Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-207 724.9 357 100.0
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-98 361.7 292 65.4
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-73 281.2 233 63.9
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-67 258.8 237 54.9
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 7.1e-60 235.3 277 48.7
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-57 227.6 342 40.4
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-57 226.9 337 42.4
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-56 222.2 288 41.7
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-55 219.9 309 38.8
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-55 219.9 280 42.1
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-53 211.8 399 33.1
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 9.2e-52 208.4 240 46.2
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-51 206.1 391 32.7
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-49 199.1 348 34.2
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 1.0e-42 178.3 247 44.5
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-38 164.1 91 81.3
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-37 160.6 218 37.6
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 8.7e-34 148.7 298 35.2
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-32 142.5 216 35.6
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-28 129.8 125 52.0
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-25 120.9 267 31.5
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-25 120.2 174 40.2
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-22 111.3 184 35.9
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-21 107.5 295 25.8
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 3.8e-21 106.7 125 41.6
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-21 105.9 184 34.8
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-20 104.8 335 24.5
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-20 104.4 115 45.2
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 5.5e-20 102.8 402 22.1
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 9.3e-20 102.1 89 47.2
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-19 101.3 89 49.4
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-19 100.9 115 44.3
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-18 97.1 90 45.6
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 1.9e-17 94.4 88 43.2
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 3.3e-17 93.6 241 29.0
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 5.7e-17 92.8 89 44.9
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.3e-16 91.7 283 25.8
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 4.8e-16 89.7 254 29.9
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 6.3e-16 89.4 88 47.7
SGA_v2.0_scaffold24G10399 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-15 88.6 85 47.1
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-15 86.3 259 27.8
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-14 85.1 89 43.8
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-14 84.3 88 44.3
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-14 84.0 210 27.6
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 4.5e-14 83.2 295 26.1
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-13 81.6 240 22.9
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 1.7e-13 81.3 88 37.5
SGA_v2.0_scaffold54G19565 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-13 81.3 219 30.6
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-12 77.4 91 41.8
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-12 77.4 86 43.0
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 5.5e-12 76.3 88 37.5
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 9.3e-12 75.5 68 42.6
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-11 73.9 80 43.8
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-11 72.4 64 42.2
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-09 68.6 237 27.0
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-09 68.2 229 28.8
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 3.7e-08 63.5 93 28.0
SGA_v2.0_scaffold89G27407 Striga asiatica HOM05D006612 ORTHO05D009014 6.3e-08 62.8 51 56.9
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-07 62.0 89 33.7
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-07 60.5 120 32.5
Cc00_g35160 Coffea canephora HOM05D006612 ORTHO05D009014 4.1e-07 60.1 89 32.6
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 4.1e-07 60.1 221 25.8
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-06 58.5 211 23.2
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-06 57.0 209 23.4
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 4.5e-06 56.6 88 33.0
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 4.5e-06 56.6 85 31.8
CiPaw.15G116600 Carya illinoinensis HOM05D000096 ORTHO05D010384 7.7e-06 55.8 87 33.3


User provided reference genes

Program Settings