Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19068 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-238 828.9 396 100.0
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-57 227.3 349 41.8
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 4.4e-55 219.5 391 37.9
SGA_v2.0_scaffold481G52326 Striga asiatica HOM05D007685 ORTHO05D009136 7.6e-55 218.8 337 39.2
SGA_v2.0_scaffold52G19069 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-53 214.5 346 41.6
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-52 210.7 386 38.9
SGA_v2.0_scaffold205G41700 Striga asiatica HOM05D007685 ORTHO05D009136 2.7e-52 210.3 339 39.5
SGA_v2.0_scaffold66G22258 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-49 201.1 420 36.0
SGA_v2.0_scaffold66G22255 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-49 200.3 417 35.3
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-49 199.9 432 35.0
SGA_v2.0_scaffold205G41698 Striga asiatica HOM05D007685 ORTHO05D009136 8.1e-49 198.7 447 36.5
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 2.4e-48 197.2 387 38.2
SGA_v2.0_scaffold240G44161 Striga asiatica HOM05D007685 ORTHO05D009136 6.9e-48 195.7 422 36.7
SGA_v2.0_scaffold70G23606 Striga asiatica HOM05D000522 ORTHO05D000565 2.6e-47 193.7 295 42.7
SGA_v2.0_scaffold240G44172 Striga asiatica HOM05D007685 ORTHO05D009136 4.5e-47 193.0 338 39.3
SGA_v2.0_scaffold79G25498 Striga asiatica HOM05D007685 ORTHO05D009136 5.8e-47 192.6 428 35.3
SGA_v2.0_scaffold66G22356 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-46 189.9 406 36.9
SGA_v2.0_scaffold10G05461 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-44 184.5 419 35.6
SGA_v2.0_scaffold27G11433 Striga asiatica HOM05D007685 ORTHO05D009136 7.4e-42 175.6 306 39.5
SGA_v2.0_scaffold204G41656 Striga asiatica HOM05D007685 ORTHO05D009136 4.0e-40 169.9 432 34.5
SGA_v2.0_scaffold123G33494 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-39 168.3 384 35.7
SGA_v2.0_scaffold98G29350 Striga asiatica HOM05D007685 ORTHO05D009136 3.2e-37 160.2 336 36.9
SGA_v2.0_scaffold27G11432 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-36 157.9 453 33.1
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.5e-36 156.8 403 33.3
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.0e-35 155.2 373 33.2
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.8e-35 154.5 355 33.5
SGA_v2.0_scaffold52G19054 Striga asiatica HOM05D007685 ORTHO05D009136 8.7e-35 152.1 91 85.7
Migut.H00978 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.1e-34 151.8 348 33.3
SGA_v2.0_scaffold364G49991 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-34 151.4 418 31.8
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.6e-33 147.9 343 33.2
SGA_v2.0_scaffold36G14300 Striga asiatica HOM05D007685 ORTHO05D009136 4.0e-32 143.3 439 30.5
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.5e-30 136.0 411 28.7
SGA_v2.0_scaffold138G35171 Striga asiatica HOM05D007685 ORTHO05D009136 9.3e-29 132.1 416 30.0
Migut.H00447 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.1e-28 131.0 347 31.1
SGA_v2.0_scaffold98G29349 Striga asiatica HOM05D007685 ORTHO05D009136 2.7e-28 130.6 319 35.4
Migut.K00780 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.5e-26 124.0 358 31.8
SGA_v2.0_scaffold11G05774 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-26 124.0 350 33.4
SGA_v2.0_scaffold228G43240 Striga asiatica HOM05D007685 ORTHO05D009136 9.7e-26 122.1 366 32.0
SGA_v2.0_scaffold79G25502 Striga asiatica HOM05D007685 ORTHO05D009136 2.2e-25 120.9 243 35.0
SGA_v2.0_scaffold461G51963 Striga asiatica HOM05D007685 ORTHO05D009136 4.8e-25 119.8 362 32.3
SGA_v2.0_scaffold125G33660 Striga asiatica HOM05D007685 ORTHO05D009136 6.3e-25 119.4 444 28.2
Migut.K00645 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-24 118.2 370 29.2
Migut.K00648 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.2e-23 115.2 369 27.9
SGA_v2.0_scaffold36G14304 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-23 115.2 302 31.8
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 5.9e-23 112.8 412 28.9
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 5.0e-22 109.8 345 28.1
SGA_v2.0_scaffold9G05054 Striga asiatica HOM05D007685 ORTHO05D009136 6.5e-22 109.4 369 29.8
Migut.D00968 Erythranthe guttata HOM05D007685 ORTHO05D009136 8.5e-22 109.0 362 31.5
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 8.5e-22 109.0 401 28.4
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-21 108.6 386 29.5
SGA_v2.0_scaffold227G43147 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-21 108.6 249 35.3
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-21 108.6 345 28.1
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-21 108.6 345 28.1
Migut.K00649 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.2e-21 107.1 201 35.3
SGA_v2.0_scaffold10G05459 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-20 104.4 146 41.8
Migut.K00647 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.7e-20 104.0 201 34.8
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 1.0e-19 102.1 338 27.8
Migut.C00362 Erythranthe guttata HOM05D007685 ORTHO05D009136 9.7e-18 95.5 330 27.9
Migut.H00781 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.8e-16 91.3 177 34.5
Migut.H00267 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.1e-16 90.5 326 28.5
SGA_v2.0_scaffold240G44169 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-15 88.2 375 26.7
TAR626G0819 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.7e-15 85.9 330 28.5
SGA_v2.0_scaffold3G01717 Striga asiatica HOM05D007685 ORTHO05D009136 5.0e-14 83.2 98 52.0
SGA_v2.0_scaffold186G40186 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-13 82.0 319 28.8
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.2e-13 80.1 213 31.9
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 4.2e-13 80.1 410 25.1
SGA_v2.0_scaffold18G08226 Striga asiatica HOM05D007685 ORTHO05D009136 4.2e-13 80.1 97 42.3
SGA_v2.0_scaffold205G41702 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-12 78.2 99 47.5
SGA_v2.0_scaffold135G34952 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-12 77.8 399 22.3
FAN20G1383 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.7e-12 76.6 330 26.7
SGA_v2.0_scaffold211G42108 Striga asiatica HOM05D007685 ORTHO05D009136 4.7e-12 76.6 143 35.7
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 6.1e-12 76.3 394 24.1
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.0e-11 75.5 327 24.2
Migut.K00246 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.1e-10 72.0 234 28.6
SGA_v2.0_scaffold205G41695 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-10 72.0 152 34.9
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-10 72.0 266 27.1
SGA_v2.0_scaffold51G18692 Striga asiatica HOM05D007685 ORTHO05D009136 2.0e-10 71.2 174 33.9
Cfa009638 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.6e-10 70.9 301 26.9
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 3.3e-10 70.5 311 26.4
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 3.3e-10 70.5 328 24.1
SGA_v2.0_scaffold52G19067 Striga asiatica HOM05D007685 ORTHO05D009136 3.3e-10 70.5 177 30.5
SGA_v2.0_scaffold240G44166 Striga asiatica HOM05D007685 ORTHO05D009136 7.4e-10 69.3 148 35.8
Lj3g0002558 Lotus japonicus HOM05D000151 ORTHO05D000074 1.3e-09 68.6 318 24.2
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-09 68.6 188 29.3
Dinv01675 Davidia involucrata HOM05D000151 ORTHO05D000074 1.7e-09 68.2 296 24.7
Dinv22139 Davidia involucrata HOM05D007685 ORTHO05D009136 1.7e-09 68.2 239 26.4
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 1.7e-09 68.2 291 27.5
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 3.7e-09 67.0 321 23.7
TAR626G0415 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.7e-09 67.0 305 28.2
Lj2P459T34 Lonicera japonica HOM05D000151 ORTHO05D000074 4.8e-09 66.6 313 25.2
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 6.3e-09 66.2 95 40.0
CSS0022996 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.8e-08 64.7 323 25.4
TWI31G0931 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.4e-08 64.3 298 26.5
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 3.1e-08 63.9 338 25.4
ClCG05G015310 Citrullus lanatus HOM05D000151 ORTHO05D000074 3.1e-08 63.9 295 28.1
Migut.G00592 Erythranthe guttata HOM05D000151 ORTHO05D000074 4.1e-08 63.5 165 29.7
Nitab4.5_0000025g0120 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.1e-08 63.5 266 23.3
SGA_v2.0_scaffold138G35173 Striga asiatica HOM05D007685 ORTHO05D009136 5.3e-08 63.2 219 32.0
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 7.0e-08 62.8 325 25.5
Dinv35548 Davidia involucrata HOM05D000151 ORTHO05D000074 1.2e-07 62.0 371 22.4
Eucgr.H00116 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.2e-07 62.0 329 24.6
FvH4_4g30091 Fragaria vesca HOM05D022879 ORTHO05D000074 1.2e-07 62.0 327 23.9
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-07 62.0 316 23.4
Aqoxy4G01250 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.5e-07 61.6 306 25.8
CiPaw.08G069900 Carya illinoinensis HOM05D000151 ORTHO05D000074 2.0e-07 61.2 296 27.0
FvH4_3g43771 Fragaria vesca HOM05D022879 ORTHO05D000074 2.0e-07 61.2 370 24.3
TAR525G0003 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.0e-07 61.2 304 26.0
EL10Ac3g05443 Beta vulgaris HOM05D000151 ORTHO05D000074 2.6e-07 60.8 313 24.9
SGA_v2.0_scaffold300G47760 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-07 60.8 113 38.1
Haze_23002 Corylus avellana HOM05D000151 ORTHO05D000074 5.9e-07 59.7 298 25.5
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 5.9e-07 59.7 259 23.6
Lj2P493T39 Lonicera japonica HOM05D000151 ORTHO05D000074 1.0e-06 58.9 307 26.7
QL01p024159 Quercus lobata HOM05D000151 ORTHO05D000074 1.0e-06 58.9 281 25.6
Rhsim06G0010000 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.0e-06 58.9 287 25.8
SalBow5G4249 Salvia bowleyana HOM05D007685 ORTHO05D009136 1.0e-06 58.9 332 24.7
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 1.3e-06 58.5 280 25.4
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 1.3e-06 58.5 303 27.1
TWI63G1457 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.7e-06 58.2 410 21.0
Cpa.g.sc26.244 Carica papaya HOM05D000151 ORTHO05D000074 2.2e-06 57.8 294 24.1
Os03g0802100 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 2.2e-06 57.8 316 25.0
SGA_v2.0_scaffold11G05775 Striga asiatica HOM05D007685 ORTHO05D009136 2.2e-06 57.8 107 40.2
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 2.9e-06 57.4 329 23.4
Nitab4.5_0002346g0060 Nicotiana tabacum HOM05D000151 ORTHO05D000074 5.0e-06 56.6 304 25.0
Lj2C500G3 Lonicera japonica HOM05D000151 ORTHO05D000074 6.5e-06 56.2 236 27.1
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 6.5e-06 56.2 288 25.3
Dinv03027 Davidia involucrata HOM05D000151 ORTHO05D000074 8.5e-06 55.8 242 26.4
SalBow3G2007 Salvia bowleyana HOM05D000151 ORTHO05D000074 8.5e-06 55.8 293 24.2
TAR636G2826 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.5e-06 55.8 308 25.3


User provided reference genes

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