Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 6.2e-67 257.3 127 100.0
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 7.8e-62 240.4 127 91.3
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 6.0e-54 214.2 127 78.7
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 7.8e-54 213.8 127 78.0
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 3.9e-53 211.5 127 79.5
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 8.7e-53 210.3 127 78.0
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 8.7e-53 210.3 127 78.7
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.5e-52 209.5 127 78.0
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.9e-52 209.1 127 79.5
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 3.3e-52 208.4 121 81.8
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 4.7e-51 204.5 122 81.1
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 9.0e-50 200.3 124 75.8
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 1.2e-49 199.9 124 76.6
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 1.5e-49 199.5 125 76.8
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 2.6e-49 198.7 127 71.7
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 2.6e-49 198.7 122 76.2
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 7.6e-49 197.2 124 75.8
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 7.6e-49 197.2 124 75.8
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 7.6e-49 197.2 124 75.8
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 7.6e-49 197.2 123 78.0
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 9.9e-49 196.8 126 75.4
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.7e-48 196.1 124 75.0
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 1.7e-48 196.1 125 77.6
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 2.2e-48 195.7 127 71.7
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 2.9e-48 195.3 126 73.8
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.9e-48 195.3 127 70.9
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 4.9e-48 194.5 127 74.0
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.9e-48 194.5 124 74.2
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 4.9e-48 194.5 124 74.2
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.1e-47 193.4 128 71.9
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 1.4e-47 193.0 127 74.0
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 2.4e-47 192.2 127 73.2
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 1.2e-46 189.9 127 74.8
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.2e-46 189.9 124 70.2
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.6e-46 189.5 124 72.6
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 1.6e-46 189.5 127 74.0
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 6.0e-46 187.6 122 71.3
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 6.0e-46 187.6 124 70.2
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 1.0e-45 186.8 127 73.2
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 2.3e-45 185.7 128 72.7
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 3.0e-45 185.3 125 74.4
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 3.9e-45 184.9 127 72.4
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 6.6e-45 184.1 124 71.0
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 6.6e-45 184.1 125 71.2
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 6.6e-45 184.1 123 70.7
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 1.1e-44 183.3 125 71.2
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.5e-44 183.0 125 70.4
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 3.3e-44 181.8 125 71.2
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 5.6e-44 181.0 127 66.9
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 1.3e-43 179.9 129 69.0
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 2.1e-43 179.1 120 73.3
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 3.6e-43 178.3 128 69.5
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.6e-43 178.3 127 66.9
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 4.8e-43 177.9 125 69.6
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 4.8e-43 177.9 125 69.6
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 4.8e-43 177.9 123 68.3
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 6.2e-43 177.6 125 68.8
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 6.2e-43 177.6 125 68.8
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 6.2e-43 177.6 125 68.8
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 6.2e-43 177.6 127 66.9
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 6.2e-43 177.6 125 70.4
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 6.2e-43 177.6 124 68.5
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 1.1e-42 176.8 121 67.8
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.1e-42 176.8 125 68.0
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 1.1e-42 176.8 124 71.0
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 1.4e-42 176.4 126 68.3
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 1.4e-42 176.4 125 68.8
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 1.4e-42 176.4 127 70.1
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.1e-42 175.3 124 70.2
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 3.1e-42 175.3 124 67.7
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 3.1e-42 175.3 124 66.1
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 4.0e-42 174.9 125 65.6
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 5.3e-42 174.5 127 66.1
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 9.0e-42 173.7 123 66.7
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.5e-41 172.9 124 69.4
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 2.6e-41 172.2 126 67.5
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 4.5e-41 171.4 126 65.9
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 4.5e-41 171.4 124 66.9
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 5.8e-41 171.0 124 67.7
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 5.8e-41 171.0 122 71.3
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 5.8e-41 171.0 126 66.7
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 7.6e-41 170.6 127 66.9
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 7.6e-41 170.6 125 67.2
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 1.3e-40 169.9 128 64.8
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 1.3e-40 169.9 128 65.6
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 1.3e-40 169.9 124 67.7
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 1.3e-40 169.9 123 65.0
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 1.7e-40 169.5 103 79.6
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 1.7e-40 169.5 127 63.8
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 2.9e-40 168.7 125 65.6
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 2.9e-40 168.7 125 65.6
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 4.9e-40 167.9 124 67.7
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 4.9e-40 167.9 122 65.6
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 6.4e-40 167.5 126 65.9
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 8.4e-40 167.2 130 65.4
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.1e-39 166.8 127 63.0
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 1.9e-39 166.0 126 63.5
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 2.4e-39 165.6 126 65.9
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 4.2e-39 164.9 124 65.3
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 4.2e-39 164.9 127 63.0
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 4.2e-39 164.9 127 65.4
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 5.4e-39 164.5 122 63.1
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 7.1e-39 164.1 121 66.9
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 7.1e-39 164.1 124 66.9
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 7.1e-39 164.1 128 64.8
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 2.1e-38 162.5 122 66.4
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 3.9e-37 158.3 129 61.2
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 3.9e-37 158.3 126 63.5
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.6e-36 154.5 127 61.4
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 9.6e-36 153.7 126 62.7
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 1.6e-35 152.9 124 60.5
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 3.1e-34 148.7 127 59.1
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 9.9e-33 143.7 127 58.3
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 5.1e-29 131.3 127 54.3
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 1.5e-28 129.8 97 63.9
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 2.5e-28 129.0 81 74.1
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 5.6e-28 127.9 80 73.8
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 2.8e-27 125.6 115 55.7
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 4.0e-26 121.7 97 60.8
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 5.3e-26 121.3 115 56.5
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.6e-25 119.0 75 73.3
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 9.3e-23 110.5 67 76.1
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 5.9e-17 91.3 120 45.0
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.7e-16 89.7 66 63.6
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 2.9e-16 89.0 134 38.8
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 8.5e-16 87.4 72 61.1
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.4e-15 86.7 76 57.9
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 5.5e-15 84.7 69 56.5
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 2.1e-14 82.8 76 46.1
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 3.6e-14 82.0 123 38.2
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 3.9e-13 78.6 124 41.1
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 1.5e-12 76.6 103 43.7
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 7.4e-12 74.3 127 36.2
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 4.8e-11 71.6 132 34.1
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 1.8e-10 69.7 99 36.4
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 3.1e-10 68.9 114 40.4
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 2.6e-09 65.9 49 69.4
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 5.0e-08 61.6 79 39.2
Sopen02g033680 Solanum pennellii HOM05D005465 ORTHO05D006612 6.1e-06 54.7 38 68.4


User provided reference genes

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