Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 3.6e-129 464.9 233 100.0
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 1.5e-127 459.5 233 98.7
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 2.0e-127 459.1 233 98.3
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 2.3e-104 382.5 232 85.8
SGA_v2.0_scaffold46G17409 Striga asiatica HOM05D021043 ORTHO05D399715 2.2e-70 269.6 170 82.9
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-42 177.2 224 44.2
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 4.5e-31 139.0 185 42.2
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 8.8e-27 124.8 182 37.4
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.4e-24 116.7 217 31.8
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-24 116.3 82 63.4
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 6.9e-24 115.2 132 44.7
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 5.0e-22 109.0 256 31.2
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-21 106.3 211 33.2
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-20 102.4 108 45.4
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 6.1e-20 102.1 247 29.1
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 8.8e-19 98.2 210 31.4
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 4.8e-17 92.4 199 33.2
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 2.4e-16 90.1 148 30.4
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 9.1e-16 88.2 282 25.9
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 4.5e-15 85.9 156 30.1
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.9e-15 85.5 135 34.1
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 7.7e-15 85.1 190 29.5
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-14 83.2 178 25.8
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.8e-14 82.8 178 30.3
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-12 77.8 217 26.3
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-12 77.8 205 26.3
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-12 77.4 102 41.2
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-12 75.9 228 23.7
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 8.0e-12 75.1 232 25.4
SGA_v2.0_scaffold1G00564 Striga asiatica HOM05D006612 ORTHO05D009014 8.0e-12 75.1 138 36.2
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.0e-11 74.7 94 42.6
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-11 74.3 228 23.2
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-11 73.9 236 23.7
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-11 73.9 236 23.7
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-11 72.8 209 25.8
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 8.8e-11 71.6 219 24.2
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 2.8e-09 66.6 56 44.6
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 8.2e-09 65.1 85 36.5
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-08 64.3 89 34.8
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-08 64.3 86 32.6
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-08 63.2 237 21.9
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 4.1e-08 62.8 234 23.5
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 9.1e-08 61.6 219 22.4
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-07 61.2 123 27.6
Cc01_g08090 Coffea canephora HOM05D017605 ORTHO05D025121 2.2e-06 57.0 192 30.2
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-06 56.2 60 43.3


User provided reference genes

Program Settings