Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19067 Striga asiatica HOM05D007685 ORTHO05D009136 2.0e-94 349.0 164 100.0
SGA_v2.0_scaffold52G19069 Striga asiatica HOM05D007685 ORTHO05D009136 3.1e-55 218.8 197 56.9
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 9.1e-55 217.2 197 54.8
SGA_v2.0_scaffold10G05461 Striga asiatica HOM05D007685 ORTHO05D009136 7.0e-31 137.9 168 45.8
SGA_v2.0_scaffold211G42108 Striga asiatica HOM05D007685 ORTHO05D009136 6.6e-29 131.3 127 55.9
SGA_v2.0_scaffold18G08226 Striga asiatica HOM05D007685 ORTHO05D009136 4.3e-28 128.6 101 64.4
SGA_v2.0_scaffold481G52326 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-27 126.3 107 59.8
SGA_v2.0_scaffold205G41698 Striga asiatica HOM05D007685 ORTHO05D009136 4.0e-26 122.1 122 54.9
SGA_v2.0_scaffold205G41700 Striga asiatica HOM05D007685 ORTHO05D009136 5.2e-26 121.7 94 64.9
SGA_v2.0_scaffold125G33660 Striga asiatica HOM05D007685 ORTHO05D009136 6.4e-24 114.8 88 65.9
SGA_v2.0_scaffold205G41702 Striga asiatica HOM05D007685 ORTHO05D009136 6.4e-24 114.8 101 61.4
SGA_v2.0_scaffold10G05459 Striga asiatica HOM05D007685 ORTHO05D009136 2.4e-23 112.8 148 43.2
SGA_v2.0_scaffold98G29349 Striga asiatica HOM05D007685 ORTHO05D009136 3.2e-23 112.5 97 61.9
SGA_v2.0_scaffold205G41695 Striga asiatica HOM05D007685 ORTHO05D009136 7.1e-23 111.3 110 55.5
SGA_v2.0_scaffold227G43147 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-22 110.2 94 60.6
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-22 108.6 104 55.8
SGA_v2.0_scaffold36G14300 Striga asiatica HOM05D007685 ORTHO05D009136 4.6e-22 108.6 104 56.7
SGA_v2.0_scaffold98G29350 Striga asiatica HOM05D007685 ORTHO05D009136 7.8e-22 107.8 97 59.8
SGA_v2.0_scaffold364G49991 Striga asiatica HOM05D007685 ORTHO05D009136 2.3e-21 106.3 91 61.5
SGA_v2.0_scaffold27G11433 Striga asiatica HOM05D007685 ORTHO05D009136 8.6e-21 104.4 190 36.8
SGA_v2.0_scaffold66G22255 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-20 102.8 194 37.6
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 4.3e-20 102.1 92 54.3
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.6e-20 101.7 98 51.0
SGA_v2.0_scaffold36G14304 Striga asiatica HOM05D007685 ORTHO05D009136 7.3e-20 101.3 97 55.7
SGA_v2.0_scaffold204G41656 Striga asiatica HOM05D007685 ORTHO05D009136 9.5e-20 100.9 99 57.6
SGA_v2.0_scaffold3G01717 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-19 99.0 105 51.4
SGA_v2.0_scaffold66G22356 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-18 97.4 115 49.6
SGA_v2.0_scaffold66G22258 Striga asiatica HOM05D007685 ORTHO05D009136 2.4e-18 96.3 113 48.7
SGA_v2.0_scaffold240G44169 Striga asiatica HOM05D007685 ORTHO05D009136 3.1e-18 95.9 114 50.0
SGA_v2.0_scaffold240G44161 Striga asiatica HOM05D007685 ORTHO05D009136 8.9e-18 94.4 193 36.3
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-17 93.6 92 54.3
SGA_v2.0_scaffold27G11432 Striga asiatica HOM05D007685 ORTHO05D009136 2.0e-17 93.2 94 56.4
SGA_v2.0_scaffold205G41697 Striga asiatica HOM05D007685 ORTHO05D009136 9.9e-17 90.9 97 49.5
SGA_v2.0_scaffold240G44172 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-16 90.5 92 52.2
SGA_v2.0_scaffold123G33494 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-16 90.1 161 40.4
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.2e-16 89.7 116 44.8
SGA_v2.0_scaffold110G31308 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-16 89.0 91 57.1
SGA_v2.0_scaffold79G25498 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-16 89.0 105 50.5
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.4e-15 86.3 82 53.7
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.4e-15 86.3 96 50.0
SGA_v2.0_scaffold240G44166 Striga asiatica HOM05D007685 ORTHO05D009136 2.4e-15 86.3 105 48.6
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.2e-15 85.5 96 50.0
SGA_v2.0_scaffold106G30572 Striga asiatica HOM05D000403 ORTHO05D009136 5.4e-15 85.1 112 45.5
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.1e-15 84.7 79 53.2
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-14 83.6 93 49.5
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-14 83.2 98 50.0
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 2.1e-14 83.2 98 48.0
SGA_v2.0_scaffold461G51963 Striga asiatica HOM05D007685 ORTHO05D009136 3.5e-14 82.4 74 55.4
Migut.H00978 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.6e-14 82.0 104 46.2
Migut.K00645 Erythranthe guttata HOM05D007685 ORTHO05D009136 7.8e-14 81.3 96 47.9
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-13 80.1 98 48.0
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 3.0e-13 79.3 92 45.7
SGA_v2.0_scaffold9G05054 Striga asiatica HOM05D007685 ORTHO05D009136 1.1e-12 77.4 74 50.0
Migut.K00780 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.5e-12 77.0 105 42.9
Migut.D00968 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.9e-12 76.6 75 53.3
SGA_v2.0_scaffold228G43240 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-12 76.3 74 52.7
SGA_v2.0_scaffold135G34952 Striga asiatica HOM05D007685 ORTHO05D009136 5.6e-12 75.1 112 42.0
SGA_v2.0_scaffold52G19068 Striga asiatica HOM05D007685 ORTHO05D009136 5.6e-12 75.1 177 30.5
SGA_v2.0_scaffold51G18692 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-11 73.9 81 51.9
SGA_v2.0_scaffold79G25502 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-11 73.9 184 32.1
Migut.K00649 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.1e-11 73.2 133 33.8
SGA_v2.0_scaffold138G35173 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-11 72.8 197 29.9
SGA_v2.0_scaffold52G19054 Striga asiatica HOM05D007685 ORTHO05D009136 6.2e-11 71.6 92 44.6
Migut.H00447 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.1e-10 70.9 106 42.5
SGA_v2.0_scaffold300G47760 Striga asiatica HOM05D007685 ORTHO05D009136 1.4e-10 70.5 107 42.1
CAN.G760.4 Capsicum annuum HOM05D007685 ORTHO05D009136 1.8e-10 70.1 103 40.8
Migut.C00362 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.0e-10 68.9 89 42.7
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 6.9e-10 68.2 89 42.7
Migut.K00648 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.9e-10 68.2 79 44.3
SGA_v2.0_scaffold9G05056 Striga asiatica HOM05D007685 ORTHO05D009136 6.9e-10 68.2 74 44.6
SGA_v2.0_scaffold11G05774 Striga asiatica HOM05D007685 ORTHO05D009136 9.0e-10 67.8 103 42.7
SGA_v2.0_scaffold135G34957 Striga asiatica HOM05D007685 ORTHO05D009136 9.0e-10 67.8 97 39.2
SGA_v2.0_scaffold186G40186 Striga asiatica HOM05D007685 ORTHO05D009136 9.0e-10 67.8 90 43.3
Migut.K00246 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.2e-09 67.4 141 33.3
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 1.5e-09 67.0 122 33.6
SGA_v2.0_scaffold11G05775 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-09 67.0 104 41.3
SGA_v2.0_scaffold138G35171 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-09 67.0 104 43.3
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 5.8e-09 65.1 88 37.5
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 1.3e-08 63.9 94 37.2
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 1.7e-08 63.5 94 37.2
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-08 63.5 92 38.0
Dinv22134 Davidia involucrata HOM05D007685 ORTHO05D009136 3.8e-08 62.4 90 43.3
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-08 62.4 92 38.0
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-08 62.4 92 38.0
MD10G1231500 Malus domestica HOM05D000151 ORTHO05D000074 4.9e-08 62.0 96 36.5
Potri.004G134900 Populus trichocarpa HOM05D000151 ORTHO05D000074 4.9e-08 62.0 94 37.2
Migut.K00435 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.4e-08 61.6 94 44.7
Migut.H00267 Erythranthe guttata HOM05D007685 ORTHO05D009136 8.4e-08 61.2 201 27.9
TWI23G0794 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.1e-07 60.8 87 37.9
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 1.4e-07 60.5 69 47.8
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-07 60.1 89 38.2
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.9e-07 60.1 91 35.2
AUR62017260 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.2e-07 59.3 121 33.1
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 3.2e-07 59.3 90 40.0
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.2e-07 58.9 94 40.4
Aqoxy2G03785 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.4e-07 58.5 78 46.2
Migut.B00574 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.4e-07 58.5 77 42.9
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.4e-07 58.5 94 40.4
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.4e-07 58.5 94 40.4
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.4e-07 58.5 94 40.4
arahy.Tifrunner.gnm1.ann1.HLF42N Arachis hypogaea HOM05D000151 ORTHO05D000074 7.1e-07 58.2 83 37.3
Oeu049040.1 Olea europaea HOM05D000151 ORTHO05D000074 7.1e-07 58.2 94 37.2
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 7.1e-07 58.2 74 39.2
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.1e-07 58.2 102 36.3
Aqoxy7G01060 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.3e-07 57.8 91 35.2
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 9.3e-07 57.8 113 33.6
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 9.3e-07 57.8 95 37.9
Eucgr.H00114 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.2e-06 57.4 95 34.7
Prupe.2G253900 Prunus persica HOM05D000151 ORTHO05D000074 1.2e-06 57.4 89 37.1
Prupe.6G184200 Prunus persica HOM05D000151 ORTHO05D000074 1.2e-06 57.4 92 33.7
QL04p008960 Quercus lobata HOM05D000151 ORTHO05D000074 1.2e-06 57.4 94 34.0
RcHm_v2.0_Chr3g0452431 Rosa chinensis HOM05D000151 ORTHO05D000074 1.2e-06 57.4 92 34.8
FAN12G3235 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-06 57.0 84 35.7
Lalb_Chr17g0336101 Lupinus albus HOM05D000151 ORTHO05D000074 1.6e-06 57.0 87 33.3
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 1.6e-06 57.0 85 36.5
Rhsim09G0042100 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.6e-06 57.0 93 36.6
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-06 57.0 78 39.7
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-06 57.0 78 41.0
TAR365G0814 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.6e-06 57.0 92 35.9
QL04p019119 Quercus lobata HOM05D000151 ORTHO05D000074 2.1e-06 56.6 94 34.0
Dinv27123 Davidia involucrata HOM05D000151 ORTHO05D000074 2.7e-06 56.2 151 28.5
Duzib052G1217 Durio zibethinus HOM05D000151 ORTHO05D000074 3.5e-06 55.8 84 40.5
Hma1.2p1_0112F.1_g054880 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 3.5e-06 55.8 93 33.3
Prupe.6G184600 Prunus persica HOM05D000151 ORTHO05D000074 3.5e-06 55.8 92 33.7
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 3.5e-06 55.8 92 30.4
QL04p009352 Quercus lobata HOM05D000151 ORTHO05D000074 4.6e-06 55.5 94 34.0
arahy.Tifrunner.gnm1.ann1.IUX4N1 Arachis hypogaea HOM05D000151 ORTHO05D000074 6.0e-06 55.1 83 36.1
SGA_v2.0_scaffold70G23606 Striga asiatica HOM05D000522 ORTHO05D000565 6.0e-06 55.1 53 60.4
MD13G1047500 Malus domestica HOM05D000151 ORTHO05D000074 7.8e-06 54.7 98 35.7
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 7.8e-06 54.7 83 34.9
TWI23G0668 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 7.8e-06 54.7 89 36.0


User provided reference genes

Program Settings