Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 5.0e-96 354.4 171 100.0
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 3.3e-55 218.8 122 85.2
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 3.4e-52 208.8 141 72.3
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 7.6e-28 127.9 70 90.0
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 1.9e-23 113.2 126 50.0
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 2.8e-22 109.4 125 49.6
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 6.2e-22 108.2 125 48.0
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 5.3e-21 105.1 125 45.6
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 4.5e-20 102.1 108 47.2
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 5.8e-20 101.7 108 47.2
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 5.8e-20 101.7 127 48.0
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.3e-19 100.5 108 48.1
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 2.2e-19 99.8 127 48.0
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 2.9e-19 99.4 125 44.8
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 3.8e-19 99.0 113 47.8
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 4.9e-19 98.6 104 51.0
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 8.4e-19 97.8 111 48.6
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 8.4e-19 97.8 124 46.8
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 1.4e-18 97.1 126 46.8
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 4.2e-18 95.5 108 47.2
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 5.5e-18 95.1 114 43.9
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 5.5e-18 95.1 126 43.7
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 1.2e-17 94.0 125 43.2
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 1.6e-17 93.6 125 44.0
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 4.6e-17 92.0 126 46.0
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 6.0e-17 91.7 123 43.9
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 6.0e-17 91.7 108 46.3
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 6.0e-17 91.7 107 47.7
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 7.9e-17 91.3 124 46.0
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 1.0e-16 90.9 119 42.9
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 1.3e-16 90.5 125 41.6
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 1.3e-16 90.5 125 42.4
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 2.3e-16 89.7 108 46.3
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.0e-16 89.4 111 45.0
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 3.9e-16 89.0 111 45.0
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 3.9e-16 89.0 108 46.3
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 5.1e-16 88.6 108 43.5
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 5.1e-16 88.6 109 42.2
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 5.1e-16 88.6 107 44.9
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 5.1e-16 88.6 108 44.4
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 5.1e-16 88.6 108 45.4
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 6.7e-16 88.2 125 42.4
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 1.1e-15 87.4 83 51.8
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 1.5e-15 87.0 104 46.2
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 1.5e-15 87.0 114 44.7
Psat1g075440 Pisum sativum HOM05D007272 ORTHO05D009305 4.3e-15 85.5 111 44.1
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 4.3e-15 85.5 127 43.3
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 5.7e-15 85.1 107 43.9
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 7.4e-15 84.7 114 43.9
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 9.6e-15 84.3 110 40.0
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 1.3e-14 84.0 107 45.8
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.6e-14 83.6 113 40.7
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 2.1e-14 83.2 114 43.0
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 2.8e-14 82.8 107 43.9
HanXRQChr14g0449311 Helianthus annuus HOM05D007272 ORTHO05D009305 2.8e-14 82.8 125 41.6
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 3.7e-14 82.4 107 43.0
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 3.7e-14 82.4 126 40.5
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 3.7e-14 82.4 125 44.8
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 4.8e-14 82.0 106 43.4
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 8.2e-14 81.3 118 38.1
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 1.1e-13 80.9 128 39.1
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 6.9e-13 78.2 131 37.4
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 6.9e-13 78.2 113 41.6
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.5e-12 77.0 125 40.0
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 4.5e-12 75.5 106 37.7
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 7.6e-12 74.7 115 44.3
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 1.0e-11 74.3 115 44.3
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.3e-11 73.9 108 41.7
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 1.7e-11 73.6 110 43.6
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 2.9e-11 72.8 108 40.7
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 3.8e-11 72.4 112 42.0
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 5.0e-11 72.0 86 44.2
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 5.0e-11 72.0 108 39.8
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 6.5e-11 71.6 111 39.6
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 1.9e-10 70.1 82 45.1
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 2.5e-10 69.7 91 40.7
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 3.2e-10 69.3 110 41.8
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 4.2e-10 68.9 82 43.9
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 7.1e-10 68.2 109 39.4
RcHm_v2.0_Chr2g0169041 Rosa chinensis HOM05D007272 ORTHO05D009305 6.1e-09 65.1 126 34.1
FAN02G2692 Fragaria x ananassa HOM05D001960 ORTHO05D004348 7.9e-09 64.7 109 36.7
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 1.0e-08 64.3 87 41.4
MD09G1047900 Malus domestica HOM05D007272 ORTHO05D009305 1.0e-08 64.3 114 38.6
FvH4_6g49170 Fragaria vesca HOM05D007272 ORTHO05D009305 2.3e-08 63.2 109 35.8
FAN14G5197 Fragaria x ananassa HOM05D007272 ORTHO05D009305 3.0e-08 62.8 109 35.8
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 1.1e-07 60.8 108 39.8
Pp3c15_23310 Physcomitrium patens HOM05D007272 ORTHO05D009305 1.9e-07 60.1 103 34.0
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.7e-07 58.5 121 33.9
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 5.7e-07 58.5 121 33.9
SMO356G0594 Selaginella moellendorffii HOM05D007272 ORTHO05D009305 6.3e-06 55.1 62 41.9
Dinv33460 Davidia involucrata HOM05D007272 ORTHO05D010159 8.2e-06 54.7 51 49.0


User provided reference genes

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