Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold534G52761 Striga asiatica HOM05D001803 ORTHO05D001686 1.5e-80 302.8 149 100.0
SGA_v2.0_scaffold534G52758 Striga asiatica HOM05D001803 ORTHO05D001686 8.1e-10 67.8 40 85.0
Actinidia17841 Actinidia chinensis HOM05D001803 ORTHO05D001686 1.3e-07 60.5 27 100.0
Actinidia27931 Actinidia chinensis HOM05D001803 ORTHO05D001686 1.3e-07 60.5 27 100.0
MSTRG.5377 Avicennia marina HOM05D001803 ORTHO05D001686 1.3e-07 60.5 30 90.0
CSS0003812 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 1.3e-07 60.5 27 100.0
CSS0005890 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 1.3e-07 60.5 27 100.0
SGA_v2.0_scaffold58G20598 Striga asiatica HOM05D001803 ORTHO05D001686 1.3e-07 60.5 27 100.0
TAR381G0847 Trochodendron aralioides HOM05D001803 ORTHO05D001686 1.3e-07 60.5 27 100.0
Migut.N01210 Erythranthe guttata HOM05D001803 ORTHO05D001686 2.2e-07 59.7 52 63.5
TAR628G0570 Trochodendron aralioides HOM05D001803 ORTHO05D001686 2.2e-07 59.7 27 96.3
DCAR_003624 Daucus carota HOM05D001803 ORTHO05D001686 2.9e-07 59.3 27 96.3
Actinidia00473 Actinidia chinensis HOM05D001803 ORTHO05D001686 3.8e-07 58.9 27 96.3
CSS0007865 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 4.9e-07 58.5 30 86.7
Lj9A364G58 Lonicera japonica HOM05D001803 ORTHO05D001686 4.9e-07 58.5 27 96.3
Manes.15G144800 Manihot esculenta HOM05D001803 ORTHO05D001686 4.9e-07 58.5 35 77.1
Aqoxy5G01411 Aquilegia oxysepala HOM05D001803 ORTHO05D001686 6.4e-07 58.2 27 92.6
CSS0007884 Camellia sinensis var. sinensis HOM05D001803 ORTHO05D001686 6.4e-07 58.2 30 86.7
CiPaw.05G057900 Carya illinoinensis HOM05D001803 ORTHO05D001686 6.4e-07 58.2 30 90.0
Cc02_g18290 Coffea canephora HOM05D001803 ORTHO05D001686 8.4e-07 57.8 26 96.2
Potri.009G108300 Populus trichocarpa HOM05D001803 ORTHO05D001686 8.4e-07 57.8 35 77.1
Sabra09G0082600 Salix brachista HOM05D001803 ORTHO05D001686 8.4e-07 57.8 58 53.4
MSTRG.20126 Avicennia marina HOM05D001803 ORTHO05D001686 1.1e-06 57.4 27 88.9
SalBow3G0744 Salvia bowleyana HOM05D001803 ORTHO05D001686 1.1e-06 57.4 30 86.7
GSVIVG01031845001 Vitis vinifera HOM05D001803 ORTHO05D001686 1.1e-06 57.4 27 96.3
MBI16_g19890_MAGBIO Magnolia biondii HOM05D001803 ORTHO05D001686 1.4e-06 57.0 27 88.9
SGA_v2.0_scaffold51G18895 Striga asiatica HOM05D001803 ORTHO05D001686 1.4e-06 57.0 79 40.5
Cfa004938 Carpinus fangiana HOM05D001803 ORTHO05D001686 1.9e-06 56.6 27 96.3
Haze_02472 Corylus avellana HOM05D001803 ORTHO05D001686 1.9e-06 56.6 27 96.3
MD10G1087600 Malus domestica HOM05D001803 ORTHO05D001686 1.9e-06 56.6 27 96.3
Nn6g32131 Nelumbo nucifera HOM05D001803 ORTHO05D001686 1.9e-06 56.6 27 88.9
QL11p039077 Quercus lobata HOM05D001803 ORTHO05D001686 1.9e-06 56.6 27 96.3
Rhsim05G0079300 Rhododendron simsii HOM05D001803 ORTHO05D001686 1.9e-06 56.6 27 92.6
vmacro19472 Vaccinium macrocarpon HOM05D001803 ORTHO05D001686 1.9e-06 56.6 27 92.6
CANSAT25G2950 Cannabis sativa HOM05D001803 ORTHO05D001686 2.4e-06 56.2 27 92.6
ClCG02G005570 Citrullus lanatus HOM05D001803 ORTHO05D001686 2.4e-06 56.2 27 92.6
MELO3C018420.2 Cucumis melo HOM05D001803 ORTHO05D001686 2.4e-06 56.2 27 92.6
CsaV3_7G010080 Cucumis sativus L. HOM05D001803 ORTHO05D001686 2.4e-06 56.2 27 92.6
Nn5g29394 Nelumbo nucifera HOM05D001803 ORTHO05D001686 2.4e-06 56.2 27 92.6
Sc08g0000230 Simmondsia chinensis HOM05D001803 ORTHO05D001686 2.4e-06 56.2 30 86.7
Dinv23603 Davidia involucrata HOM05D001803 ORTHO05D001686 3.2e-06 55.8 27 88.9
MD05G1073000 Malus domestica HOM05D001803 ORTHO05D001686 3.2e-06 55.8 27 92.6
Hma1.2p1_1353F.1_g277785 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 4.2e-06 55.5 27 88.9
Hma1.2p1_1353F.1_g277790 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 4.2e-06 55.5 27 88.9
Hma1.2p1_1527F.1_g289020 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 4.2e-06 55.5 27 88.9
Hma1.2p1_1527F.1_g289032 Hydrangea macrophylla HOM05D001803 ORTHO05D001686 4.2e-06 55.5 27 88.9
Prupe.8G113600 Prunus persica HOM05D001803 ORTHO05D001686 4.2e-06 55.5 27 92.6
SalBow6G5061 Salvia bowleyana HOM05D001803 ORTHO05D001686 4.2e-06 55.5 27 92.6
SGA_v2.0_scaffold55G19828 Striga asiatica HOM05D001803 ORTHO05D001686 4.2e-06 55.5 30 86.7
Atru.BG.61.p Acer truncatum HOM05D001803 ORTHO05D001686 5.5e-06 55.1 32 81.2
Ah.01g019940 Amaranthus hybridus HOM05D001803 ORTHO05D001686 5.5e-06 55.1 30 86.7
CiPaw.06G139800 Carya illinoinensis HOM05D001803 ORTHO05D001686 5.5e-06 55.1 27 92.6
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 5.5e-06 55.1 26 96.2
Migut.B00296 Erythranthe guttata HOM05D001803 ORTHO05D001686 5.5e-06 55.1 27 88.9
FvH4_2g07180 Fragaria vesca HOM05D001803 ORTHO05D001686 5.5e-06 55.1 26 96.2
FAN20G2247 Fragaria x ananassa HOM05D001803 ORTHO05D001686 5.5e-06 55.1 26 96.2
FAN24G0792 Fragaria x ananassa HOM05D001803 ORTHO05D001686 5.5e-06 55.1 26 96.2
Lsat_1_v5_gn_5_117520 Lactuca sativa HOM05D001803 ORTHO05D001686 5.5e-06 55.1 54 55.6
Lsat_1_v5_gn_7_87460 Lactuca sativa HOM05D001803 ORTHO05D001686 5.5e-06 55.1 26 96.2
vmacro02167 Vaccinium macrocarpon HOM05D001803 ORTHO05D001686 5.5e-06 55.1 27 88.9
Oeu034075.1 Olea europaea HOM05D001803 ORTHO05D001686 7.1e-06 54.7 27 88.9
Sed0007182 Sechium edule HOM05D001803 ORTHO05D001686 7.1e-06 54.7 26 92.3
HPP92_027076 Vanilla planifolia HOM05D001803 ORTHO05D001686 7.1e-06 54.7 79 44.3
Manes.17G096000 Manihot esculenta HOM05D001803 ORTHO05D001686 9.3e-06 54.3 32 78.1
PSO170G3016 Papaver somniferum HOM05D001803 ORTHO05D001686 9.3e-06 54.3 27 88.9
PSO210G6448 Papaver somniferum HOM05D001803 ORTHO05D001686 9.3e-06 54.3 27 88.9
Potri.004G146600 Populus trichocarpa HOM05D001803 ORTHO05D001686 9.3e-06 54.3 55 54.5
PGR042G2750 Punica granatum HOM05D001803 ORTHO05D001686 9.3e-06 54.3 27 92.6


User provided reference genes

Program Settings