D000174 9.8e-15 85.5 185 36.2
SGA_v2.0_scaffold28G11887 Striga asiatica HOM05D002441 ORTHO05D000174 5.9e-12 76.3 185 31.4
SGA_v2.0_scaffold30G12418 Striga asiatica HOM05D011787 ORTHO05D008317 1.5e-10 71.6 123 35.0
SGA_v2.0_scaffold53G19354 Striga asiatica HOM05D011787 ORTHO05D008317 1.9e-10 71.2 137 43.1
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 1.9e-10 71.2 123 34.1
SGA_v2.0_scaffold19G08771 Striga asiatica HOM05D011787 ORTHO05D008317 3.3e-10 70.5 56 62.5
TPR.G31936 Trifolium pratense HOM05D002090 ORTHO05D001923 4.7e-09 66.6 183 28.4
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 1.8e-08 64.7 183 28.4
SGA_v2.0_scaffold11G05957 Striga asiatica HOM05D011787 ORTHO05D008317 3.1e-08 63.9 128 42.2
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.5e-07 61.6 193 24.4
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 3.4e-07 60.5 152 30.3
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.5e-07 59.3 149 28.2
Nitab4.5_0008694g0040 Nicotiana tabacum HOM05D000193 ORTHO05D008317 1.3e-06 58.5 128 28.1
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 1.3e-06 58.5 173 26.0
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 2.9e-06 57.4 180 25.0
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.9e-06 57.4 211 24.2
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 3.7e-06 57.0 187 25.7
SGA_v2.0_scaffold19G08772 Striga asiatica HOM05D011787 ORTHO05D402179 4.9e-06 56.6 43 72.1
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 6.4e-06 56.2 225 23.1
arahy.Tifrunner.gnm1.ann1.0SIM4H Arachis hypogaea HOM05D002441 ORTHO05D002376 8.3e-06 55.8 185 26.5
Medtr1g082860 Medicago truncatula HOM05D008036 ORTHO05D000174 8.3e-06 55.8 156 26.3


User provided reference genes

Program Settings