Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold531G52752 Striga asiatica HOM05D024675 ORTHO05D020971 2.4e-215 751.9 383 100.0
SGA_v2.0_scaffold126G33930 Striga asiatica HOM05D024675 ORTHO05D020971 6.0e-41 172.6 156 60.9
SGA_v2.0_scaffold47G17795 Striga asiatica HOM05D024675 ORTHO05D403629 1.0e-24 118.6 104 67.3
SGA_v2.0_scaffold184G39920 Striga asiatica HOM05D024675 ORTHO05D020971 1.5e-12 78.2 45 77.8
SGA_v2.0_scaffold86G26866 Striga asiatica HOM05D003956 ORTHO05D004850 3.6e-09 67.0 31 96.8
Lj1A1088T17 Lonicera japonica HOM05D000423 ORTHO05D000284 6.1e-09 66.2 48 70.8
ClCG04G005690 Citrullus lanatus HOM05D000423 ORTHO05D000284 1.8e-08 64.7 79 44.3
unitig_37.g12783 Utricularia gibba HOM05D000423 ORTHO05D000284 5.2e-08 63.2 48 68.8
CsaV3_4G029470 Cucumis sativus L. HOM05D000423 ORTHO05D000284 6.7e-08 62.8 82 42.7
Eucgr.A02229 Eucalyptus grandis HOM05D000423 ORTHO05D000284 6.7e-08 62.8 48 66.7
HanXRQChr01g0008531 Helianthus annuus HOM05D000423 ORTHO05D000284 6.7e-08 62.8 48 68.8
CANSAT64G1523 Cannabis sativa HOM05D000423 ORTHO05D000284 1.1e-07 62.0 48 66.7
SGA_v2.0_scaffold66G22268 Striga asiatica HOM05D000423 ORTHO05D000284 1.1e-07 62.0 40 75.0
GSVIVG01025748001 Vitis vinifera HOM05D000423 ORTHO05D000284 1.1e-07 62.0 48 66.7
GSVIVG01025749001 Vitis vinifera HOM05D000423 ORTHO05D000284 1.1e-07 62.0 48 66.7
Prupe.7G031400 Prunus persica HOM05D000423 ORTHO05D000284 2.6e-07 60.8 48 64.6
MELO3C019102.2 Cucumis melo HOM05D000423 ORTHO05D000284 4.4e-07 60.1 50 60.0
Cpa.g.sc92.84 Carica papaya HOM05D000423 ORTHO05D000284 5.7e-07 59.7 48 66.7
Duzib128G0014 Durio zibethinus HOM05D000423 ORTHO05D000284 1.3e-06 58.5 44 68.2
Medtr7g089360 Medicago truncatula HOM05D000423 ORTHO05D000284 1.3e-06 58.5 48 64.6
Glyma.03G126000 Glycine max HOM05D000423 ORTHO05D000284 1.7e-06 58.2 48 66.7
Phvul.001G121100 Phaseolus vulgaris HOM05D000423 ORTHO05D000284 1.7e-06 58.2 48 66.7
Sed0023937 Sechium edule HOM05D000423 ORTHO05D000284 1.7e-06 58.2 74 40.5
VMungo1383G0850 Vigna mungo HOM05D000423 ORTHO05D000284 1.7e-06 58.2 48 66.7
DCAR_016884 Daucus carota HOM05D000423 ORTHO05D000284 2.2e-06 57.8 48 62.5
Glyma.19G128800 Glycine max HOM05D000423 ORTHO05D000284 2.8e-06 57.4 48 62.5
ECA248G3444 Erigeron canadensis HOM05D000423 ORTHO05D000284 3.7e-06 57.0 48 58.3
MBI16_g23751_MAGBIO Magnolia biondii HOM05D000423 ORTHO05D000284 8.2e-06 55.8 45 62.2


User provided reference genes

Program Settings