Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 1.3e-293 1012.3 517 100.0
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 6.2e-182 641.3 465 71.6
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 1.7e-179 633.3 457 71.8
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 2.3e-168 596.3 474 66.2
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 1.8e-165 586.6 456 66.2
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.6e-153 547.0 455 62.4
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 5.6e-151 538.5 457 61.7
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 6.9e-149 531.6 455 60.7
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 3.4e-148 529.3 447 62.6
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 5.8e-148 528.5 491 58.0
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 6.5e-147 525.0 447 62.2
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 5.9e-140 501.9 504 54.4
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.3e-139 500.7 452 56.6
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 1.2e-137 494.2 461 55.5
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 1.6e-137 493.8 445 58.9
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 2.3e-136 490.0 470 54.3
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 1.0e-128 464.5 485 51.1
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 3.9e-128 462.6 477 52.6
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 4.4e-127 459.1 448 53.8
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.3e-126 457.6 442 55.7
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 3.4e-124 449.5 451 53.7
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 3.9e-120 436.0 508 48.0
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 8.8e-120 434.9 486 49.6
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 1.5e-119 434.1 452 49.1
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 2.0e-119 433.7 447 52.8
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.6e-119 433.3 464 50.4
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.3e-119 433.0 448 52.0
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 5.7e-119 432.2 506 48.2
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 2.4e-117 426.8 445 51.9
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 3.1e-117 426.4 470 49.6
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 5.3e-117 425.6 446 51.3
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 7.0e-117 425.2 501 49.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 2.6e-116 423.3 448 49.1
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 4.5e-116 422.5 489 48.3
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 5.9e-116 422.2 453 50.3
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.7e-115 420.6 470 49.1
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 2.2e-115 420.2 453 51.0
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 2.2e-115 420.2 453 51.0
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 8.5e-115 418.3 510 47.1
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 2.5e-114 416.8 457 50.3
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 3.2e-114 416.4 450 48.4
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 9.4e-114 414.8 457 50.1
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 2.1e-113 413.7 449 50.3
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 2.1e-113 413.7 491 47.0
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 3.6e-113 412.9 457 49.9
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 4.7e-113 412.5 450 50.7
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 2.3e-112 410.2 458 50.0
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 8.8e-112 408.3 491 47.3
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 1.2e-111 407.9 467 48.2
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 3.3e-111 406.4 460 48.7
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 5.7e-111 405.6 456 49.6
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 7.5e-111 405.2 467 47.8
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 7.5e-111 405.2 477 48.4
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.2e-110 403.7 447 48.8
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.2e-110 403.7 447 49.0
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 2.2e-110 403.7 469 48.2
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 3.7e-110 402.9 461 48.6
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 6.3e-110 402.1 496 47.0
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 8.2e-110 401.7 447 49.0
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.2e-108 397.9 470 47.2
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 6.5e-107 392.1 440 47.3
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 1.0e-104 384.8 460 47.4
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 2.6e-103 380.2 455 46.8
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 4.4e-103 379.4 452 47.6
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 2.8e-102 376.7 451 46.6
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 6.5e-99 365.5 369 53.1
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.6e-97 360.9 450 45.3
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 3.1e-93 346.7 456 45.0
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 2.3e-91 340.5 444 44.4
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 2.3e-88 330.5 410 45.9
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 2.6e-87 327.0 378 49.2
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 3.0e-83 313.5 457 40.9
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 1.6e-81 307.8 521 38.0
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 1.7e-78 297.7 320 50.0
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 5.6e-74 282.7 370 44.1
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 3.6e-73 280.0 454 37.2
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 3.1e-72 276.9 466 37.6
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 1.7e-70 271.2 456 37.5
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 4.1e-69 266.5 261 53.3
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 6.6e-67 259.2 318 47.8
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.4e-64 251.5 455 35.4
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 1.0e-59 235.3 285 45.3
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 4.6e-52 209.9 326 40.5
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 9.0e-48 195.7 537 31.5
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 1.1e-34 152.1 190 46.3
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 6.9e-24 116.3 122 50.0
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 9.7e-18 95.9 127 44.1
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 2.8e-17 94.4 94 48.9
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 4.5e-15 87.0 62 64.5
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 2.3e-11 74.7 64 53.1
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 5.0e-06 57.0 175 28.0


User provided reference genes

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