Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19239 Striga asiatica HOM05D022335 ORTHO05D009940 4.2e-89 331.3 160 100.0
SGA_v2.0_scaffold56G20041 Striga asiatica HOM05D000045 ORTHO05D009940 2.9e-29 132.5 121 61.2
SGA_v2.0_scaffold126G33925 Striga asiatica HOM05D000045 ORTHO05D009940 3.8e-29 132.1 121 61.2
SGA_v2.0_scaffold515G52659 Striga asiatica HOM05D000045 ORTHO05D009940 3.5e-27 125.6 192 45.3
SGA_v2.0_scaffold36G14482 Striga asiatica HOM05D024854 ORTHO05D009940 1.1e-20 104.0 214 32.2
SGA_v2.0_scaffold109G31025 Striga asiatica HOM05D000045 ORTHO05D002701 9.3e-20 100.9 182 32.4
SGA_v2.0_scaffold106G30721 Striga asiatica HOM05D000045 ORTHO05D009940 5.1e-18 95.1 211 31.3
SGA_v2.0_scaffold2874G54232 Striga asiatica HOM05D000045 ORTHO05D002701 9.6e-17 90.9 112 43.8
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.0e-15 84.3 84 44.0
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.0e-15 84.3 84 44.0
TWI60G1550 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-14 84.0 84 44.0
SGA_v2.0_scaffold18G08264 Striga asiatica HOM05D000045 ORTHO05D009940 1.0e-13 80.9 152 35.5
SGA_v2.0_scaffold33G13568 Striga asiatica HOM05D027553 ORTHO05D014193 1.0e-13 80.9 180 33.9
SGA_v2.0_scaffold108G30830 Striga asiatica HOM05D000045 ORTHO05D009940 1.3e-13 80.5 121 38.8
SGA_v2.0_scaffold4G01942 Striga asiatica HOM05D000045 ORTHO05D009940 1.3e-13 80.5 121 39.7
AUR62026910 Chenopodium quinoa HOM05D007645 ORTHO05D009183 2.9e-13 79.3 132 37.9
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.8e-13 79.0 84 45.2
SGA_v2.0_scaffold18G08258 Striga asiatica HOM05D027553 ORTHO05D009940 1.9e-12 76.6 152 35.5
TWI56G1316 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.9e-12 76.6 84 42.9
TWI59G0983 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.5e-12 76.3 61 52.5
SGA_v2.0_scaffold68G22942 Striga asiatica HOM05D000045 ORTHO05D002701 3.2e-12 75.9 66 56.1
Prupe.1G268400 Prunus persica HOM05D000045 ORTHO05D009940 5.5e-12 75.1 62 48.4
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 5.5e-12 75.1 62 48.4
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-11 73.9 58 55.2
SGA_v2.0_scaffold263G45977 Striga asiatica HOM05D000045 ORTHO05D009940 1.6e-11 73.6 60 51.7
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 2.1e-11 73.2 63 47.6
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 6.1e-11 71.6 63 44.4
PSO591G0277 Papaver somniferum HOM05D000045 ORTHO05D009940 1.0e-10 70.9 68 42.6
SGA_v2.0_scaffold240G44110 Striga asiatica HOM05D000045 ORTHO05D002701 1.8e-10 70.1 86 41.9
SGA_v2.0_scaffold29G12201 Striga asiatica HOM05D000045 ORTHO05D002701 1.8e-10 70.1 124 36.3
PSO063G1228 Papaver somniferum HOM05D000045 ORTHO05D000067 2.3e-10 69.7 63 46.0
SGA_v2.0_scaffold157G37343 Striga asiatica HOM05D000045 ORTHO05D002701 2.3e-10 69.7 66 48.5
SGA_v2.0_scaffold240G44111 Striga asiatica HOM05D000045 ORTHO05D002701 2.3e-10 69.7 66 48.5
TWI34G1375 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 2.3e-10 69.7 62 45.2
TWI60G0659 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 2.3e-10 69.7 61 45.9
TWI74G0350 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 2.3e-10 69.7 62 45.2
TWI39G0068 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.0e-10 69.3 53 56.6
TWI39G0460 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.0e-10 69.3 53 56.6
TWI81G0019 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.0e-10 69.3 61 47.5
PSO675G3853 Papaver somniferum HOM05D000045 ORTHO05D000067 6.7e-10 68.2 63 44.4
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 6.7e-10 68.2 66 34.8
vmacro09617 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 8.7e-10 67.8 91 40.7
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 1.5e-09 67.0 68 39.7
PSO675G4083 Papaver somniferum HOM05D000045 ORTHO05D000067 1.5e-09 67.0 68 41.2
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-09 67.0 73 41.1
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-09 67.0 73 41.1
SGA_v2.0_scaffold109G31088 Striga asiatica HOM05D000045 ORTHO05D009940 1.5e-09 67.0 208 26.4
SGA_v2.0_scaffold35G14139 Striga asiatica HOM05D000045 ORTHO05D009940 1.5e-09 67.0 176 25.0
TWI59G1432 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.5e-09 67.0 57 50.9
ECA238G0146 Erigeron canadensis HOM05D000045 ORTHO05D000067 1.9e-09 66.6 90 38.9
Hma1.2p1_0531F.1_g173385 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 1.9e-09 66.6 82 39.0
Hma1.2p1_0531F.1_g173390 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 1.9e-09 66.6 82 39.0
ECA238G2966 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.5e-09 66.2 71 42.3
FvH4_3g17011 Fragaria vesca HOM05D000045 ORTHO05D009940 2.5e-09 66.2 62 43.5
Hma1.2p1_0002F.1_g002660 Hydrangea macrophylla HOM05D000045 ORTHO05D012494 2.5e-09 66.2 64 40.6
PSO675G7638 Papaver somniferum HOM05D000045 ORTHO05D009940 3.3e-09 65.9 68 38.2
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 3.3e-09 65.9 79 36.7
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.7e-09 65.1 58 46.6
PSO210G5073 Papaver somniferum HOM05D000045 ORTHO05D009940 5.7e-09 65.1 122 32.8
ECA240G2928 Erigeron canadensis HOM05D000006 ORTHO05D000091 7.4e-09 64.7 68 45.6
FvH4_4g07801 Fragaria vesca HOM05D000045 ORTHO05D000067 7.4e-09 64.7 59 45.8
TWI12G1011 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 7.4e-09 64.7 83 38.6
TWI60G1645 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 9.7e-09 64.3 80 38.8
TWI18G1436 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.3e-08 63.9 82 37.8
vmacro17252 Vaccinium macrocarpon HOM05D000045 ORTHO05D009940 1.3e-08 63.9 84 36.9
PSO832G2963 Papaver somniferum HOM05D000045 ORTHO05D000067 1.6e-08 63.5 84 42.9
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 1.6e-08 63.5 58 48.3
Atru.chr12.1768 Acer truncatum HOM05D000045 ORTHO05D009940 2.2e-08 63.2 64 43.8
MD05G1027500 Malus domestica HOM05D000045 ORTHO05D009940 2.2e-08 63.2 61 41.0
PSO063G3008 Papaver somniferum HOM05D000045 ORTHO05D000067 2.2e-08 63.2 119 31.1
PSO017G4977 Papaver somniferum HOM05D000045 ORTHO05D000067 2.8e-08 62.8 69 42.0
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 2.8e-08 62.8 58 48.3
TWI31G0500 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.8e-08 62.8 58 46.6
TWI77G0218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.8e-08 62.8 60 40.0
TWI81G0958 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.8e-08 62.8 58 46.6
Prupe.2G013600 Prunus persica HOM05D000045 ORTHO05D000067 4.8e-08 62.0 45 53.3
TWI12G1108 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.8e-08 62.0 74 41.9
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.8e-08 62.0 61 44.3
PSO017G5661 Papaver somniferum HOM05D000045 ORTHO05D000067 6.3e-08 61.6 53 47.2
TWI15G0461 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.3e-08 61.6 63 47.6
Atru.chr7.967 Acer truncatum HOM05D000045 ORTHO05D000067 1.1e-07 60.8 79 36.7
PSO478G4428 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-07 60.8 64 45.3
AUR62042467 Chenopodium quinoa HOM05D008156 ORTHO05D009940 1.8e-07 60.1 100 34.0
PGR044G2471 Punica granatum HOM05D000045 ORTHO05D000067 1.8e-07 60.1 61 44.3
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.4e-07 59.7 104 34.6
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 2.4e-07 59.7 89 33.7
Hma1.2p1_3064F.1_g332250 Hydrangea macrophylla HOM05D000045 ORTHO05D009940 2.4e-07 59.7 58 43.1
TWI79G1745 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 2.4e-07 59.7 62 40.3
AUR62033700 Chenopodium quinoa HOM05D008156 ORTHO05D010348 4.1e-07 58.9 170 27.1
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 4.1e-07 58.9 71 42.3
PSO017G3980 Papaver somniferum HOM05D000045 ORTHO05D000067 4.1e-07 58.9 64 43.8
SGA_v2.0_scaffold29G12137 Striga asiatica HOM05D000045 ORTHO05D009940 5.3e-07 58.5 73 39.7
SGA_v2.0_scaffold48G18048 Striga asiatica HOM05D022335 ORTHO05D025952 5.3e-07 58.5 40 62.5
PSO675G0011 Papaver somniferum HOM05D000045 ORTHO05D000067 9.0e-07 57.8 66 39.4
CANSAT78G0103 Cannabis sativa HOM05D000045 ORTHO05D000067 1.2e-06 57.4 62 46.8
PSO063G2828 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-06 57.4 53 45.3
PSO210G6125 Papaver somniferum HOM05D000045 ORTHO05D009940 1.2e-06 57.4 122 31.1
PSO765G0007 Papaver somniferum HOM05D000045 ORTHO05D000067 1.2e-06 57.4 60 46.7
AUR62041660 Chenopodium quinoa HOM05D000045 ORTHO05D009940 1.5e-06 57.0 95 32.6
AUR62043877 Chenopodium quinoa HOM05D008156 ORTHO05D010348 1.5e-06 57.0 68 39.7
PSO732G0186 Papaver somniferum HOM05D000045 ORTHO05D000067 1.5e-06 57.0 55 45.5
Psat0s1608g0040 Pisum sativum HOM05D000045 ORTHO05D009940 1.5e-06 57.0 59 35.6
Psat5g030640 Pisum sativum HOM05D000045 ORTHO05D009940 1.5e-06 57.0 59 35.6
SGA_v2.0_scaffold548G52845 Striga asiatica HOM05D000045 ORTHO05D009940 1.5e-06 57.0 100 34.0
Atru.chr1.1265 Acer truncatum HOM05D000045 ORTHO05D009940 2.0e-06 56.6 50 44.0
FvH4_7g19111 Fragaria vesca HOM05D000593 ORTHO05D002268 2.0e-06 56.6 56 44.6
PSO339G0810 Papaver somniferum HOM05D062982 ORTHO05D009940 2.0e-06 56.6 78 37.2
PSO349G0194 Papaver somniferum HOM05D000045 ORTHO05D000067 2.0e-06 56.6 60 45.0
AUR62038403 Chenopodium quinoa HOM05D008156 ORTHO05D010348 2.6e-06 56.2 71 39.4
AUR62043685 Chenopodium quinoa HOM05D000045 ORTHO05D010348 2.6e-06 56.2 105 30.5
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.4e-06 55.8 85 34.1
Psat4g115040 Pisum sativum HOM05D000045 ORTHO05D009940 3.4e-06 55.8 59 37.3
EL10Ac1g00756 Beta vulgaris HOM05D000045 ORTHO05D000067 4.5e-06 55.5 78 35.9
SGA_v2.0_scaffold50G18569 Striga asiatica HOM05D000045 ORTHO05D000067 4.5e-06 55.5 57 47.4
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.9e-06 55.1 74 39.2
AUR62035986 Chenopodium quinoa HOM05D013828 ORTHO05D013987 5.9e-06 55.1 64 45.3
PSO063G5377 Papaver somniferum HOM05D000045 ORTHO05D000067 5.9e-06 55.1 68 36.8
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.7e-06 54.7 85 32.9
Os11g0681300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 7.7e-06 54.7 65 40.0
vmacro03885 Vaccinium macrocarpon HOM05D011242 ORTHO05D012494 7.7e-06 54.7 77 35.1
AUR62039151 Chenopodium quinoa HOM05D000045 ORTHO05D009940 1.0e-05 54.3 81 37.0
FvH4_6g23211 Fragaria vesca HOM05D000045 ORTHO05D009940 1.0e-05 54.3 56 42.9
TWI09G0748 Tripterygium wilfordii HOM05D000045 ORTHO05D009940 1.0e-05 54.3 46 54.3


User provided reference genes

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