Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19082 Striga asiatica HOM05D007272 ORTHO05D009305 5.1e-82 307.8 163 100.0
SGA_v2.0_scaffold135G34775 Striga asiatica HOM05D007118 ORTHO05D008957 6.5e-69 264.2 157 82.2
SGA_v2.0_scaffold52G19148 Striga asiatica HOM05D007272 ORTHO05D009305 1.9e-52 209.5 141 72.3
Migut.H00895 Erythranthe guttata HOM05D007272 ORTHO05D009305 8.6e-29 131.0 158 48.1
SGA_v2.0_scaffold52G19157 Striga asiatica HOM05D016586 ORTHO05D009305 1.6e-27 126.7 70 90.0
MSTRG.3220 Avicennia marina HOM05D007272 ORTHO05D009305 8.0e-27 124.4 145 47.6
Oeu037173.1 Olea europaea HOM05D007272 ORTHO05D009305 5.2e-26 121.7 157 43.9
CSS0013465 Camellia sinensis var. sinensis HOM05D007272 ORTHO05D009305 1.2e-22 110.5 152 44.1
Atru.chr8.1898 Acer truncatum HOM05D007272 ORTHO05D009305 1.6e-22 110.2 160 43.1
RhsimUnG0199700 Rhododendron simsii HOM05D007272 ORTHO05D009305 1.6e-22 110.2 152 40.8
Actinidia23567 Actinidia chinensis HOM05D007272 ORTHO05D009305 7.8e-22 107.8 149 43.0
Ah.10g031300 Amaranthus hybridus HOM05D007272 ORTHO05D009305 1.3e-21 107.1 160 38.8
QL02p080768 Quercus lobata HOM05D007272 ORTHO05D009305 1.3e-21 107.1 161 41.6
GSVIVG01011351001 Vitis vinifera HOM05D007272 ORTHO05D009305 1.7e-21 106.7 145 39.3
arahy.Tifrunner.gnm1.ann1.091QIK Arachis hypogaea HOM05D007272 ORTHO05D009305 2.3e-21 106.3 158 41.1
Medtr6g011500 Medicago truncatula HOM05D007272 ORTHO05D009305 2.3e-21 106.3 157 40.1
arahy.Tifrunner.gnm1.ann1.UFNR33 Arachis hypogaea HOM05D007272 ORTHO05D009305 3.9e-21 105.5 158 41.1
Hma1.2p1_0449F.1_g155160 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.9e-21 105.5 157 39.5
RhsimUnG0056400 Rhododendron simsii HOM05D007272 ORTHO05D009305 3.9e-21 105.5 152 40.1
COL.COLO4_25162 Corchorus olitorius HOM05D007118 ORTHO05D008957 6.6e-21 104.8 148 40.5
Glyma.13G064500 Glycine max HOM05D007272 ORTHO05D009305 1.1e-20 104.0 157 41.4
EL10Ac2g02942 Beta vulgaris HOM05D007272 ORTHO05D009305 3.3e-20 102.4 159 39.6
vmacro05725 Vaccinium macrocarpon HOM05D007272 ORTHO05D009305 3.3e-20 102.4 152 39.5
QL02p080779 Quercus lobata HOM05D007272 ORTHO05D009305 4.3e-20 102.1 159 40.3
AUR62031636 Chenopodium quinoa HOM05D007272 ORTHO05D009305 1.2e-19 100.5 158 36.7
Ca_04270_v3 Cicer arietinum L. HOM05D007272 ORTHO05D009305 2.1e-19 99.8 161 35.4
Haze_14576 Corylus avellana HOM05D007272 ORTHO05D009305 2.1e-19 99.8 157 40.1
Phvul.004G026700 Phaseolus vulgaris HOM05D007272 ORTHO05D009305 2.1e-19 99.8 152 38.8
Potri.017G079100 Populus trichocarpa HOM05D007272 ORTHO05D009305 2.8e-19 99.4 157 41.4
TAR629G0691 Trochodendron aralioides HOM05D007272 ORTHO05D009305 3.6e-19 99.0 157 39.5
Sabra17G0070200 Salix brachista HOM05D007272 ORTHO05D009305 4.7e-19 98.6 147 42.2
Thecc.04G075900 Theobroma cacao HOM05D007272 ORTHO05D009305 4.7e-19 98.6 154 39.0
Duzib187G0958 Durio zibethinus HOM05D007272 ORTHO05D009305 6.1e-19 98.2 158 38.6
Glyma.19G020400 Glycine max HOM05D007272 ORTHO05D009305 6.1e-19 98.2 154 40.3
VMungo0464G0783 Vigna mungo HOM05D007272 ORTHO05D009305 6.1e-19 98.2 152 38.8
Cc07_g03090 Coffea canephora HOM05D007272 ORTHO05D009305 1.8e-18 96.7 153 40.5
ECA238G2465 Erigeron canadensis HOM05D007272 ORTHO05D009305 2.3e-18 96.3 154 38.3
SalBow1G7111 Salvia bowleyana HOM05D007272 ORTHO05D009305 4.0e-18 95.5 151 39.1
Lalb_Chr21g0318941 Lupinus albus HOM05D007272 ORTHO05D009305 5.2e-18 95.1 149 38.3
Manes.17G022200 Manihot esculenta HOM05D007272 ORTHO05D009305 8.9e-18 94.4 145 37.2
Sc10g0003770 Simmondsia chinensis HOM05D007272 ORTHO05D009305 1.2e-17 94.0 155 38.7
Cpa.g.sc14.36 Carica papaya HOM05D007272 ORTHO05D009305 2.0e-17 93.2 90 47.8
Cfa007518 Carpinus fangiana HOM05D007272 ORTHO05D009305 2.6e-17 92.8 157 35.7
CiPaw.04G019400 Carya illinoinensis HOM05D007272 ORTHO05D009305 3.4e-17 92.4 150 38.7
Ciclev10011541m.g Citrus clementina HOM05D007272 ORTHO05D009305 5.8e-17 91.7 157 37.6
DCAR_021668 Daucus carota HOM05D007272 ORTHO05D009305 1.7e-16 90.1 145 34.5
Gorai.006G025400 Gossypium raimondii HOM05D007272 ORTHO05D009305 1.7e-16 90.1 156 35.3
TWI34G0655 Tripterygium wilfordii HOM05D007272 ORTHO05D009305 1.7e-16 90.1 157 37.6
TPR.G4317 Trifolium pratense HOM05D007272 ORTHO05D009305 2.9e-16 89.4 89 48.3
Gohir.A09G022200 Gossypium hirsutum HOM05D007272 ORTHO05D009305 8.3e-16 87.8 156 35.3
Gohir.D09G021400 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.1e-15 87.4 156 34.6
PSO591G0492 Papaver somniferum HOM05D007272 ORTHO05D009305 1.1e-15 87.4 91 49.5
PSO832G2300 Papaver somniferum HOM05D007272 ORTHO05D009305 1.9e-15 86.7 90 45.6
Nitab4.5_0009739g0030 Nicotiana tabacum HOM05D007272 ORTHO05D009305 2.4e-15 86.3 157 36.3
CANSAT64G0717 Cannabis sativa HOM05D007272 ORTHO05D009305 9.2e-15 84.3 130 38.5
Nn3g17142 Nelumbo nucifera HOM05D007272 ORTHO05D009305 9.2e-15 84.3 143 35.7
HPP92_000629 Vanilla planifolia HOM05D007272 ORTHO05D009305 9.2e-15 84.3 96 42.7
Nitab4.5_0000564g0300 Nicotiana tabacum HOM05D007272 ORTHO05D009305 1.2e-14 84.0 157 35.7
Lj2g0009951 Lotus japonicus HOM05D007272 ORTHO05D009305 1.6e-14 83.6 133 37.6
Prupe.3G271100 Prunus persica HOM05D007272 ORTHO05D009305 2.7e-14 82.8 156 35.9
Lj2g0023599 Lotus japonicus HOM05D007272 ORTHO05D009305 3.5e-14 82.4 150 36.7
Lj7C400T1 Lonicera japonica HOM05D007272 ORTHO05D009305 6.0e-14 81.6 152 38.8
THA.LOC104822369 Tarenaya hassleriana HOM05D007272 ORTHO05D009305 6.0e-14 81.6 158 36.1
Lsat_1_v5_gn_2_88701 Lactuca sativa HOM05D007272 ORTHO05D009305 7.8e-14 81.3 148 34.5
Zm00001eb121640 Zea mays HOM05D007272 ORTHO05D009305 7.8e-14 81.3 157 35.7
Sopen02g032460 Solanum pennellii HOM05D007272 ORTHO05D009305 1.0e-13 80.9 156 36.5
Solyc02g087730.3 Solanum lycopersicum HOM05D007272 ORTHO05D009305 1.3e-13 80.5 156 36.5
MD17G1048100 Malus domestica HOM05D007272 ORTHO05D009305 8.6e-13 77.8 146 33.6
Mapoly0135s0023 Marchantia polymorpha HOM05D007272 ORTHO05D009305 1.1e-12 77.4 147 32.7
PGR142G3376 Punica granatum HOM05D007272 ORTHO05D009305 1.1e-12 77.4 145 35.2
MD17G1048000 Malus domestica HOM05D007272 ORTHO05D009305 1.9e-12 76.6 164 35.4
Hund13235 Selenicereus undatus HOM05D007272 ORTHO05D009305 1.9e-12 76.6 90 44.4
Gorai.012G056400 Gossypium raimondii HOM05D007272 ORTHO05D009305 2.5e-12 76.3 96 42.7
Gohir.D04G050866 Gossypium hirsutum HOM05D007272 ORTHO05D009305 7.3e-12 74.7 96 41.7
ATR0706G038 Amborella trichopoda HOM05D007272 ORTHO05D009305 9.5e-12 74.3 95 41.1
Gohir.A05G363800 Gossypium hirsutum HOM05D007272 ORTHO05D009305 1.2e-11 73.9 96 41.7
Os01g0185400 Oryza sativa ssp. japonica HOM05D007272 ORTHO05D009305 1.2e-11 73.9 90 45.6
ClCG10G014870 Citrullus lanatus HOM05D007272 ORTHO05D009305 2.8e-11 72.8 129 33.3
PGSC0003DMG400001312 Solanum tuberosum HOM05D007272 ORTHO05D009305 3.6e-11 72.4 158 34.2
Peaxi162Scf00129g00431 Petunia axillaris HOM05D007272 ORTHO05D009305 1.8e-10 70.1 157 34.4
CDE04G0606 Ceratophyllum demersum HOM05D007272 ORTHO05D009305 4.0e-10 68.9 87 40.2
Hma1.2p1_0449F.1_g155150 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.7e-08 62.4 157 29.3
Hma1.2p1_2982F.1_g331245 Hydrangea macrophylla HOM05D007272 ORTHO05D009305 3.7e-08 62.4 157 29.3
ATR0693G009 Amborella trichopoda HOM05D007272 ORTHO05D009305 8.3e-08 61.2 85 40.0


User provided reference genes

Program Settings