Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19242 Striga asiatica HOM05D007749 ORTHO05D009809 2.0e-71 272.3 140 100.0
Migut.B01511 Erythranthe guttata HOM05D007749 ORTHO05D009809 6.9e-43 177.6 126 72.2
Oeu037445.1 Olea europaea HOM05D007749 ORTHO05D009809 9.3e-40 167.2 125 67.2
unitig_61.g26426 Utricularia gibba HOM05D007749 ORTHO05D009809 2.3e-38 162.5 124 62.9
SalBow7G2644 Salvia bowleyana HOM05D007749 ORTHO05D009809 2.5e-37 159.1 120 66.7
TAR633G0982 Trochodendron aralioides HOM05D007749 ORTHO05D009809 1.8e-35 152.9 120 66.7
Manes.11G120200 Manihot esculenta HOM05D007749 ORTHO05D009809 2.4e-35 152.5 118 63.6
CsaV3_6G003910 Cucumis sativus L. HOM05D007749 ORTHO05D009809 5.3e-35 151.4 115 67.0
CANSAT56G0324 Cannabis sativa HOM05D007749 ORTHO05D009809 6.9e-35 151.0 115 63.5
CANSAT56G2176 Cannabis sativa HOM05D007749 ORTHO05D009809 6.9e-35 151.0 115 63.5
ClCG08G004660 Citrullus lanatus HOM05D007749 ORTHO05D009809 9.0e-35 150.6 115 65.2
MD04G1040200 Malus domestica HOM05D007749 ORTHO05D009809 2.0e-34 149.4 115 62.6
MELO3C011656.2 Cucumis melo HOM05D007749 ORTHO05D009809 4.5e-34 148.3 117 65.8
Psat1g007040 Pisum sativum HOM05D007749 ORTHO05D009809 5.8e-34 147.9 115 63.5
THA.LOC104803661 Tarenaya hassleriana HOM05D007749 ORTHO05D009809 7.6e-34 147.5 118 61.9
TWI15G0305 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 7.6e-34 147.5 118 61.9
TWI15G0741 Tripterygium wilfordii HOM05D007749 ORTHO05D009809 7.6e-34 147.5 118 61.9
Rhsim09G0028100 Rhododendron simsii HOM05D007749 ORTHO05D009809 1.3e-33 146.7 115 62.6
Sed0008576 Sechium edule HOM05D007749 ORTHO05D009809 1.3e-33 146.7 120 63.3
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 3.8e-33 145.2 119 63.0
QL10p048728 Quercus lobata HOM05D007749 ORTHO05D009809 3.8e-33 145.2 119 63.9
Lalb_Chr14g0372461 Lupinus albus HOM05D007749 ORTHO05D009809 1.9e-32 142.9 118 59.3
Aa31LG1G25110 Aethionema arabicum HOM05D007749 ORTHO05D009809 4.2e-32 141.7 118 61.0
CARHR138400 Cardamine hirsuta HOM05D007749 ORTHO05D009809 5.4e-32 141.4 119 60.5
Duzib151G1147 Durio zibethinus HOM05D007749 ORTHO05D009809 5.4e-32 141.4 124 55.6
VMungo1080G1081 Vigna mungo HOM05D007749 ORTHO05D009809 5.4e-32 141.4 121 61.2
Glyma.13G344000 Glycine max HOM05D007749 ORTHO05D009809 9.3e-32 140.6 123 58.5
BcaB06g29301 Brassica carinata HOM05D007749 ORTHO05D009809 1.6e-31 139.8 118 58.5
C04p70340 Brassica napus HOM05D007749 ORTHO05D009809 1.6e-31 139.8 118 58.5
BolC4t28537H Brassica oleracea HOM05D007749 ORTHO05D009809 1.6e-31 139.8 118 58.5
CAN.G845.29 Capsicum annuum HOM05D007749 ORTHO05D009809 2.1e-31 139.4 120 60.8
AUR62000855 Chenopodium quinoa HOM05D007749 ORTHO05D009809 2.1e-31 139.4 115 60.0
A04p32650 Brassica napus HOM05D007749 ORTHO05D009809 2.7e-31 139.0 118 57.6
Medtr2g098870 Medicago truncatula HOM05D007749 ORTHO05D009809 2.7e-31 139.0 118 59.3
Sopen08g003040 Solanum pennellii HOM05D007749 ORTHO05D009809 2.7e-31 139.0 119 59.7
AT2G43310 Arabidopsis thaliana HOM05D007749 ORTHO05D009809 3.5e-31 138.7 119 60.5
BcaC02g07190 Brassica carinata HOM05D007749 ORTHO05D009809 3.5e-31 138.7 118 57.6
BraA04t18728Z Brassica rapa HOM05D007749 ORTHO05D009809 3.5e-31 138.7 118 57.6
Nitab4.5_0005487g0020 Nicotiana tabacum HOM05D002689 ORTHO05D003129 3.5e-31 138.7 120 58.3
AUR62005121 Chenopodium quinoa HOM05D007749 ORTHO05D009809 4.6e-31 138.3 115 59.1
Thhalv10001764m.g Eutrema salsugineum HOM05D007749 ORTHO05D009809 4.6e-31 138.3 118 59.3
Lj3g0008958 Lotus japonicus HOM05D007749 ORTHO05D009809 7.9e-31 137.5 113 59.3
Lsat_1_v5_gn_5_23460 Lactuca sativa HOM05D007749 ORTHO05D009809 1.0e-30 137.1 115 60.0
Phvul.005G152700 Phaseolus vulgaris HOM05D007749 ORTHO05D009809 1.0e-30 137.1 121 58.7
DCAR_008501 Daucus carota HOM05D007749 ORTHO05D009809 1.3e-30 136.7 115 59.1
Sp4g25410 Schrenkiella parvula HOM05D007749 ORTHO05D009809 1.8e-30 136.3 115 59.1
PGSC0003DMG400020513 Solanum tuberosum HOM05D007749 ORTHO05D009809 3.0e-30 135.6 119 57.1
GSVIVG01010752001 Vitis vinifera HOM05D007749 ORTHO05D009809 3.0e-30 135.6 108 61.1
COL.COLO4_07660 Corchorus olitorius HOM05D007749 ORTHO05D009809 3.9e-30 135.2 121 52.9
FvH4_4g10741 Fragaria vesca HOM05D007749 ORTHO05D009809 3.9e-30 135.2 115 59.1
PGR142G0736 Punica granatum HOM05D007749 ORTHO05D009809 5.1e-30 134.8 138 52.9
CDE04G2919 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.1e-29 133.7 115 58.3
Carub.0004s2577 Capsella rubella HOM05D007749 ORTHO05D009809 3.3e-29 132.1 119 56.3
Thecc.04G180100 Theobroma cacao HOM05D007749 ORTHO05D009809 4.3e-29 131.7 123 52.0
Gohir.D10G129800 Gossypium hirsutum HOM05D007749 ORTHO05D009809 7.4e-29 131.0 124 51.6
Gohir.A10G136900 Gossypium hirsutum HOM05D007749 ORTHO05D009809 9.6e-29 130.6 128 49.2
AL4G41990 Arabidopsis lyrata HOM05D007749 ORTHO05D009809 1.3e-28 130.2 118 56.8
CDE07G1555 Ceratophyllum demersum HOM05D007749 ORTHO05D009809 1.6e-28 129.8 115 57.4
Gorai.011G143100 Gossypium raimondii HOM05D007749 ORTHO05D009809 1.6e-28 129.8 124 50.8
Potri.017G030200 Populus trichocarpa HOM05D007749 ORTHO05D009809 3.6e-28 128.6 120 60.8
ECA246G4014 Erigeron canadensis HOM05D007749 ORTHO05D009809 4.8e-28 128.3 119 54.6
Sabra07G0104500 Salix brachista HOM05D007749 ORTHO05D009809 1.1e-27 127.1 118 58.5
CiPaw.02G055000 Carya illinoinensis HOM05D007749 ORTHO05D009809 1.4e-27 126.7 117 55.6
Eucgr.H00373 Eucalyptus grandis HOM05D007749 ORTHO05D009809 1.8e-27 126.3 119 58.0
Cc00_g14450 Coffea canephora HOM05D007749 ORTHO05D009809 4.0e-27 125.2 118 53.4
Potri.007G128100 Populus trichocarpa HOM05D007749 ORTHO05D009809 1.5e-26 123.2 120 60.0
MD07G1093600 Malus domestica HOM05D007749 ORTHO05D009809 2.6e-26 122.5 92 63.0
Glyma.15G030300 Glycine max HOM05D007749 ORTHO05D009809 3.4e-26 122.1 105 58.1
Atru.chr3.1496 Acer truncatum HOM05D007749 ORTHO05D009809 9.9e-26 120.6 118 52.5
Aqoxy7G01786 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 9.9e-26 120.6 126 49.2
Sc25g0002390 Simmondsia chinensis HOM05D007749 ORTHO05D009809 9.9e-26 120.6 94 62.8
Aqoxy7G01782 Aquilegia oxysepala HOM05D007749 ORTHO05D009809 1.3e-25 120.2 126 49.2
BcaB06g29300 Brassica carinata HOM05D007749 ORTHO05D009809 1.3e-25 120.2 93 63.4
Prupe.1G192700 Prunus persica HOM05D007749 ORTHO05D009809 8.4e-25 117.5 103 58.3
HanXRQChr02g0051151 Helianthus annuus HOM05D007749 ORTHO05D009809 1.9e-24 116.3 123 50.4
Ca_01260_v3 Cicer arietinum L. HOM05D007749 ORTHO05D009809 5.5e-24 114.8 92 57.6
MD07G1010900 Malus domestica HOM05D007749 ORTHO05D009809 7.1e-24 114.4 103 56.3
ATR0824G043 Amborella trichopoda HOM05D007749 ORTHO05D009809 1.2e-23 113.6 111 49.5
Ciclev10022681m.g Citrus clementina HOM05D007749 ORTHO05D009809 3.5e-23 112.1 120 50.0
Sc04g0006060 Simmondsia chinensis HOM05D007749 ORTHO05D009809 3.0e-22 109.0 95 57.9
PGSC0003DMG400020496 Solanum tuberosum HOM05D007749 ORTHO05D009809 1.1e-21 107.1 89 58.4
HPP92_012796 Vanilla planifolia HOM05D007749 ORTHO05D009809 4.8e-20 101.7 117 47.0
QL02p093050 Quercus lobata HOM05D000759 ORTHO05D000574 6.2e-20 101.3 100 53.0
Prupe.1G193800 Prunus persica HOM05D007749 ORTHO05D009809 6.9e-19 97.8 89 52.8
Nitab4.5_0010461g0010 Nicotiana tabacum HOM05D002689 ORTHO05D003129 3.8e-17 92.0 78 55.1
Actinidia35976 Actinidia chinensis HOM05D007749 ORTHO05D009809 1.9e-16 89.7 115 47.0
Actinidia34603 Actinidia chinensis HOM05D007749 ORTHO05D009809 3.2e-16 89.0 120 45.8
QL04p015298 Quercus lobata HOM05D007749 ORTHO05D009809 4.2e-16 88.6 89 50.6
SGA_v2.0_scaffold189G40346 Striga asiatica HOM05D007749 ORTHO05D009809 7.4e-13 77.8 46 87.0
SEGI_37948 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 3.1e-11 72.4 117 32.5
HPP92_012728 Vanilla planifolia HOM05D007749 ORTHO05D009809 6.9e-11 71.2 117 39.3
MD08G1180100 Malus domestica HOM05D007749 ORTHO05D009809 1.9e-08 63.2 52 65.4
SEGI_10158 Sequoiadendron giganteum HOM05D007749 ORTHO05D009809 4.6e-07 58.5 83 33.7


User provided reference genes

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