Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold53G19289 Striga asiatica HOM05D004265 ORTHO05D005175 1.5e-123 446.4 259 100.0
Migut.B00969 Erythranthe guttata HOM05D004265 ORTHO05D005175 2.1e-85 319.7 289 61.2
SalBow7G1726 Salvia bowleyana HOM05D004265 ORTHO05D005175 3.4e-80 302.4 310 56.1
Cc02_g35030 Coffea canephora HOM05D004265 ORTHO05D005175 2.7e-77 292.7 253 72.3
Actinidia01508 Actinidia chinensis HOM05D004265 ORTHO05D005175 4.8e-74 282.0 212 67.0
Lsat_1_v5_gn_5_104100 Lactuca sativa HOM05D004265 ORTHO05D005175 2.4e-73 279.6 206 66.0
CSS0008259 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 9.0e-73 277.7 220 72.7
HanXRQChr10g0294471 Helianthus annuus HOM05D004265 ORTHO05D005175 1.3e-71 273.9 208 64.4
arahy.Tifrunner.gnm1.ann1.S7F1TF Arachis hypogaea HOM05D004265 ORTHO05D005175 1.7e-71 273.5 248 58.5
Dinv24444 Davidia involucrata HOM05D004265 ORTHO05D005175 1.7e-71 273.5 212 69.8
TWI56G1455 Tripterygium wilfordii HOM05D004265 ORTHO05D005175 2.9e-71 272.7 225 61.8
ECA234G3802 Erigeron canadensis HOM05D004265 ORTHO05D005175 6.4e-71 271.6 280 53.2
arahy.Tifrunner.gnm1.ann1.7983KJ Arachis hypogaea HOM05D004265 ORTHO05D005175 8.4e-71 271.2 248 59.3
QL03p039848 Quercus lobata HOM05D004265 ORTHO05D005175 1.1e-70 270.8 221 69.2
Thecc.05G323000 Theobroma cacao HOM05D004265 ORTHO05D005175 1.1e-70 270.8 246 58.5
Atru.chr2.195 Acer truncatum HOM05D004265 ORTHO05D005175 1.4e-70 270.4 253 56.9
CANSAT54G0622 Cannabis sativa HOM05D004265 ORTHO05D005175 1.4e-70 270.4 250 57.6
Nn3g16212 Nelumbo nucifera HOM05D004265 ORTHO05D005175 2.5e-70 269.6 210 75.2
CiPaw.08G155500 Carya illinoinensis HOM05D004265 ORTHO05D005175 6.0e-69 265.0 246 60.2
PGR031G2746 Punica granatum HOM05D004265 ORTHO05D005175 7.9e-69 264.6 220 75.5
PSO210G0294 Papaver somniferum HOM05D004265 ORTHO05D005175 1.0e-68 264.2 233 58.8
Dinv30893 Davidia involucrata HOM05D004265 ORTHO05D005175 2.3e-68 263.1 204 63.7
Eucgr.H03290 Eucalyptus grandis HOM05D004265 ORTHO05D005175 2.3e-68 263.1 234 58.1
Ciclev10002200m.g Citrus clementina HOM05D004265 ORTHO05D005175 8.7e-68 261.2 252 62.7
MD12G1206000 Malus domestica HOM05D004265 ORTHO05D005175 1.5e-67 260.4 240 56.7
Potri.005G017400 Populus trichocarpa HOM05D004265 ORTHO05D005175 4.3e-67 258.8 242 57.0
unitig_37.g12619 Utricularia gibba HOM05D004265 ORTHO05D005175 4.3e-67 258.8 253 55.3
Cpa.g.sc48.160 Carica papaya HOM05D004265 ORTHO05D005175 5.6e-67 258.5 223 61.0
Glyma.20G097600 Glycine max HOM05D004265 ORTHO05D005175 7.4e-67 258.1 248 56.5
MBI18_g17317_MAGBIO Magnolia biondii HOM05D004265 ORTHO05D005175 9.6e-67 257.7 201 71.1
PSO761G0637 Papaver somniferum HOM05D004265 ORTHO05D005175 9.6e-67 257.7 244 57.4
QL03p013649 Quercus lobata HOM05D004265 ORTHO05D005175 9.6e-67 257.7 240 63.3
Carub.0002s0772 Capsella rubella HOM05D004265 ORTHO05D005175 1.6e-66 256.9 209 60.8
Medtr7g112110 Medicago truncatula HOM05D004265 ORTHO05D005175 2.8e-66 256.1 201 64.7
Aqoxy2G02767 Aquilegia oxysepala HOM05D004265 ORTHO05D005175 3.7e-66 255.8 212 71.2
Hund21868 Selenicereus undatus HOM05D004265 ORTHO05D005175 3.7e-66 255.8 201 69.7
AT1G56423 Arabidopsis thaliana HOM05D004265 ORTHO05D005175 4.8e-66 255.4 210 67.1
Duzib106G0903 Durio zibethinus HOM05D004265 ORTHO05D005175 6.2e-66 255.0 246 63.0
Rhsim05G0126500 Rhododendron simsii HOM05D004265 ORTHO05D005175 6.2e-66 255.0 227 59.0
AL1G66120 Arabidopsis lyrata HOM05D004265 ORTHO05D005175 8.2e-66 254.6 199 68.3
Lalb_Chr02g0147811 Lupinus albus HOM05D004265 ORTHO05D005175 5.3e-65 251.9 251 57.4
Medtr1g084040 Medicago truncatula HOM05D004265 ORTHO05D005175 5.3e-65 251.9 252 54.4
Os03g0307000 Oryza sativa ssp. japonica HOM05D004265 ORTHO05D005175 5.3e-65 251.9 244 62.7
TPR.G2612 Trifolium pratense HOM05D004265 ORTHO05D005175 9.0e-65 251.1 242 58.7
VMungo0720G2336 Vigna mungo HOM05D004265 ORTHO05D005175 1.5e-64 250.4 248 56.9
CARHR055200 Cardamine hirsuta HOM05D004265 ORTHO05D005175 2.0e-64 250.0 199 61.3
Lj1g0016387 Lotus japonicus HOM05D004265 ORTHO05D005175 2.0e-64 250.0 198 63.1
Phvul.007G201300 Phaseolus vulgaris HOM05D004265 ORTHO05D005175 4.5e-64 248.8 241 55.6
Hma1.2p1_0052F.1_g030750 Hydrangea macrophylla HOM05D004265 ORTHO05D005175 5.8e-64 248.4 227 57.3
Lj5g0009766 Lotus japonicus HOM05D004265 ORTHO05D005175 5.8e-64 248.4 243 56.8
AUR62006753 Chenopodium quinoa HOM05D004265 ORTHO05D005175 2.9e-63 246.1 201 66.2
Prupe.6G313200 Prunus persica HOM05D004265 ORTHO05D005175 2.9e-63 246.1 228 66.7
Sc16g0009030 Simmondsia chinensis HOM05D004265 ORTHO05D005175 2.9e-63 246.1 214 60.7
Peaxi162Scf00673g00321 Petunia axillaris HOM05D004265 ORTHO05D005175 3.8e-63 245.7 266 62.0
AUR62000397 Chenopodium quinoa HOM05D004265 ORTHO05D005175 4.9e-63 245.4 212 65.6
RcHm_v2.0_Chr3g0457041 Rosa chinensis HOM05D004265 ORTHO05D005175 4.9e-63 245.4 218 57.8
Sed0011283 Sechium edule HOM05D004265 ORTHO05D005175 8.4e-63 244.6 215 64.2
Glyma.10G147100 Glycine max HOM05D004265 ORTHO05D005175 1.4e-62 243.8 251 54.6
PGSC0003DMG400002801 Solanum tuberosum HOM05D004265 ORTHO05D005175 1.4e-62 243.8 267 61.4
Solyc01g100480.3 Solanum lycopersicum HOM05D004265 ORTHO05D005175 1.9e-62 243.4 252 63.1
EL10Ac4g09452 Beta vulgaris HOM05D004265 ORTHO05D005175 7.1e-62 241.5 209 64.6
HPP92_026862 Vanilla planifolia HOM05D004265 ORTHO05D005175 7.1e-62 241.5 220 57.7
Nitab4.5_0000368g0100 Nicotiana tabacum HOM05D004265 ORTHO05D005175 9.3e-62 241.1 265 60.0
GSVIVG01031240001 Vitis vinifera HOM05D004265 ORTHO05D005175 2.1e-61 240.0 242 57.9
Nitab4.5_0004873g0020 Nicotiana tabacum HOM05D004265 ORTHO05D005175 2.7e-61 239.6 254 60.2
Ca_09300_v3 Cicer arietinum L. HOM05D001672 ORTHO05D007349 3.5e-61 239.2 219 56.6
FAN05G3791 Fragaria x ananassa HOM05D004265 ORTHO05D005175 7.9e-61 238.0 218 67.9
FAN09G1150 Fragaria x ananassa HOM05D004265 ORTHO05D005175 7.9e-61 238.0 218 67.9
Sabra05G0011400 Salix brachista HOM05D004265 ORTHO05D005175 1.0e-60 237.7 214 55.6
Sopen01g043990 Solanum pennellii HOM05D004265 ORTHO05D005175 1.0e-60 237.7 215 68.4
Psat3g012800 Pisum sativum HOM05D004265 ORTHO05D005175 1.8e-60 236.9 199 66.8
Glyma.19G228500 Glycine max HOM05D004265 ORTHO05D005175 3.0e-60 236.1 217 55.8
Lalb_Chr18g0046091 Lupinus albus HOM05D004265 ORTHO05D005175 3.9e-60 235.7 198 60.1
CDE11G0488 Ceratophyllum demersum HOM05D004265 ORTHO05D005175 6.7e-60 235.0 210 68.6
C09p24060 Brassica napus HOM05D004265 ORTHO05D005175 8.7e-60 234.6 227 65.2
Potri.013G008700 Populus trichocarpa HOM05D004265 ORTHO05D005175 1.1e-59 234.2 210 56.2
ATR0796G255 Amborella trichopoda HOM05D004265 ORTHO05D005175 2.5e-59 233.0 224 66.1
BcaC04g22056 Brassica carinata HOM05D004265 ORTHO05D005175 7.4e-59 231.5 227 64.8
BolC9t55323H Brassica oleracea HOM05D004265 ORTHO05D005175 7.4e-59 231.5 227 64.8
Lj5P334T30 Lonicera japonica HOM05D004265 ORTHO05D005175 9.7e-59 231.1 201 68.7
FvH4_6g07440 Fragaria vesca HOM05D004265 ORTHO05D005175 1.3e-58 230.7 218 66.5
FAN14G5021 Fragaria x ananassa HOM05D004265 ORTHO05D005175 1.3e-58 230.7 218 66.5
VMungo1383G0172 Vigna mungo HOM05D004265 ORTHO05D005175 1.6e-58 230.3 198 64.6
Ah.04g158690 Amaranthus hybridus HOM05D004265 ORTHO05D005175 2.2e-58 229.9 194 63.4
Zm00001eb396130 Zea mays HOM05D004265 ORTHO05D005175 2.2e-58 229.9 236 53.0
Sp2g06420 Schrenkiella parvula HOM05D004265 ORTHO05D005175 2.8e-58 229.6 215 56.3
SEGI_19544 Sequoiadendron giganteum HOM05D004265 ORTHO05D005175 2.8e-58 229.6 198 70.7
Medtr7g112120 Medicago truncatula HOM05D004265 ORTHO05D005175 1.1e-57 227.6 199 60.8
Phvul.001G225100 Phaseolus vulgaris HOM05D004265 ORTHO05D005175 1.4e-57 227.3 198 55.6
Duzib177G0587 Durio zibethinus HOM05D004265 ORTHO05D005175 6.9e-57 224.9 225 54.7
Psat0s3400g0040 Pisum sativum HOM05D004265 ORTHO05D005175 4.5e-56 222.2 253 58.5
Gohir.A13G175800 Gossypium hirsutum HOM05D004265 ORTHO05D005175 5.9e-56 221.9 249 57.4
BraA09t37526Z Brassica rapa HOM05D004265 ORTHO05D005175 7.7e-56 221.5 227 62.6
Thhalv10023634m.g Eutrema salsugineum HOM05D004265 ORTHO05D005175 1.7e-55 220.3 198 69.2
Manes.09G176700 Manihot esculenta HOM05D004265 ORTHO05D005175 2.2e-55 219.9 248 50.8
Manes.08G111300 Manihot esculenta HOM05D004265 ORTHO05D005175 3.8e-55 219.2 199 55.8
BcaB07g31123 Brassica carinata HOM05D004265 ORTHO05D005175 5.0e-55 218.8 227 62.6
Gohir.D13G181500 Gossypium hirsutum HOM05D004265 ORTHO05D005175 6.5e-55 218.4 249 57.0
Gorai.013G207000 Gossypium raimondii HOM05D004265 ORTHO05D005175 6.5e-55 218.4 249 57.0
MD04G1193100 Malus domestica HOM05D004265 ORTHO05D005175 1.9e-54 216.9 210 65.2
FAN02G3541 Fragaria x ananassa HOM05D004265 ORTHO05D005175 3.2e-54 216.1 201 67.2
THA.LOC104816889 Tarenaya hassleriana HOM05D004265 ORTHO05D005175 9.4e-54 214.5 215 61.4
A09p19080 Brassica napus HOM05D004265 ORTHO05D005175 1.2e-53 214.2 227 61.2
CiPaw.07G029600 Carya illinoinensis HOM05D004265 ORTHO05D005175 1.0e-52 211.1 218 51.8
Cfa006702 Carpinus fangiana HOM05D004265 ORTHO05D005175 1.8e-52 210.3 237 50.2
Peaxi162Scf00750g00013 Petunia axillaris HOM05D001712 ORTHO05D001731 3.0e-52 209.5 184 57.6
Ca_10171_v3 Cicer arietinum L. HOM05D004265 ORTHO05D005175 6.7e-52 208.4 247 51.0
Glyma.03G231300 Glycine max HOM05D004265 ORTHO05D005175 1.5e-51 207.2 226 55.8
HPP92_003567 Vanilla planifolia HOM05D004265 ORTHO05D005175 1.5e-51 207.2 251 55.4
Aa31LG2G11490 Aethionema arabicum HOM05D004265 ORTHO05D005175 2.8e-50 203.0 199 62.3
Peaxi162Scf00484g00005 Petunia axillaris HOM05D004265 ORTHO05D005175 2.8e-50 203.0 205 54.1
ClCG00G002440 Citrullus lanatus HOM05D004265 ORTHO05D005175 6.3e-50 201.8 253 56.9
ClCG02G014940 Citrullus lanatus HOM05D004265 ORTHO05D005175 6.3e-50 201.8 253 56.9
Oeu013207.1 Olea europaea HOM05D004265 ORTHO05D005175 3.1e-49 199.5 165 58.2
Lsat_1_v5_gn_9_122281 Lactuca sativa HOM05D004265 ORTHO05D005175 4.1e-49 199.1 202 49.5
SHI18053 Sapria himalayana HOM05D001712 ORTHO05D001731 2.6e-48 196.4 191 50.8
MELO3C004187.2 Cucumis melo HOM05D004265 ORTHO05D005175 2.2e-47 193.4 260 55.8
Gohir.A11G293141 Gossypium hirsutum HOM05D004265 ORTHO05D005175 2.9e-47 193.0 202 61.4
Gohir.D11G299703 Gossypium hirsutum HOM05D004265 ORTHO05D005175 2.9e-47 193.0 202 61.4
Gohir.D11G307566 Gossypium hirsutum HOM05D004265 ORTHO05D005175 2.9e-47 193.0 202 61.4
Gorai.007G338000 Gossypium raimondii HOM05D004265 ORTHO05D005175 2.9e-47 193.0 202 61.4
HanXRQChr03g0072861 Helianthus annuus HOM05D004265 ORTHO05D005175 3.8e-47 192.6 202 48.0
Zm00001eb014630 Zea mays HOM05D004265 ORTHO05D005175 5.0e-47 192.2 205 51.7
Actinidia25851 Actinidia chinensis HOM05D004265 ORTHO05D005175 5.5e-46 188.7 203 50.7
CSS0024329 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 2.7e-45 186.4 205 49.8
Haze_04061 Corylus avellana HOM05D004265 ORTHO05D005175 3.6e-45 186.0 233 45.9
CSS0041734 Camellia sinensis var. sinensis HOM05D004265 ORTHO05D005175 6.1e-45 185.3 205 49.3
DCAR_005425 Daucus carota HOM05D004265 ORTHO05D005175 7.9e-45 184.9 149 61.7
DCAR_025282 Daucus carota HOM05D004265 ORTHO05D005175 1.0e-44 184.5 149 67.8
SMO119G0102 Selaginella moellendorffii HOM05D004265 ORTHO05D005175 1.1e-43 181.0 184 48.9
COL.COLO4_05553 Corchorus olitorius HOM05D004265 ORTHO05D005175 1.5e-43 180.6 213 58.2
TAR362G0651 Trochodendron aralioides HOM05D004265 ORTHO05D005175 9.7e-43 177.9 148 78.4
DCAR_029352 Daucus carota HOM05D004265 ORTHO05D005175 2.2e-42 176.8 181 56.9
Oeu016567.1 Olea europaea HOM05D004265 ORTHO05D005175 1.8e-41 173.7 124 66.9
Rhsim01G0290900 Rhododendron simsii HOM05D004265 ORTHO05D005175 7.0e-41 171.8 194 48.5
AagrBONN_evm.TU.Sc2ySwM_228.834 Anthoceros agrestis HOM05D004265 ORTHO05D005175 5.9e-40 168.7 193 44.0
arahy.Tifrunner.gnm1.ann1.7KQ9VF Arachis hypogaea HOM05D004265 ORTHO05D005175 7.7e-40 168.3 198 54.5
arahy.Tifrunner.gnm1.ann1.K90Y16 Arachis hypogaea HOM05D004265 ORTHO05D005175 7.7e-40 168.3 198 54.5
Dinv10100 Davidia involucrata HOM05D004265 ORTHO05D005175 9.4e-38 161.4 199 46.7
SEGI_10604 Sequoiadendron giganteum HOM05D004265 ORTHO05D005175 1.2e-37 161.0 179 46.9
CsaV3_2G007060 Cucumis sativus L. HOM05D004265 ORTHO05D005175 3.0e-36 156.4 208 58.2
Lj2A1205T38 Lonicera japonica HOM05D004265 ORTHO05D005175 8.8e-36 154.8 194 45.4
Sed0005794 Sechium edule HOM05D004265 ORTHO05D005175 1.5e-35 154.1 221 39.8
GSVIVG01019978001 Vitis vinifera HOM05D000618 ORTHO05D000454 6.3e-34 148.7 195 44.1
Hma1.2p1_0486F.1_g163300 Hydrangea macrophylla HOM05D004265 ORTHO05D005175 4.5e-32 142.5 151 46.4
CAN.G100.73 Capsicum annuum HOM05D004265 ORTHO05D005175 3.8e-31 139.4 199 38.7
Solyc01g079460.2 Solanum lycopersicum HOM05D004265 ORTHO05D005175 1.1e-30 137.9 195 39.0
Sopen01g031230 Solanum pennellii HOM05D004265 ORTHO05D005175 1.1e-30 137.9 195 38.5
Pp3c8_19980 Physcomitrium patens HOM05D004265 ORTHO05D005175 2.5e-30 136.7 194 38.1
PGSC0003DMG400009008 Solanum tuberosum HOM05D004265 ORTHO05D005175 7.2e-30 135.2 186 38.2
TPR.G1662 Trifolium pratense HOM05D004265 ORTHO05D005175 7.2e-30 135.2 219 39.3
Nitab4.5_0003540g0020 Nicotiana tabacum HOM05D004265 ORTHO05D005175 1.6e-29 134.0 193 39.4
Pp3c20_10160 Physcomitrium patens HOM05D004265 ORTHO05D005175 3.6e-29 132.9 262 34.0
Mapoly0127s0047 Marchantia polymorpha HOM05D004265 ORTHO05D005175 1.0e-28 131.3 194 36.1
Lsat_1_v5_gn_3_11681 Lactuca sativa HOM05D004265 ORTHO05D005175 6.8e-28 128.6 132 51.5
CDE05G2260 Ceratophyllum demersum HOM05D004265 ORTHO05D005175 8.3e-26 121.7 125 59.2
SalBow2G0857 Salvia bowleyana HOM05D004265 ORTHO05D005175 1.3e-23 114.4 197 34.0
Peaxi162Scf00691g00218 Petunia axillaris HOM05D004265 ORTHO05D005175 8.0e-21 105.1 152 36.2
DCAR_018300 Daucus carota HOM05D004265 ORTHO05D005175 1.8e-20 104.0 194 35.6
Nitab4.5_0008277g0030 Nicotiana tabacum HOM05D004265 ORTHO05D005175 6.8e-20 102.1 151 35.1
Lsat_1_v5_gn_9_123981 Lactuca sativa HOM05D001336 ORTHO05D001211 2.0e-16 90.5 67 65.7
Lsat_1_v5_gn_7_81020 Lactuca sativa HOM05D004265 ORTHO05D005175 5.9e-16 89.0 61 68.9
Lsat_1_v5_gn_6_35861 Lactuca sativa HOM05D004265 ORTHO05D005175 2.9e-15 86.7 59 66.1
Thecc.01G291900 Theobroma cacao HOM05D004265 ORTHO05D005175 5.0e-15 85.9 106 42.5
CiPaw.14G122500 Carya illinoinensis HOM05D002542 ORTHO05D012505 8.9e-12 75.1 60 65.0
QL03p013641 Quercus lobata HOM05D004265 ORTHO05D005175 3.7e-10 69.7 39 82.1
Duzib133G1105 Durio zibethinus HOM05D004265 ORTHO05D045180 7.0e-09 65.5 218 24.3
arahy.Tifrunner.gnm1.ann1.F5CMD4 Arachis hypogaea HOM05D004265 ORTHO05D005175 2.0e-08 63.9 157 26.8
Thecc.01G313500 Theobroma cacao HOM05D004265 ORTHO05D045180 5.6e-06 55.8 220 23.6


User provided reference genes

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