Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold53G19356 Striga asiatica HOM05D011787 ORTHO05D008317 2.4e-293 1011.5 547 100.0
SGA_v2.0_scaffold241G44194 Striga asiatica HOM05D011787 ORTHO05D008317 2.2e-92 344.0 409 51.8
SGA_v2.0_scaffold53G19357 Striga asiatica HOM05D011787 ORTHO05D008317 5.3e-91 339.3 333 61.3
SGA_v2.0_scaffold335G49122 Striga asiatica HOM05D011787 ORTHO05D008317 5.4e-51 206.5 542 31.4
SGA_v2.0_scaffold335G49121 Striga asiatica HOM05D011787 ORTHO05D008317 3.5e-50 203.8 542 31.0
SGA_v2.0_scaffold112G31674 Striga asiatica HOM05D011787 ORTHO05D008317 3.4e-29 134.0 219 42.5
SGA_v2.0_scaffold53G19354 Striga asiatica HOM05D011787 ORTHO05D008317 9.9e-29 132.5 184 45.7
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 1.1e-27 129.0 193 34.7
SGA_v2.0_scaffold30G12418 Striga asiatica HOM05D011787 ORTHO05D008317 6.6e-25 119.8 165 38.8
SGA_v2.0_scaffold28G11887 Striga asiatica HOM05D002441 ORTHO05D000174 8.6e-25 119.4 305 30.5
SGA_v2.0_scaffold9G04715 Striga asiatica HOM05D008036 ORTHO05D000174 1.5e-21 108.6 196 37.8
arahy.Tifrunner.gnm1.ann1.0SIM4H Arachis hypogaea HOM05D002441 ORTHO05D002376 8.7e-17 92.8 407 24.1
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-16 91.3 408 24.3
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 5.6e-16 90.1 361 26.3
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
arahy.Tifrunner.gnm1.ann1.5RWV2W Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-15 89.0 408 24.3
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 1.6e-15 88.6 242 26.4
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 4.8e-15 87.0 361 24.7
TPR.G31936 Trifolium pratense HOM05D002090 ORTHO05D001923 4.8e-15 87.0 195 31.8
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 1.8e-14 85.1 195 31.8
arahy.Tifrunner.gnm1.ann1.481FMC Arachis hypogaea HOM05D002441 ORTHO05D002376 5.3e-14 83.6 326 25.2
Lj4g0003601 Lotus japonicus HOM05D000353 ORTHO05D000174 5.3e-14 83.6 192 27.6
Medtr1g023370 Medicago truncatula HOM05D008036 ORTHO05D000174 2.0e-13 81.6 207 27.1
Medtr4g058660 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-13 81.3 182 28.0
Medtr7g451880 Medicago truncatula HOM05D008036 ORTHO05D000174 2.6e-13 81.3 182 28.0
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.4e-13 80.9 408 23.3
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 9.9e-13 79.3 405 23.7
arahy.Tifrunner.gnm1.ann1.YP63XJ Arachis hypogaea HOM05D002441 ORTHO05D002376 9.9e-13 79.3 406 23.4
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-12 79.0 408 23.0
Medtr2g005490 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr2g007410 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr2g010570 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr3g031190 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr5g030110 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr5g056290 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr5g081190 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr5g091480 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr6g087820 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr7g024060 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
Medtr8g446640 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-12 79.0 189 29.1
TPR.G15973 Trifolium pratense HOM05D001685 ORTHO05D007488 1.3e-12 79.0 200 29.5
Medtr7g074180 Medicago truncatula HOM05D008036 ORTHO05D000174 1.7e-12 78.6 198 28.3
arahy.Tifrunner.gnm1.ann1.K0L2P8 Arachis hypogaea HOM05D010809 ORTHO05D009978 2.2e-12 78.2 193 25.9
arahy.Tifrunner.gnm1.ann1.521VL4 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.9e-12 77.8 237 27.8
Medtr3g015660 Medicago truncatula HOM05D008036 ORTHO05D000174 3.8e-12 77.4 187 27.8
Medtr5g045850 Medicago truncatula HOM05D008036 ORTHO05D000174 3.8e-12 77.4 198 29.3
arahy.Tifrunner.gnm1.ann1.T80IJN Arachis hypogaea HOM05D010809 ORTHO05D009978 4.9e-12 77.0 193 25.9
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 4.9e-12 77.0 188 29.8
arahy.Tifrunner.gnm1.ann1.N18BUU Arachis hypogaea HOM05D002441 ORTHO05D008317 8.4e-12 76.3 250 24.4
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 1.1e-11 75.9 235 25.1
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 1.4e-11 75.5 304 26.6
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 1.9e-11 75.1 198 25.8
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 2.4e-11 74.7 235 25.5
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 3.2e-11 74.3 339 24.2
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 3.2e-11 74.3 235 25.5
SGA_v2.0_scaffold19G08771 Striga asiatica HOM05D011787 ORTHO05D008317 4.2e-11 73.9 56 66.1
arahy.Tifrunner.gnm1.ann1.M21JEJ Arachis hypogaea HOM05D002441 ORTHO05D002376 5.4e-11 73.6 407 23.1
Nitab4.5_0000980g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.4e-11 73.6 270 24.4
SGA_v2.0_scaffold250G44995 Striga asiatica HOM05D010852 ORTHO05D002376 7.1e-11 73.2 261 20.7
TPR.G13259 Trifolium pratense HOM05D002090 ORTHO05D001923 9.3e-11 72.8 193 26.9
SGA_v2.0_scaffold426G51504 Striga asiatica HOM05D011787 ORTHO05D008317 1.6e-10 72.0 63 61.9
Medtr2g010270 Medicago truncatula HOM05D008036 ORTHO05D000174 2.7e-10 71.2 184 26.1
Nitab4.5_0001403g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.6e-10 70.5 187 24.6
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.0e-10 70.1 194 26.8
Lalb_Chr15g0085801 Lupinus albus HOM05D002090 ORTHO05D001923 1.0e-09 69.3 211 24.2
Medtr1g082860 Medicago truncatula HOM05D008036 ORTHO05D000174 1.3e-09 68.9 176 26.1
SGA_v2.0_scaffold11G05957 Striga asiatica HOM05D011787 ORTHO05D008317 1.8e-09 68.6 52 67.3
Lalb_Chr24g0399451 Lupinus albus HOM05D002090 ORTHO05D001923 2.3e-09 68.2 211 23.7
Medtr0105s0080 Medicago truncatula HOM05D008036 ORTHO05D000174 2.3e-09 68.2 202 25.7
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 2.3e-09 68.2 239 22.2
Medtr5g012180 Medicago truncatula HOM05D008036 ORTHO05D000174 3.0e-09 67.8 178 31.5
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 5.1e-09 67.0 234 24.4
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.1e-09 67.0 208 24.5
BraA01t02870Z Brassica rapa HOM05D000353 ORTHO05D000174 6.7e-09 66.6 268 24.3
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 6.7e-09 66.6 246 25.2
Medtr1g011490 Medicago truncatula HOM05D008036 ORTHO05D000174 1.1e-08 65.9 176 25.6
Nitab4.5_0000020g0400 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.1e-08 65.9 225 26.7
A01p27320 Brassica napus HOM05D000353 ORTHO05D000174 1.5e-08 65.5 262 24.0
SGA_v2.0_scaffold285G47047 Striga asiatica HOM05D011787 ORTHO05D008317 1.5e-08 65.5 157 34.4
arahy.Tifrunner.gnm1.ann1.XQZ42W Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-08 64.7 257 24.5
arahy.Tifrunner.gnm1.ann1.RLQ2A3 Arachis hypogaea HOM05D002441 ORTHO05D008317 3.3e-08 64.3 249 25.3
ECA232G2086 Erigeron canadensis HOM05D000232 ORTHO05D000145 3.3e-08 64.3 191 26.2
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 5.6e-08 63.5 203 26.6
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 1.3e-07 62.4 196 26.0
arahy.Tifrunner.gnm1.ann1.BHW5G9 Arachis hypogaea HOM05D002441 ORTHO05D002376 2.1e-07 61.6 257 24.1
arahy.Tifrunner.gnm1.ann1.18WZIV Arachis hypogaea HOM05D002441 ORTHO05D002376 2.8e-07 61.2 255 22.4
TPR.G26593 Trifolium pratense HOM05D002090 ORTHO05D001923 3.7e-07 60.8 92 32.6
Thhalv10027364m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 6.2e-07 60.1 192 24.5
Nitab4.5_0000939g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.2e-07 60.1 143 27.3
SGA_v2.0_scaffold15G07417 Striga asiatica HOM05D002441 ORTHO05D000174 6.2e-07 60.1 128 31.2
arahy.Tifrunner.gnm1.ann1.2DB70H Arachis hypogaea HOM05D002441 ORTHO05D008317 8.1e-07 59.7 167 26.9
Medtr3g036220 Medicago truncatula HOM05D008036 ORTHO05D000174 8.1e-07 59.7 172 27.9
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 8.1e-07 59.7 241 22.8
SGA_v2.0_scaffold237G43840 Striga asiatica HOM05D010852 ORTHO05D002376 1.1e-06 59.3 182 28.0
HanXRQChr05g0150161 Helianthus annuus HOM05D003964 ORTHO05D011997 1.4e-06 58.9 248 23.8
HanXRQChr07g0205571 Helianthus annuus HOM05D003964 ORTHO05D000174 1.4e-06 58.9 255 23.1
Psat0s3648g0040 Pisum sativum HOM05D002090 ORTHO05D001923 1.4e-06 58.9 188 27.1
HanXRQChr12g0359401 Helianthus annuus HOM05D003964 ORTHO05D011997 1.8e-06 58.5 248 23.4
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 1.8e-06 58.5 198 25.3
Nitab4.5_0008694g0040 Nicotiana tabacum HOM05D000193 ORTHO05D008317 2.4e-06 58.2 207 23.7
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.4e-06 58.2 230 20.9
Lsat_1_v5_gn_8_29300 Lactuca sativa HOM05D007823 ORTHO05D000174 3.1e-06 57.8 238 22.7
Medtr2g435900 Medicago truncatula HOM05D008036 ORTHO05D000174 3.1e-06 57.8 103 34.0
Thecc.04G012000 Theobroma cacao HOM05D000096 ORTHO05D000045 3.1e-06 57.8 198 22.7
Lsat_1_v5_gn_3_125861 Lactuca sativa HOM05D007823 ORTHO05D000174 4.0e-06 57.4 238 21.8
TWI53G0107 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.0e-06 57.4 177 27.1
arahy.Tifrunner.gnm1.ann1.36ZJIB Arachis hypogaea HOM05D002441 ORTHO05D002376 5.3e-06 57.0 411 22.4
Lsat_1_v5_gn_6_72321 Lactuca sativa HOM05D007823 ORTHO05D000174 5.3e-06 57.0 238 22.7
Medtr8g027910 Medicago truncatula HOM05D002090 ORTHO05D001923 5.3e-06 57.0 194 23.7
Medtr3g449160 Medicago truncatula HOM05D008036 ORTHO05D000174 6.9e-06 56.6 103 33.0
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.9e-06 56.6 161 25.5
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 9.0e-06 56.2 238 20.6
Lalb_Chr25g0281591 Lupinus albus HOM05D002090 ORTHO05D001923 9.0e-06 56.2 178 27.0


User provided reference genes

Program Settings