Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 1.6e-71 272.7 139 100.0
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 1.6e-71 272.7 139 100.0
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 3.5e-71 271.6 139 99.3
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 1.9e-69 265.8 139 97.1
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 1.9e-69 265.8 139 97.1
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 4.7e-68 261.2 139 95.7
SGA_v2.0_scaffold30G12367 Striga asiatica HOM05D011630 ORTHO05D014269 5.7e-66 254.2 139 93.5
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 1.0e-62 243.4 125 98.4
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 2.2e-62 242.3 126 96.0
SGA_v2.0_scaffold366G50026 Striga asiatica HOM05D011630 ORTHO05D014269 3.6e-52 208.4 110 92.7
SGA_v2.0_scaffold30G12563 Striga asiatica HOM05D011630 ORTHO05D002863 6.6e-22 107.8 69 82.6
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 3.5e-15 85.5 98 49.0
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-13 80.5 63 55.6
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 1.9e-13 79.7 66 56.1
SGA_v2.0_scaffold150G36678 Striga asiatica HOM05D011630 ORTHO05D014269 2.0e-10 69.7 66 50.0
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 7.6e-10 67.8 103 39.8
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-09 67.0 119 34.5
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 3.2e-08 62.4 60 51.7
SGA_v2.0_scaffold14G06948 Striga asiatica HOM05D001383 ORTHO05D000309 3.2e-08 62.4 45 53.3
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 5.4e-08 61.6 60 45.0
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 9.3e-08 60.8 60 45.0
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 9.3e-08 60.8 60 45.0
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 9.3e-08 60.8 60 45.0
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-07 60.1 59 45.8
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-07 59.7 60 45.0
SGA_v2.0_scaffold12G06209 Striga asiatica HOM05D000403 ORTHO05D000350 2.1e-07 59.7 52 55.8
PGSC0003DMG400008721 Solanum tuberosum HOM05D009408 ORTHO05D000309 2.7e-07 59.3 136 35.3
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-07 58.9 60 43.3
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 3.5e-07 58.9 81 38.3
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-07 58.5 83 39.8
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-07 58.5 60 43.3
SGA_v2.0_scaffold8G04646 Striga asiatica HOM05D000134 ORTHO05D000168 4.6e-07 58.5 47 59.6
Solyc10g055427.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 6.0e-07 58.2 139 33.8
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 7.9e-07 57.8 59 49.2
Solyc09g072730.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 7.9e-07 57.8 139 33.8
SGA_v2.0_scaffold100G29657 Striga asiatica HOM05D001383 ORTHO05D000309 7.9e-07 57.8 54 46.3
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 7.9e-07 57.8 44 56.8
COL.COLO4_10433 Corchorus olitorius HOM05D023691 ORTHO05D000309 1.0e-06 57.4 47 46.8
Solyc10g080784.1 Solanum lycopersicum HOM05D008169 ORTHO05D004497 1.0e-06 57.4 104 36.5
SGA_v2.0_scaffold670G53420 Striga asiatica HOM05D001383 ORTHO05D000309 1.0e-06 57.4 54 46.3
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 1.3e-06 57.0 48 54.2
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.0 141 31.2
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.0 60 43.3
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-06 57.0 81 37.0
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 1.3e-06 57.0 45 51.1
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 1.7e-06 56.6 45 48.9
SGA_v2.0_scaffold364G49972 Striga asiatica HOM05D001383 ORTHO05D000309 1.7e-06 56.6 41 51.2
SGA_v2.0_scaffold45G16985 Striga asiatica HOM05D001383 ORTHO05D000309 1.7e-06 56.6 41 51.2
AUR62024396 Chenopodium quinoa HOM05D005931 ORTHO05D005553 2.3e-06 56.2 90 33.3
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 2.3e-06 56.2 61 45.9
PGSC0003DMG400029733 Solanum tuberosum HOM05D009408 ORTHO05D000309 2.3e-06 56.2 136 34.6
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 3.0e-06 55.8 41 53.7
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 3.0e-06 55.8 41 53.7
Solyc12g062733.2 Solanum lycopersicum HOM05D009408 ORTHO05D000309 3.0e-06 55.8 136 33.8
PGSC0003DMG400014126 Solanum tuberosum HOM05D009408 ORTHO05D000309 3.0e-06 55.8 105 37.1
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 3.0e-06 55.8 90 33.3
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 3.9e-06 55.5 87 37.9
Solyc03g096303.1 Solanum lycopersicum HOM05D009408 ORTHO05D000309 3.9e-06 55.5 111 30.6
AUR62015041 Chenopodium quinoa HOM05D005931 ORTHO05D005553 5.1e-06 55.1 91 30.8
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 5.1e-06 55.1 41 51.2
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-06 55.1 135 29.6
PGSC0003DMG400041825 Solanum tuberosum HOM05D009408 ORTHO05D000309 5.1e-06 55.1 136 35.3
vmacro00766 Vaccinium macrocarpon HOM05D001383 ORTHO05D000309 5.1e-06 55.1 48 47.9
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 6.6e-06 54.7 79 38.0
Dinv05615 Davidia involucrata HOM05D001383 ORTHO05D000309 6.6e-06 54.7 43 55.8
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 6.6e-06 54.7 141 30.5
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 6.6e-06 54.7 119 32.8
SGA_v2.0_scaffold55G19817 Striga asiatica HOM05D001383 ORTHO05D000309 6.6e-06 54.7 45 46.7
CAN.G11.43 Capsicum annuum HOM05D009408 ORTHO05D000309 8.7e-06 54.3 47 53.2
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 8.7e-06 54.3 91 34.1
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 8.7e-06 54.3 52 46.2
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 8.7e-06 54.3 139 30.2


User provided reference genes

Program Settings