Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19145 Striga asiatica HOM05D023076 ORTHO05D011211 1.8e-179 632.5 317 100.0
SGA_v2.0_scaffold44G16592 Striga asiatica HOM05D023076 ORTHO05D011211 3.3e-117 425.6 260 83.5
SGA_v2.0_scaffold112G31672 Striga asiatica HOM05D023076 ORTHO05D011211 2.7e-71 273.1 159 88.1
SGA_v2.0_scaffold4G01951 Striga asiatica HOM05D023076 ORTHO05D011211 4.4e-53 212.6 153 72.5
ECA247G1396 Erigeron canadensis HOM05D009081 ORTHO05D000285 4.7e-31 139.4 258 35.3
TPR.G31033 Trifolium pratense HOM05D000034 ORTHO05D000037 3.0e-30 136.7 280 29.3
ECA236G2545 Erigeron canadensis HOM05D009081 ORTHO05D000285 4.0e-30 136.3 255 31.8
SGA_v2.0_scaffold88G27236 Striga asiatica HOM05D023076 ORTHO05D011211 8.8e-30 135.2 172 44.8
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 2.2e-28 130.6 118 57.6
ECA233G3281 Erigeron canadensis HOM05D000124 ORTHO05D011211 2.4e-27 127.1 254 32.7
Hund25589 Selenicereus undatus HOM05D009081 ORTHO05D011211 1.3e-25 121.3 282 30.5
Hund24601 Selenicereus undatus HOM05D009081 ORTHO05D011211 2.3e-25 120.6 277 31.4
Hund08587 Selenicereus undatus HOM05D009081 ORTHO05D011211 8.6e-25 118.6 279 30.8
Hund08582 Selenicereus undatus HOM05D009081 ORTHO05D011211 3.2e-24 116.7 279 30.5
HanXRQChr02g0051761 Helianthus annuus HOM05D009081 ORTHO05D000285 5.5e-24 115.9 251 29.9
Hund08746 Selenicereus undatus HOM05D009081 ORTHO05D011211 1.8e-22 110.9 279 30.1
Medtr7g105890 Medicago truncatula HOM05D009081 ORTHO05D011211 6.8e-22 109.0 280 27.1
HanXRQChr16g0509561 Helianthus annuus HOM05D000124 ORTHO05D000285 7.5e-21 105.5 269 30.5
ECA233G5516 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.7e-20 104.4 270 29.6
Medtr0693s0050 Medicago truncatula HOM05D000876 ORTHO05D000285 1.7e-20 104.4 130 43.8
ECA246G3140 Erigeron canadensis HOM05D001111 ORTHO05D000939 2.8e-20 103.6 253 29.2
Medtr4g128540 Medicago truncatula HOM05D009081 ORTHO05D011211 9.2e-19 98.6 270 25.9
HanXRQChr16g0514621 Helianthus annuus HOM05D009081 ORTHO05D011211 7.8e-18 95.5 256 28.5
Hund11051 Selenicereus undatus HOM05D009081 ORTHO05D011211 3.8e-17 93.2 258 27.9
AUR62025702 Chenopodium quinoa HOM05D009081 ORTHO05D011211 1.1e-16 91.7 249 24.9
Hund15113 Selenicereus undatus HOM05D009081 ORTHO05D000285 2.8e-15 87.0 242 27.7
Hund25999 Selenicereus undatus HOM05D009081 ORTHO05D011211 3.6e-15 86.7 265 24.2
Medtr4g017485 Medicago truncatula HOM05D009081 ORTHO05D011211 2.3e-14 84.0 210 26.2
Hund23348 Selenicereus undatus HOM05D009081 ORTHO05D011211 3.0e-14 83.6 268 29.5
ECA236G2439 Erigeron canadensis HOM05D000166 ORTHO05D000812 8.9e-14 82.0 154 35.1
Hund22593 Selenicereus undatus HOM05D009081 ORTHO05D011211 1.5e-13 81.3 262 25.6
HanXRQChr16g0514631 Helianthus annuus HOM05D000124 ORTHO05D000056 2.9e-12 77.0 252 26.2
AUR62042520 Chenopodium quinoa HOM05D003046 ORTHO05D003428 3.2e-11 73.6 247 24.7
EL10Ac4g07867 Beta vulgaris HOM05D000876 ORTHO05D000285 1.2e-10 71.6 224 28.1
Hund17797 Selenicereus undatus HOM05D009081 ORTHO05D011211 1.6e-10 71.2 264 27.3
Hund01895 Selenicereus undatus HOM05D009081 ORTHO05D011211 2.7e-10 70.5 244 27.5
ECA234G4025 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.6e-10 69.7 234 26.9
ECA240G4622 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.6e-10 69.7 189 31.7
Hund04972 Selenicereus undatus HOM05D009081 ORTHO05D011211 4.6e-10 69.7 172 31.4
AUR62039525 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.8e-10 68.9 78 47.4
Nitab4.5_0020090g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.0e-09 68.6 258 28.3
HanXRQChr09g0265901 Helianthus annuus HOM05D000876 ORTHO05D000285 1.7e-09 67.8 69 40.6
FvH4_5g23913 Fragaria vesca HOM05D000876 ORTHO05D000285 6.6e-09 65.9 260 25.8
FAN08G3019 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.6e-09 65.9 252 26.2
Hund12276 Selenicereus undatus HOM05D009081 ORTHO05D011211 6.6e-09 65.9 118 33.1
FAN05G4669 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.1e-08 65.1 255 23.9
FvH4_6g39920 Fragaria vesca HOM05D000876 ORTHO05D000285 2.5e-08 63.9 259 24.3
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.5e-08 63.9 256 23.8
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 2.5e-08 63.9 281 25.3
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 3.3e-08 63.5 288 24.3
FvH4_7g08972 Fragaria vesca HOM05D000876 ORTHO05D000285 4.3e-08 63.2 256 24.2
Nitab4.5_0028034g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 7.3e-08 62.4 260 26.5
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 9.5e-08 62.0 256 24.2
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 1.6e-07 61.2 261 23.8
FvH4_7g12221 Fragaria vesca HOM05D000876 ORTHO05D000285 1.6e-07 61.2 256 24.2
FAN05G1224 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.6e-07 61.2 256 23.8
FvH4_4g20923 Fragaria vesca HOM05D000876 ORTHO05D000285 3.6e-07 60.1 80 43.8
FAN22G0137 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.7e-07 59.7 260 24.2
Potri.008G205550 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.7e-07 59.7 83 42.2
Hund22647 Selenicereus undatus HOM05D009081 ORTHO05D000285 4.7e-07 59.7 85 37.6
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 6.2e-07 59.3 77 37.7
EL10Ac2g03248 Beta vulgaris HOM05D000034 ORTHO05D000037 8.0e-07 58.9 113 35.4
Gorai.008G084800 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.0e-07 58.9 75 42.7
Potri.018G054501 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.0e-07 58.9 89 38.2
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 8.0e-07 58.9 281 25.3
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-06 58.5 251 23.1
Potri.008G176600 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-06 58.5 53 47.2
Prupe.8G016500 Prunus persica HOM05D000876 ORTHO05D000285 1.1e-06 58.5 264 23.9
arahy.Tifrunner.gnm1.ann1.Z5ZQ3Q Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-06 58.2 77 37.7
Lj1g0019277 Lotus japonicus HOM05D000876 ORTHO05D000285 1.4e-06 58.2 253 25.3
Nitab4.5_0002356g0010 Nicotiana tabacum HOM05D007579 ORTHO05D000285 1.4e-06 58.2 257 26.5
Potri.010G190650 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.4e-06 58.2 253 26.1
Gorai.006G056900 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.8e-06 57.8 75 41.3
Gorai.012G109800 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.8e-06 57.8 75 41.3
Hund13350 Selenicereus undatus HOM05D009081 ORTHO05D000285 1.8e-06 57.8 74 36.5
Potri.005G135800 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.3e-06 57.4 86 39.5
Potri.010G076000 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.3e-06 57.4 271 25.1
Potri.003G192350 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.1e-06 57.0 86 39.5
Potri.004G230401 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.1e-06 57.0 86 39.5
Potri.006G149001 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.1e-06 57.0 86 39.5
Potri.007G062850 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.1e-06 57.0 86 39.5
Potri.013G144650 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.1e-06 57.0 86 39.5
Potri.014G091925 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.1e-06 57.0 86 39.5
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 4.0e-06 56.6 252 23.4
FAN04G1353 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.0e-06 56.6 77 44.2
Gorai.005G209400 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.0e-06 56.6 75 38.7
Hund23347 Selenicereus undatus HOM05D009081 ORTHO05D011211 4.0e-06 56.6 193 23.3
TWI81G0918 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 4.0e-06 56.6 276 24.3
Gorai.007G271200 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.2e-06 56.2 63 41.3
Gorai.009G359600 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.2e-06 56.2 80 38.8
Potri.017G062600 Populus trichocarpa HOM05D000876 ORTHO05D000285 5.2e-06 56.2 53 45.3
TWI15G1148 Tripterygium wilfordii HOM05D013465 ORTHO05D000285 5.2e-06 56.2 68 38.2
TWI36G1398 Tripterygium wilfordii HOM05D000876 ORTHO05D000285 5.2e-06 56.2 276 23.9
FAN15G0148 Fragaria x ananassa HOM05D000876 ORTHO05D000285 6.8e-06 55.8 104 36.5
Gohir.D08G116700 Gossypium hirsutum HOM05D000876 ORTHO05D000285 6.8e-06 55.8 53 45.3
Gorai.004G157500 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.8e-06 55.8 75 40.0
Gorai.005G210400 Gossypium raimondii HOM05D000876 ORTHO05D000285 6.8e-06 55.8 106 35.8
Potri.001G299100 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.8e-06 55.8 260 26.2
Potri.011G125150 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.8e-06 55.8 86 37.2
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 8.9e-06 55.5 252 23.8
Gorai.N004200 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.9e-06 55.5 75 38.7
Potri.017G072700 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.9e-06 55.5 53 43.4


User provided reference genes

Program Settings