Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19230 Striga asiatica HOM05D000101 ORTHO05D007021 1.6e-132 476.1 235 100.0
SHI24924 Sapria himalayana HOM05D000101 ORTHO05D007021 1.3e-67 260.4 277 49.1
SGA_v2.0_scaffold13G06395 Striga asiatica HOM05D000101 ORTHO05D007021 4.1e-64 248.8 123 98.4
SGA_v2.0_scaffold79G25529 Striga asiatica HOM05D000101 ORTHO05D007021 1.3e-62 243.8 123 95.1
Migut.N02406 Erythranthe guttata HOM05D000101 ORTHO05D007021 4.1e-56 222.2 123 83.7
Oeu041722.1 Olea europaea HOM05D000101 ORTHO05D007021 5.3e-56 221.9 123 82.9
MSTRG.17651 Avicennia marina HOM05D000101 ORTHO05D007021 1.2e-55 220.7 145 73.8
Rhsim13G0204000 Rhododendron simsii HOM05D000101 ORTHO05D007021 1.2e-55 220.7 142 73.9
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 1.3e-54 217.2 123 79.7
Cpa.g.sc9.381 Carica papaya HOM05D000101 ORTHO05D007021 1.7e-54 216.9 123 81.3
FAN23G0853 Fragaria x ananassa HOM05D002590 ORTHO05D002763 1.7e-54 216.9 123 82.1
CANSAT54G0276 Cannabis sativa HOM05D000101 ORTHO05D007021 2.2e-54 216.5 123 79.7
CAN.G65.208 Capsicum annuum HOM05D000101 ORTHO05D007021 2.9e-54 216.1 122 82.0
GSVIVG01037393001 Vitis vinifera HOM05D000101 ORTHO05D007021 2.9e-54 216.1 123 79.7
DCAR_002122 Daucus carota HOM05D000101 ORTHO05D007021 5.0e-54 215.3 123 80.5
SalBow3G0539 Salvia bowleyana HOM05D000101 ORTHO05D007021 5.0e-54 215.3 123 79.7
Dinv29322 Davidia involucrata HOM05D000101 ORTHO05D007021 6.5e-54 214.9 124 79.0
Dinv29324 Davidia involucrata HOM05D000101 ORTHO05D007021 6.5e-54 214.9 124 79.0
CSS0002182 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D007021 8.5e-54 214.5 123 79.7
FvH4_1g18980 Fragaria vesca HOM05D000101 ORTHO05D007021 1.1e-53 214.2 123 80.5
GSVIVG01037400001 Vitis vinifera HOM05D000101 ORTHO05D007021 1.1e-53 214.2 123 78.9
CiPaw.13G147800 Carya illinoinensis HOM05D000101 ORTHO05D007021 1.4e-53 213.8 123 78.0
HanXRQChr10g0307811 Helianthus annuus HOM05D000101 ORTHO05D007021 4.2e-53 212.2 122 79.5
Lalb_Chr06g0173421 Lupinus albus HOM05D000101 ORTHO05D007021 5.5e-53 211.8 123 77.2
RcHm_v2.0_Chr2g0110001 Rosa chinensis HOM05D000101 ORTHO05D007021 5.5e-53 211.8 123 79.7
Glyma.07G235100 Glycine max HOM05D000101 ORTHO05D007021 7.2e-53 211.5 123 78.9
Cc01_g07360 Coffea canephora HOM05D000101 ORTHO05D007021 9.4e-53 211.1 123 79.7
Glyma.20G043800 Glycine max HOM05D000101 ORTHO05D007021 9.4e-53 211.1 123 78.9
Sc06g0003480 Simmondsia chinensis HOM05D000101 ORTHO05D007021 1.2e-52 210.7 123 78.9
VMungo0540G1253 Vigna mungo HOM05D000101 ORTHO05D007021 1.2e-52 210.7 123 78.0
CARHR138950 Cardamine hirsuta HOM05D000101 ORTHO05D007021 1.6e-52 210.3 123 76.4
Eucgr.J00668 Eucalyptus grandis HOM05D000101 ORTHO05D007021 1.6e-52 210.3 164 62.2
FAN28G0419 Fragaria x ananassa HOM05D000101 ORTHO05D007021 1.6e-52 210.3 123 79.7
Lj6g0006302 Lotus japonicus HOM05D000101 ORTHO05D007021 1.6e-52 210.3 124 76.6
Prupe.4G269700 Prunus persica HOM05D000101 ORTHO05D007021 1.6e-52 210.3 123 78.0
Haze_23275 Corylus avellana HOM05D000101 ORTHO05D007021 2.1e-52 209.9 122 80.3
Phvul.006G016500 Phaseolus vulgaris HOM05D000101 ORTHO05D007021 2.1e-52 209.9 123 78.0
TPR.G11957 Trifolium pratense HOM05D000101 ORTHO05D007021 2.1e-52 209.9 123 78.0
Aqoxy2G03523 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 2.7e-52 209.5 142 70.4
PGSC0003DMG400005919 Solanum tuberosum HOM05D000101 ORTHO05D007021 2.7e-52 209.5 140 70.0
TWI79G1559 Tripterygium wilfordii HOM05D000101 ORTHO05D007021 3.6e-52 209.1 148 68.2
Actinidia20391 Actinidia chinensis HOM05D000101 ORTHO05D007021 4.7e-52 208.8 145 68.3
Psat5g198640 Pisum sativum HOM05D000101 ORTHO05D007021 4.7e-52 208.8 123 77.2
Lsat_1_v5_gn_5_88160 Lactuca sativa HOM05D000101 ORTHO05D007021 6.1e-52 208.4 122 77.0
Sp4g25830 Schrenkiella parvula HOM05D000101 ORTHO05D007021 6.1e-52 208.4 123 75.6
Solyc06g073615.1 Solanum lycopersicum HOM05D000101 ORTHO05D007021 6.1e-52 208.4 122 77.0
Sopen06g030030 Solanum pennellii HOM05D000101 ORTHO05D007021 6.1e-52 208.4 122 77.0
Ah.06g194870 Amaranthus hybridus HOM05D000101 ORTHO05D007021 1.0e-51 207.6 123 76.4
AL4G42630 Arabidopsis lyrata HOM05D000101 ORTHO05D007021 1.0e-51 207.6 123 75.6
AT2G43760 Arabidopsis thaliana HOM05D000101 ORTHO05D007021 1.0e-51 207.6 123 75.6
Carub.0004s2629 Capsella rubella HOM05D000101 ORTHO05D007021 1.0e-51 207.6 123 74.8
Ciclev10016806m.g Citrus clementina HOM05D000101 ORTHO05D007021 1.0e-51 207.6 123 77.2
TAR383G0318 Trochodendron aralioides HOM05D000101 ORTHO05D007021 1.0e-51 207.6 123 78.9
Thhalv10001567m.g Eutrema salsugineum HOM05D000101 ORTHO05D007021 1.4e-51 207.2 123 75.6
Glyma.07G235000 Glycine max HOM05D000101 ORTHO05D007021 1.4e-51 207.2 123 76.4
Lj6g0007250 Lotus japonicus HOM05D000101 ORTHO05D007021 1.4e-51 207.2 124 75.8
Peaxi162Scf00526g00083 Petunia axillaris HOM05D000101 ORTHO05D007021 1.8e-51 206.8 122 77.0
Aa31LG1G25480 Aethionema arabicum HOM05D000101 ORTHO05D007021 2.3e-51 206.5 122 75.4
ECA234G3554 Erigeron canadensis HOM05D000101 ORTHO05D007021 2.3e-51 206.5 122 77.9
ClCG02G022620 Citrullus lanatus HOM05D000101 ORTHO05D007021 3.0e-51 206.1 123 76.4
CsaV3_6G038720 Cucumis sativus L. HOM05D000101 ORTHO05D007021 3.0e-51 206.1 123 76.4
Duzib170G0394 Durio zibethinus HOM05D000101 ORTHO05D007021 3.0e-51 206.1 123 76.4
QL01p016256 Quercus lobata HOM05D000101 ORTHO05D007021 3.0e-51 206.1 123 78.0
Thecc.09G252400 Theobroma cacao HOM05D000101 ORTHO05D007021 3.9e-51 205.7 123 76.4
TAR383G0810 Trochodendron aralioides HOM05D000101 ORTHO05D007021 3.9e-51 205.7 123 78.0
Gorai.001G132800 Gossypium raimondii HOM05D000101 ORTHO05D007021 5.1e-51 205.3 123 77.2
Lj2C98T13 Lonicera japonica HOM05D000101 ORTHO05D007021 5.1e-51 205.3 123 74.0
Nitab4.5_0006265g0050 Nicotiana tabacum HOM05D000101 ORTHO05D007021 5.1e-51 205.3 122 76.2
AUR62000226 Chenopodium quinoa HOM05D000101 ORTHO05D007021 6.7e-51 204.9 121 77.7
QL01p016239 Quercus lobata HOM05D000101 ORTHO05D007021 6.7e-51 204.9 123 78.0
Ca_25981_v3 Cicer arietinum L. HOM05D000101 ORTHO05D007021 8.8e-51 204.5 122 77.0
Lj2C4T1 Lonicera japonica HOM05D000101 ORTHO05D007021 8.8e-51 204.5 123 73.2
COL.COLO4_33246 Corchorus olitorius HOM05D000101 ORTHO05D007021 1.1e-50 204.1 123 76.4
Medtr8g036270 Medicago truncatula HOM05D000101 ORTHO05D007021 1.1e-50 204.1 123 74.8
Nitab4.5_0000271g0210 Nicotiana tabacum HOM05D000101 ORTHO05D007021 1.1e-50 204.1 122 75.4
A04p33060 Brassica napus HOM05D000101 ORTHO05D007021 1.5e-50 203.8 123 76.4
A05p03970 Brassica napus HOM05D000101 ORTHO05D007021 1.5e-50 203.8 123 75.6
BraA04t18766Z Brassica rapa HOM05D000101 ORTHO05D007021 1.5e-50 203.8 123 76.4
MELO3C014535.2 Cucumis melo HOM05D000101 ORTHO05D007021 1.5e-50 203.8 123 76.4
Duzib150G0203 Durio zibethinus HOM05D000101 ORTHO05D007021 1.5e-50 203.8 122 75.4
Duzib150G0818 Durio zibethinus HOM05D000101 ORTHO05D007021 1.5e-50 203.8 122 75.4
BcaC02g12365 Brassica carinata HOM05D000101 ORTHO05D007021 2.0e-50 203.4 123 74.8
C04p04720 Brassica napus HOM05D000101 ORTHO05D007021 2.0e-50 203.4 123 74.8
BolC4t22102H Brassica oleracea HOM05D000101 ORTHO05D007021 2.0e-50 203.4 123 74.8
Manes.01G177200 Manihot esculenta HOM05D000101 ORTHO05D007021 2.6e-50 203.0 123 76.4
unitig_22.g6178 Utricularia gibba HOM05D000101 ORTHO05D007021 2.6e-50 203.0 123 75.6
Potri.001G272100 Populus trichocarpa HOM05D000101 ORTHO05D007021 3.3e-50 202.6 123 74.8
EL10Ac4g10078 Beta vulgaris HOM05D000101 ORTHO05D007021 4.4e-50 202.2 123 75.6
Medtr3g041720 Medicago truncatula HOM05D000101 ORTHO05D007021 4.4e-50 202.2 123 74.8
Nn2g10490 Nelumbo nucifera HOM05D000101 ORTHO05D007021 4.4e-50 202.2 122 76.2
Sed0019464 Sechium edule HOM05D000101 ORTHO05D007021 4.4e-50 202.2 123 74.8
Gohir.D08G019100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 5.7e-50 201.8 122 76.2
Gorai.004G013600 Gossypium raimondii HOM05D000101 ORTHO05D007021 5.7e-50 201.8 122 76.2
THA.LOC104808404 Tarenaya hassleriana HOM05D000101 ORTHO05D007021 9.7e-50 201.1 123 73.2
PGR119G0271 Punica granatum HOM05D000101 ORTHO05D007021 1.7e-49 200.3 123 78.0
PSO675G1036 Papaver somniferum HOM05D000101 ORTHO05D007021 2.2e-49 199.9 122 77.9
BraA05t19385Z Brassica rapa HOM05D000101 ORTHO05D007021 2.8e-49 199.5 123 73.2
PSO017G1758 Papaver somniferum HOM05D000101 ORTHO05D007021 2.8e-49 199.5 122 77.0
MBI16_g00843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 6.3e-49 198.4 123 72.4
Gohir.A08G009100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 3.1e-48 196.1 122 73.8
CDE06G1918 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 1.3e-46 190.7 122 70.5
CDE04G1472 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 3.8e-46 189.1 122 70.5
ATR0626G326 Amborella trichopoda HOM05D000101 ORTHO05D007021 1.1e-45 187.6 123 72.4
MBI15_g46843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 1.5e-45 187.2 123 68.3
SEGI_13887 Sequoiadendron giganteum HOM05D000101 ORTHO05D007021 5.5e-45 185.3 123 70.7
HPP92_017376 Vanilla planifolia HOM05D000101 ORTHO05D007021 1.8e-43 180.3 121 66.9
Mapoly0016s0014 Marchantia polymorpha HOM05D000101 ORTHO05D007021 7.5e-42 174.9 123 66.7
SMO119G0082 Selaginella moellendorffii HOM05D000101 ORTHO05D007021 3.1e-40 169.5 123 64.2
AagrBONN_evm.TU.Sc2ySwM_228.724 Anthoceros agrestis HOM05D000101 ORTHO05D007021 7.0e-40 168.3 123 61.8
BcaC02g07150 Brassica carinata HOM05D000101 ORTHO05D007021 2.2e-38 163.3 123 65.0
Gohir.D07G123100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 3.8e-38 162.5 102 73.5
Gohir.A07G118800 Gossypium hirsutum HOM05D000101 ORTHO05D007021 1.5e-37 160.6 101 73.3
Os02g0140300 Oryza sativa ssp. japonica HOM05D000101 ORTHO05D007021 1.9e-37 160.2 121 63.6
Pp3c13_8000 Physcomitrium patens HOM05D000101 ORTHO05D007021 2.5e-37 159.8 130 60.0
Zm00001eb208120 Zea mays HOM05D000101 ORTHO05D007021 4.7e-36 155.6 121 62.0
Lsat_1_v5_gn_5_88140 Lactuca sativa HOM05D000101 ORTHO05D007021 8.0e-36 154.8 111 64.9
Atru.chr5.404 Acer truncatum HOM05D000101 ORTHO05D007021 2.2e-33 146.7 83 80.7
AUR62006572 Chenopodium quinoa HOM05D000101 ORTHO05D007021 3.7e-33 146.0 123 59.3
Aqoxy102s002 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 2.0e-31 140.2 83 77.1
Cre07.g322250 Chlamydomonas reinhardtii HOM05D000101 ORTHO05D007021 5.9e-31 138.7 121 52.9
Atru.chr3.2842 Acer truncatum HOM05D000101 ORTHO05D007021 6.1e-28 128.6 82 72.0
MCO04G049 Micromonas commoda HOM05D000101 ORTHO05D007021 6.1e-28 128.6 116 51.7
Oeu046204.1 Olea europaea HOM05D000101 ORTHO05D007021 9.8e-26 121.3 73 76.7
CBR_g72677 Chara braunii HOM05D000101 ORTHO05D007021 6.3e-25 118.6 122 47.5
PRCOL_00006009 Prasinoderma coloniale HOM05D000101 ORTHO05D007021 5.0e-22 109.0 160 40.6
BcaC01g02229 Brassica carinata HOM05D000101 ORTHO05D007021 1.6e-20 104.0 120 45.8
Sabra16G0167400 Salix brachista HOM05D000101 ORTHO05D007021 8.0e-20 101.7 53 86.8
GSVIVG01027252001 Vitis vinifera HOM05D000101 ORTHO05D007021 4.1e-16 89.4 46 84.8
Cfa024344 Carpinus fangiana HOM05D000101 ORTHO05D007021 5.4e-16 89.0 111 39.6
C03p67630 Brassica napus HOM05D000101 ORTHO05D007021 7.8e-15 85.1 120 40.8
BolSC21t60259H Brassica oleracea HOM05D000101 ORTHO05D007021 7.8e-15 85.1 120 40.8
BcaB02g08903 Brassica carinata HOM05D005622 ORTHO05D002854 5.0e-14 82.4 42 85.7
C04p70760 Brassica napus HOM05D000101 ORTHO05D007021 5.0e-14 82.4 123 40.7
BolC4t28578H Brassica oleracea HOM05D000101 ORTHO05D007021 5.0e-14 82.4 123 40.7
BcaB02g08904 Brassica carinata HOM05D005622 ORTHO05D002854 1.7e-09 67.4 40 75.0
Os02g0517366 Oryza sativa ssp. japonica HOM05D000101 ORTHO05D007021 2.4e-08 63.5 55 52.7


User provided reference genes

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