Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19089 Striga asiatica HOM05D000147 ORTHO05D406533 3.2e-107 391.7 191 100.0
SGA_v2.0_scaffold7G04135 Striga asiatica HOM05D000147 ORTHO05D406079 1.5e-64 250.0 191 68.6
Migut.D01932 Erythranthe guttata HOM05D000147 ORTHO05D005311 9.4e-19 97.8 184 37.5
MSTRG.11456 Avicennia marina HOM05D000147 ORTHO05D005311 5.0e-12 75.5 188 32.4
Psat7g173240 Pisum sativum HOM05D000147 ORTHO05D005311 8.5e-12 74.7 198 28.8
Carub.0003s1961 Capsella rubella HOM05D000147 ORTHO05D005311 1.9e-11 73.6 188 33.5
Lsat_1_v5_gn_2_97540 Lactuca sativa HOM05D000147 ORTHO05D005311 4.2e-11 72.4 180 31.7
MSTRG.23131 Avicennia marina HOM05D000147 ORTHO05D005311 5.5e-11 72.0 189 31.7
Gohir.D12G137800 Gossypium hirsutum HOM05D000147 ORTHO05D005311 5.5e-11 72.0 195 31.8
AL3G33200 Arabidopsis lyrata HOM05D000147 ORTHO05D005311 7.2e-11 71.6 188 33.0
unitig_26.g9622 Utricularia gibba HOM05D000147 ORTHO05D005311 7.2e-11 71.6 194 29.9
Medtr4g074920 Medicago truncatula HOM05D000147 ORTHO05D005311 9.4e-11 71.2 195 29.2
AUR62032985 Chenopodium quinoa HOM05D000147 ORTHO05D005311 2.1e-10 70.1 183 32.8
Migut.I00007 Erythranthe guttata HOM05D000147 ORTHO05D005311 2.1e-10 70.1 210 29.0
AT3G19740 Arabidopsis thaliana HOM05D000147 ORTHO05D005311 4.7e-10 68.9 188 31.9
EL10Ac9g22954 Beta vulgaris HOM05D000147 ORTHO05D005311 4.7e-10 68.9 183 31.7
Ca_19029_v3 Cicer arietinum L. HOM05D000147 ORTHO05D005311 4.7e-10 68.9 198 29.3
Gohir.A12G134200 Gossypium hirsutum HOM05D000147 ORTHO05D005311 4.7e-10 68.9 195 30.8
CARHR095260 Cardamine hirsuta HOM05D000147 ORTHO05D005311 6.1e-10 68.6 193 31.1
Sopen02g003380 Solanum pennellii HOM05D000147 ORTHO05D005311 6.1e-10 68.6 196 30.6
THA.LOC104826507 Tarenaya hassleriana HOM05D000147 ORTHO05D005311 6.1e-10 68.6 215 28.4
Atru.chr11.1175 Acer truncatum HOM05D000147 ORTHO05D005311 8.0e-10 68.2 185 31.4
CANSAT64G1147 Cannabis sativa HOM05D000147 ORTHO05D005311 8.0e-10 68.2 217 29.5
Sed0010099 Sechium edule HOM05D000147 ORTHO05D005311 8.0e-10 68.2 190 30.5
Cfa008733 Carpinus fangiana HOM05D000147 ORTHO05D005311 1.0e-09 67.8 193 29.0
AT1G50140 Arabidopsis thaliana HOM05D000147 ORTHO05D005311 1.4e-09 67.4 194 30.9
Sp3g17770 Schrenkiella parvula HOM05D000147 ORTHO05D005311 1.4e-09 67.4 188 30.9
Solyc02g014350.4 Solanum lycopersicum HOM05D000147 ORTHO05D005311 1.8e-09 67.0 196 29.1
Aa31LG8G6540 Aethionema arabicum HOM05D000147 ORTHO05D005311 2.3e-09 66.6 216 29.6
ATR0564G231 Amborella trichopoda HOM05D000147 ORTHO05D005311 2.3e-09 66.6 189 31.2
FAN07G2667 Fragaria x ananassa HOM05D000147 ORTHO05D005311 2.3e-09 66.6 209 28.7
Gorai.008G149300 Gossypium raimondii HOM05D000147 ORTHO05D005311 2.3e-09 66.6 216 29.6
Lalb_Chr19g0139371 Lupinus albus HOM05D000147 ORTHO05D005311 2.3e-09 66.6 198 28.8
MD13G1006500 Malus domestica HOM05D000147 ORTHO05D005311 2.3e-09 66.6 181 28.7
Glyma.11G101600 Glycine max HOM05D000147 ORTHO05D005311 4.0e-09 65.9 199 28.1
MD16G1001500 Malus domestica HOM05D000147 ORTHO05D005311 4.0e-09 65.9 190 30.5
TPR.G32339 Trifolium pratense HOM05D000147 ORTHO05D005311 5.2e-09 65.5 219 27.4
TAR628G0689 Trochodendron aralioides HOM05D000147 ORTHO05D005311 5.2e-09 65.5 181 32.0
Oeu016388.3 Olea europaea HOM05D000147 ORTHO05D005311 6.8e-09 65.1 176 29.0
FvH4_4g36860 Fragaria vesca HOM05D000147 ORTHO05D005311 8.8e-09 64.7 190 28.9
PSO170G3341 Papaver somniferum HOM05D000147 ORTHO05D005311 1.2e-08 64.3 190 28.4
Sp1g37010 Schrenkiella parvula HOM05D000147 ORTHO05D005311 1.2e-08 64.3 216 28.2
SGA_v2.0_scaffold90G27912 Striga asiatica HOM05D000147 ORTHO05D005311 1.2e-08 64.3 212 27.4
VMungo1127G1912 Vigna mungo HOM05D000147 ORTHO05D005311 1.2e-08 64.3 198 28.3
arahy.Tifrunner.gnm1.ann1.7MKI8I Arachis hypogaea HOM05D000147 ORTHO05D005311 1.5e-08 63.9 191 29.8
MELO3C023601.2 Cucumis melo HOM05D000147 ORTHO05D005311 1.5e-08 63.9 210 28.1
QL03p044068 Quercus lobata HOM05D000147 ORTHO05D005311 1.5e-08 63.9 206 28.6
Sed0001066 Sechium edule HOM05D000147 ORTHO05D005311 1.5e-08 63.9 192 28.6
Hund08554 Selenicereus undatus HOM05D000147 ORTHO05D005311 1.5e-08 63.9 204 29.4
A01p34960 Brassica napus HOM05D000147 ORTHO05D005311 2.0e-08 63.5 186 28.5
Lj3g0018243 Lotus japonicus HOM05D000147 ORTHO05D005311 2.0e-08 63.5 216 26.9
Potri.007G069800 Populus trichocarpa HOM05D000147 ORTHO05D005311 2.0e-08 63.5 195 30.8
RcHm_v2.0_Chr4g0446611 Rosa chinensis HOM05D000147 ORTHO05D005311 2.0e-08 63.5 210 27.1
Aa31LG10G4010 Aethionema arabicum HOM05D000147 ORTHO05D005311 2.6e-08 63.2 211 28.4
Duzib248G1409 Durio zibethinus HOM05D000147 ORTHO05D005311 2.6e-08 63.2 217 28.1
Eucgr.G02569 Eucalyptus grandis HOM05D000147 ORTHO05D005311 2.6e-08 63.2 218 31.2
Thecc.02G160800 Theobroma cacao HOM05D000147 ORTHO05D005311 2.6e-08 63.2 212 27.4
GSVIVG01012038001 Vitis vinifera HOM05D000147 ORTHO05D005311 2.6e-08 63.2 217 30.0
ClCG09G004590 Citrullus lanatus HOM05D000147 ORTHO05D005311 3.4e-08 62.8 210 28.6
Sc10g0006770 Simmondsia chinensis HOM05D000147 ORTHO05D005311 3.4e-08 62.8 194 27.8
Ah.01g001490 Amaranthus hybridus HOM05D000147 ORTHO05D005311 5.7e-08 62.0 182 29.7
CsaV3_7G030550 Cucumis sativus L. HOM05D000147 ORTHO05D005311 5.7e-08 62.0 210 27.6
HanXRQChr06g0171471 Helianthus annuus HOM05D000147 ORTHO05D005311 5.7e-08 62.0 190 29.5
Prupe.1G346700 Prunus persica HOM05D000147 ORTHO05D005311 5.7e-08 62.0 195 28.7
Ah.01g012370 Amaranthus hybridus HOM05D000147 ORTHO05D005311 7.5e-08 61.6 200 27.0
PGR142G0037 Punica granatum HOM05D000147 ORTHO05D005311 7.5e-08 61.6 220 27.3
Aqoxy6G00466 Aquilegia oxysepala HOM05D000147 ORTHO05D005311 9.8e-08 61.2 210 26.2
C03p89500 Brassica napus HOM05D000147 ORTHO05D005311 9.8e-08 61.2 216 28.7
AUR62017703 Chenopodium quinoa HOM05D000147 ORTHO05D005311 9.8e-08 61.2 214 29.0
FAN17G2876 Fragaria x ananassa HOM05D000147 ORTHO05D005311 9.8e-08 61.2 225 27.6
TWI74G0983 Tripterygium wilfordii HOM05D000147 ORTHO05D005311 9.8e-08 61.2 198 29.8
TAR381G0407 Trochodendron aralioides HOM05D000147 ORTHO05D005311 9.8e-08 61.2 219 27.9
BcaC01g01214 Brassica carinata HOM05D000147 ORTHO05D005311 1.3e-07 60.8 216 28.7
BolC3t21264H Brassica oleracea HOM05D000147 ORTHO05D005311 1.3e-07 60.8 216 28.7
Thhalv10011206m.g Eutrema salsugineum HOM05D000147 ORTHO05D005311 1.3e-07 60.8 211 27.5
FAN12G4124 Fragaria x ananassa HOM05D000147 ORTHO05D005311 1.3e-07 60.8 210 27.6
Lj6C720G7 Lonicera japonica HOM05D000147 ORTHO05D005311 1.3e-07 60.8 242 26.9
DCAR_002570 Daucus carota HOM05D000147 ORTHO05D005311 2.2e-07 60.1 192 28.1
Migut.D01933 Erythranthe guttata HOM05D000147 ORTHO05D005311 2.2e-07 60.1 159 30.8
Manes.02G219800 Manihot esculenta HOM05D000147 ORTHO05D005311 2.2e-07 60.1 190 28.9
AL1G57780 Arabidopsis lyrata HOM05D000147 ORTHO05D005311 2.8e-07 59.7 214 29.0
A08p03310 Brassica napus HOM05D000147 ORTHO05D005311 2.8e-07 59.7 216 28.2
BraA08t32364Z Brassica rapa HOM05D000147 ORTHO05D005311 2.8e-07 59.7 216 28.2
Ciclev10030948m.g Citrus clementina HOM05D000147 ORTHO05D005311 2.8e-07 59.7 180 29.4
Duzib132G0553 Durio zibethinus HOM05D000147 ORTHO05D005311 2.8e-07 59.7 215 27.4
Nn5g28890 Nelumbo nucifera HOM05D000147 ORTHO05D005311 2.8e-07 59.7 217 27.6
Potri.005G093300 Populus trichocarpa HOM05D000147 ORTHO05D005311 2.8e-07 59.7 201 33.3
SalBow2G1925 Salvia bowleyana HOM05D000147 ORTHO05D005311 2.8e-07 59.7 191 31.4
CARHR040190 Cardamine hirsuta HOM05D000147 ORTHO05D005311 3.7e-07 59.3 165 31.5
Cc11_g00140 Coffea canephora HOM05D000147 ORTHO05D005311 3.7e-07 59.3 214 27.1
Haze_11747 Corylus avellana HOM05D000147 ORTHO05D025190 3.7e-07 59.3 166 31.3
Glyma.12G027500 Glycine max HOM05D000147 ORTHO05D005311 3.7e-07 59.3 218 26.1
PSO210G5900 Papaver somniferum HOM05D000147 ORTHO05D005311 3.7e-07 59.3 190 27.4
Rhsim09G0074800 Rhododendron simsii HOM05D000147 ORTHO05D005311 6.3e-07 58.5 199 27.1
HanXRQChr15g0472181 Helianthus annuus HOM05D000147 ORTHO05D005311 8.3e-07 58.2 183 27.9
C01p44370 Brassica napus HOM05D000147 ORTHO05D005311 2.4e-06 56.6 208 26.0
Carub.0001s3929 Capsella rubella HOM05D000147 ORTHO05D005311 2.4e-06 56.6 217 28.1
Lj3g0004493 Lotus japonicus HOM05D000147 ORTHO05D025190 2.4e-06 56.6 184 26.1
Sabra07G0057300 Salix brachista HOM05D000147 ORTHO05D005311 2.4e-06 56.6 167 30.5
Phvul.011G030700 Phaseolus vulgaris HOM05D000147 ORTHO05D005311 4.1e-06 55.8 219 26.5
CDE04G2917 Ceratophyllum demersum HOM05D000147 ORTHO05D005311 5.4e-06 55.5 215 26.0
Thhalv10019988m.g Eutrema salsugineum HOM05D000147 ORTHO05D005311 5.4e-06 55.5 176 27.8


User provided reference genes

Program Settings