Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 1.7e-196 689.5 454 100.0
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 2.0e-107 393.7 424 59.7
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 2.5e-62 243.8 411 45.7
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 6.2e-61 239.2 258 56.6
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 1.1e-46 191.8 303 43.2
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 4.3e-46 189.9 434 37.3
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.2e-43 181.8 291 41.9
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 4.9e-42 176.4 418 35.9
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 8.4e-42 175.6 315 38.7
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 8.4e-42 175.6 317 39.7
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 2.5e-41 174.1 224 49.1
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 5.5e-41 172.9 300 41.0
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 2.7e-40 170.6 283 39.6
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 3.5e-40 170.2 264 43.9
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 3.5e-40 170.2 279 40.5
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 7.9e-40 169.1 282 40.4
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.0e-39 168.7 285 41.4
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 1.0e-39 168.7 318 37.4
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 3.9e-39 166.8 275 41.8
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 6.7e-39 166.0 266 44.7
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 1.5e-38 164.9 271 41.3
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 2.5e-38 164.1 270 42.2
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 2.5e-38 164.1 260 44.2
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 7.4e-38 162.5 303 39.3
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 7.4e-38 162.5 265 41.1
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 9.7e-38 162.2 272 41.2
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 2.2e-37 161.0 263 41.4
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 2.2e-37 161.0 244 41.8
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 8.2e-37 159.1 312 37.5
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 2.4e-36 157.5 307 36.5
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 3.1e-36 157.1 302 38.7
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 9.0e-36 155.6 315 39.0
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.2e-35 155.2 277 40.4
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.5e-35 154.8 256 41.0
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 4.5e-35 153.3 256 41.0
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 5.9e-35 152.9 312 37.5
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.3e-34 151.8 275 40.7
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 1.7e-34 151.4 243 40.7
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 5.0e-34 149.8 262 40.1
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 5.0e-34 149.8 262 40.1
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 8.5e-34 149.1 300 37.0
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 1.4e-33 148.3 257 39.7
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 1.4e-33 148.3 263 40.3
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 1.9e-33 147.9 286 39.2
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 2.5e-33 147.5 287 38.7
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 5.5e-33 146.4 276 41.7
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 1.2e-32 145.2 303 36.6
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 1.6e-32 144.8 308 37.0
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 2.1e-32 144.4 255 40.0
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 2.7e-32 144.1 256 41.0
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 2.3e-31 141.0 303 35.6
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 2.3e-31 141.0 293 35.8
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 1.1e-30 138.7 179 48.0
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 4.3e-30 136.7 261 38.3
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 5.7e-30 136.3 267 40.4
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 1.7e-29 134.8 269 36.8
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 4.8e-29 133.3 260 40.8
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 1.1e-28 132.1 325 34.2
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 1.1e-28 132.1 262 38.2
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 2.4e-28 131.0 293 35.5
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 3.1e-28 130.6 168 49.4
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 5.3e-28 129.8 281 38.8
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 9.1e-28 129.0 255 38.0
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 9.1e-28 129.0 296 33.1
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 2.6e-27 127.5 292 34.9
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 3.4e-27 127.1 222 40.1
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 4.5e-27 126.7 308 35.7
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 5.9e-27 126.3 319 33.9
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 1.0e-26 125.6 249 38.6
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 1.0e-26 125.6 309 37.2
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 1.3e-26 125.2 201 44.8
SalBow2G0426 Salvia bowleyana HOM05D005710 ORTHO05D004657 2.2e-26 124.4 138 50.7
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 5.0e-26 123.2 238 38.2
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 8.5e-26 122.5 258 36.0
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 3.2e-25 120.6 304 34.2
SalBow3G1747 Salvia bowleyana HOM05D005710 ORTHO05D004657 4.2e-25 120.2 159 44.7
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 7.2e-25 119.4 107 57.9
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 9.4e-25 119.0 184 43.5
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 9.4e-25 119.0 238 36.1
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 1.6e-24 118.2 243 40.7
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.6e-24 118.2 280 34.3
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 2.7e-24 117.5 288 33.7
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 6.1e-24 116.3 294 32.3
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 7.9e-24 115.9 264 35.6
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 3.9e-23 113.6 262 36.3
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 6.7e-23 112.8 272 34.6
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 8.8e-23 112.5 295 33.2
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 8.8e-23 112.5 295 33.2
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 7.4e-22 109.4 287 34.5
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 7.4e-22 109.4 287 34.5
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 1.3e-21 108.6 300 32.7
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 8.2e-21 105.9 280 33.2
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 8.2e-21 105.9 280 33.2
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 1.1e-20 105.5 227 35.2
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 1.1e-20 105.5 282 34.0
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 5.3e-20 103.2 284 33.1
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 5.3e-20 103.2 251 33.5
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 9.1e-20 102.4 273 30.8
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 9.1e-20 102.4 304 32.6
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 1.2e-19 102.1 234 35.5
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 1.7e-18 98.2 273 33.0
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 3.8e-18 97.1 311 31.2
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 1.1e-17 95.5 279 32.3
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 1.4e-17 95.1 305 31.5
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 1.4e-17 95.1 115 47.8
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 4.2e-17 93.6 149 39.6
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 4.2e-17 93.6 149 39.6
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 4.2e-17 93.6 133 39.8
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 5.5e-17 93.2 100 50.0
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 4.7e-16 90.1 319 31.7
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 1.8e-15 88.2 228 35.1
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 1.8e-15 88.2 149 38.3
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 4.8e-13 80.1 258 29.1
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 1.1e-12 79.0 277 29.2
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 3.8e-10 70.5 88 50.0
Oeu033388.1 Olea europaea HOM05D005710 ORTHO05D004657 8.5e-10 69.3 165 32.7
BcaC06g33686 Brassica carinata HOM05D005710 ORTHO05D004657 1.2e-06 58.9 166 33.1
Potri.002G166300 Populus trichocarpa HOM05D006269 ORTHO05D001487 4.4e-06 57.0 113 33.6
GSVIVG01011503001 Vitis vinifera HOM05D005710 ORTHO05D004657 4.4e-06 57.0 77 42.9
FAN01G3063 Fragaria x ananassa HOM05D005186 ORTHO05D006278 7.5e-06 56.2 99 36.4
AL4G45510 Arabidopsis lyrata HOM05D006269 ORTHO05D001487 9.7e-06 55.8 101 34.7
Thhalv10001302m.g Eutrema salsugineum HOM05D006269 ORTHO05D001487 9.7e-06 55.8 101 33.7


User provided reference genes

Program Settings