Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19113 Striga asiatica HOM05D000990 ORTHO05D000810 1.7e-85 319.7 217 100.0
Cc07_g04490 Coffea canephora HOM05D000990 ORTHO05D000810 4.2e-15 85.9 39 87.2
Solyc02g089240.3 Solanum lycopersicum HOM05D000990 ORTHO05D000810 5.5e-15 85.5 39 82.1
Sopen02g034030 Solanum pennellii HOM05D000990 ORTHO05D000810 5.5e-15 85.5 39 82.1
SGA_v2.0_scaffold4G02356 Striga asiatica HOM05D000990 ORTHO05D000810 5.5e-15 85.5 39 84.6
Actinidia18080 Actinidia chinensis HOM05D000990 ORTHO05D000810 6.1e-14 82.0 39 76.9
Lsat_1_v5_gn_2_90220 Lactuca sativa HOM05D000990 ORTHO05D000810 6.1e-14 82.0 39 79.5
Oeu033410.1 Olea europaea HOM05D000990 ORTHO05D000810 1.8e-13 80.5 39 76.9
Lj4A123G18 Lonicera japonica HOM05D000990 ORTHO05D000810 2.3e-13 80.1 39 74.4
Hma1.2p1_0656F.1_g196800 Hydrangea macrophylla HOM05D000990 ORTHO05D000810 3.0e-13 79.7 39 74.4
Peaxi162Scf00020g02340 Petunia axillaris HOM05D000990 ORTHO05D000810 3.0e-13 79.7 107 41.1
Migut.H00585 Erythranthe guttata HOM05D000990 ORTHO05D000810 3.9e-13 79.3 39 76.9
Nitab4.5_0001339g0080 Nicotiana tabacum HOM05D000990 ORTHO05D000810 8.8e-13 78.2 40 72.5
Rhsim10G0056500 Rhododendron simsii HOM05D000990 ORTHO05D000810 8.8e-13 78.2 39 74.4
Nitab4.5_0010228g0010 Nicotiana tabacum HOM05D000990 ORTHO05D000810 1.1e-12 77.8 39 74.4
Peaxi162Scf01197g00005 Petunia axillaris HOM05D000990 ORTHO05D000810 1.1e-12 77.8 39 76.9
Actinidia17604 Actinidia chinensis HOM05D000990 ORTHO05D000810 2.6e-12 76.6 53 50.9
Dinv33863 Davidia involucrata HOM05D000990 ORTHO05D000810 3.3e-12 76.3 39 69.2
Lju361A6G24 Lonicera japonica HOM05D000990 ORTHO05D000810 3.3e-12 76.3 39 74.4
Hma1.2p1_0474F.1_g160760 Hydrangea macrophylla HOM05D000990 ORTHO05D000810 4.4e-12 75.9 39 74.4
Migut.O00381 Erythranthe guttata HOM05D000990 ORTHO05D000810 5.7e-12 75.5 39 71.8
ECA238G0850 Erigeron canadensis HOM05D000990 ORTHO05D000810 7.4e-12 75.1 39 74.4
Nitab4.5_0001434g0100 Nicotiana tabacum HOM05D000990 ORTHO05D000810 9.7e-12 74.7 39 71.8
Solyc02g065720.3 Solanum lycopersicum HOM05D000990 ORTHO05D000810 9.7e-12 74.7 39 74.4
Sopen02g015940 Solanum pennellii HOM05D000990 ORTHO05D000810 9.7e-12 74.7 39 74.4
SalBow1G0312 Salvia bowleyana HOM05D000990 ORTHO05D000810 1.3e-11 74.3 39 69.2
MSTRG.2974 Avicennia marina HOM05D000990 ORTHO05D000810 1.7e-11 73.9 39 69.2
Nitab4.5_0001541g0040 Nicotiana tabacum HOM05D000990 ORTHO05D000810 1.7e-11 73.9 39 71.8
Nitab4.5_0000154g0170 Nicotiana tabacum HOM05D000990 ORTHO05D000810 2.2e-11 73.6 39 71.8
Nitab4.5_0002249g0020 Nicotiana tabacum HOM05D000990 ORTHO05D000810 2.2e-11 73.6 39 71.8
CSS0008487 Camellia sinensis var. sinensis HOM05D000990 ORTHO05D000810 2.8e-11 73.2 38 71.1
Oeu049877.1 Olea europaea HOM05D000990 ORTHO05D000810 3.7e-11 72.8 37 78.4
Peaxi162Scf00481g00724 Petunia axillaris HOM05D000990 ORTHO05D000810 3.7e-11 72.8 39 69.2
HanXRQChr14g0452491 Helianthus annuus HOM05D000990 ORTHO05D000810 6.3e-11 72.0 39 66.7
vmacro18127 Vaccinium macrocarpon HOM05D000990 ORTHO05D000810 1.1e-10 71.2 39 69.2
MSTRG.15435 Avicennia marina HOM05D000990 ORTHO05D000810 2.4e-10 70.1 38 68.4
ClCG11G004970 Citrullus lanatus HOM05D000990 ORTHO05D000810 2.4e-10 70.1 69 52.2
DCAR_025454 Daucus carota HOM05D000990 ORTHO05D000810 3.1e-10 69.7 39 69.2
Oeu007081.1 Olea europaea HOM05D000990 ORTHO05D000810 1.2e-09 67.8 39 64.1
Gohir.A07G179700 Gossypium hirsutum HOM05D000990 ORTHO05D000810 2.0e-09 67.0 40 65.0
Manes.01G103500 Manihot esculenta HOM05D000990 ORTHO05D000810 2.0e-09 67.0 40 67.5
Rhsim08G0077300 Rhododendron simsii HOM05D000990 ORTHO05D000810 2.0e-09 67.0 40 57.5
Duzib138G0871 Durio zibethinus HOM05D000990 ORTHO05D000810 2.6e-09 66.6 40 65.0
Gohir.A07G169850 Gossypium hirsutum HOM05D000990 ORTHO05D000810 2.6e-09 66.6 40 62.5
Gohir.D07G176100 Gossypium hirsutum HOM05D000990 ORTHO05D000810 2.6e-09 66.6 40 62.5
Gorai.001G197000 Gossypium raimondii HOM05D000990 ORTHO05D000810 2.6e-09 66.6 40 62.5
Gorai.001G207100 Gossypium raimondii HOM05D000990 ORTHO05D000810 2.6e-09 66.6 40 67.5
unitig_62.g23393 Utricularia gibba HOM05D000990 ORTHO05D000810 2.6e-09 66.6 39 61.5
Thecc.04G106300 Theobroma cacao HOM05D000990 ORTHO05D000810 3.4e-09 66.2 40 65.0
CANSAT64G2486 Cannabis sativa HOM05D000990 ORTHO05D000810 4.5e-09 65.9 40 65.0
SGA_v2.0_scaffold154G37127 Striga asiatica HOM05D000990 ORTHO05D000810 4.5e-09 65.9 38 63.2
Potri.004G114800 Populus trichocarpa HOM05D000990 ORTHO05D000810 1.0e-08 64.7 40 65.0
Atru.chr8.647 Acer truncatum HOM05D000990 ORTHO05D000810 1.3e-08 64.3 40 62.5
GSVIVG01036545001 Vitis vinifera HOM05D000990 ORTHO05D000810 1.3e-08 64.3 40 60.0
Gohir.D07G186500 Gossypium hirsutum HOM05D000990 ORTHO05D000810 1.7e-08 63.9 40 62.5
MD09G1074400 Malus domestica HOM05D000990 ORTHO05D000810 1.7e-08 63.9 40 62.5
Nn3g17521 Nelumbo nucifera HOM05D000990 ORTHO05D000810 1.7e-08 63.9 39 61.5
Prupe.3G248900 Prunus persica HOM05D000990 ORTHO05D000810 1.7e-08 63.9 40 65.0
Sc11g0008810 Simmondsia chinensis HOM05D000990 ORTHO05D000810 1.7e-08 63.9 40 62.5
CiPaw.03G082900 Carya illinoinensis HOM05D000990 ORTHO05D000810 2.2e-08 63.5 40 67.5
Duzib133G0861 Durio zibethinus HOM05D000990 ORTHO05D000810 2.2e-08 63.5 40 62.5
Glyma.18G274000 Glycine max HOM05D000990 ORTHO05D000810 2.2e-08 63.5 40 65.0
arahy.Tifrunner.gnm1.ann1.A3SJ0D Arachis hypogaea HOM05D000990 ORTHO05D000810 2.9e-08 63.2 40 65.0
arahy.Tifrunner.gnm1.ann1.S2V195 Arachis hypogaea HOM05D000990 ORTHO05D000810 2.9e-08 63.2 40 65.0
Ciclev10012668m.g Citrus clementina HOM05D000990 ORTHO05D000810 2.9e-08 63.2 40 65.0
Lalb_Chr02g0158791 Lupinus albus HOM05D000990 ORTHO05D000810 2.9e-08 63.2 38 68.4
Oeu031838.1 Olea europaea HOM05D000990 ORTHO05D000810 2.9e-08 63.2 39 61.5
Potri.017G100100 Populus trichocarpa HOM05D000990 ORTHO05D000810 2.9e-08 63.2 40 62.5
Glyma.08G251300 Glycine max HOM05D000990 ORTHO05D000810 3.8e-08 62.8 38 65.8
Lalb_Chr06g0174871 Lupinus albus HOM05D000990 ORTHO05D000810 3.8e-08 62.8 40 67.5
MELO3C022050.2 Cucumis melo HOM05D000990 ORTHO05D000810 5.0e-08 62.4 39 66.7
CsaV3_5G038700 Cucumis sativus L. HOM05D000990 ORTHO05D000810 5.0e-08 62.4 39 66.7
TWI60G0607 Tripterygium wilfordii HOM05D000990 ORTHO05D000810 5.0e-08 62.4 40 62.5
Phvul.008G027500 Phaseolus vulgaris HOM05D000990 ORTHO05D000810 8.5e-08 61.6 38 65.8
Sed0020163 Sechium edule HOM05D000990 ORTHO05D000810 8.5e-08 61.6 39 64.1
MD17G1065800 Malus domestica HOM05D000990 ORTHO05D000810 1.1e-07 61.2 40 62.5
Sabra17G0086300 Salix brachista HOM05D000990 ORTHO05D000810 1.1e-07 61.2 41 61.0
SGA_v2.0_scaffold52G19084 Striga asiatica HOM05D016586 ORTHO05D400185 1.1e-07 61.2 35 97.1
SGA_v2.0_scaffold52G19088 Striga asiatica HOM05D016586 ORTHO05D406419 1.1e-07 61.2 35 97.1
Haze_14381 Corylus avellana HOM05D000990 ORTHO05D000810 1.4e-07 60.8 40 62.5
Gohir.A07G079000 Gossypium hirsutum HOM05D000990 ORTHO05D000810 1.4e-07 60.8 40 60.0
TPR.G15961 Trifolium pratense HOM05D000990 ORTHO05D000810 1.4e-07 60.8 40 60.0
EL10Ac2g04441 Beta vulgaris HOM05D000990 ORTHO05D000810 1.9e-07 60.5 40 60.0
Cfa007696 Carpinus fangiana HOM05D000990 ORTHO05D000810 1.9e-07 60.5 40 62.5
AUR62023159 Chenopodium quinoa HOM05D000990 ORTHO05D000810 1.9e-07 60.5 40 62.5
Glyma.13G052000 Glycine max HOM05D000990 ORTHO05D000810 1.9e-07 60.5 38 65.8
Glyma.19G034700 Glycine max HOM05D000990 ORTHO05D000810 1.9e-07 60.5 38 65.8
Gorai.001G089900 Gossypium raimondii HOM05D000990 ORTHO05D000810 1.9e-07 60.5 40 60.0
AUR62009480 Chenopodium quinoa HOM05D000990 ORTHO05D000810 2.5e-07 60.1 40 60.0
Sabra04G0071300 Salix brachista HOM05D000990 ORTHO05D000810 2.5e-07 60.1 40 60.0
TAR371G1116 Trochodendron aralioides HOM05D000990 ORTHO05D000810 2.5e-07 60.1 39 59.0
Sed0014999 Sechium edule HOM05D000990 ORTHO05D007330 3.2e-07 59.7 39 64.1
Ah.10g038180 Amaranthus hybridus HOM05D000990 ORTHO05D000810 4.2e-07 59.3 40 57.5
Lj2g0021976 Lotus japonicus HOM05D000990 ORTHO05D000810 4.2e-07 59.3 40 62.5
Medtr6g015980 Medicago truncatula HOM05D000990 ORTHO05D000810 4.2e-07 59.3 40 60.0
VMungo1383G0893 Vigna mungo HOM05D000990 ORTHO05D000810 4.2e-07 59.3 38 63.2
PGR004G0479 Punica granatum HOM05D000990 ORTHO05D000810 5.5e-07 58.9 40 57.5
VMungo1383G0376 Vigna mungo HOM05D000990 ORTHO05D000810 5.5e-07 58.9 38 63.2
Phvul.008G026500 Phaseolus vulgaris HOM05D000990 ORTHO05D000810 7.2e-07 58.5 38 63.2
TAR629G0419 Trochodendron aralioides HOM05D000990 ORTHO05D000810 9.4e-07 58.2 38 63.2
QL02p065865 Quercus lobata HOM05D000990 ORTHO05D000810 1.2e-06 57.8 40 55.0
Sc10g0000590 Simmondsia chinensis HOM05D000990 ORTHO05D000810 1.6e-06 57.4 37 62.2
Gohir.D07G084300 Gossypium hirsutum HOM05D000990 ORTHO05D000810 2.7e-06 56.6 40 57.5
RcHm_v2.0_Chr2g0164901 Rosa chinensis HOM05D000990 ORTHO05D000810 2.7e-06 56.6 40 57.5
MBI19_g04939_MAGBIO Magnolia biondii HOM05D000990 ORTHO05D000810 3.6e-06 56.2 38 52.6
Oeu062181.2 Olea europaea HOM05D000990 ORTHO05D000810 6.1e-06 55.5 39 53.8
TWI32G0202 Tripterygium wilfordii HOM05D000990 ORTHO05D000810 6.1e-06 55.5 40 55.0
TWI34G1806 Tripterygium wilfordii HOM05D000990 ORTHO05D000810 6.1e-06 55.5 39 56.4
Lalb_Chr10g0092721 Lupinus albus HOM05D000990 ORTHO05D000810 7.9e-06 55.1 40 57.5


User provided reference genes

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