Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G19056 Striga asiatica HOM05D002721 ORTHO05D002919 7.7e-74 280.4 143 100.0
Gohir.D12G056350 Gossypium hirsutum HOM05D002721 ORTHO05D002919 3.1e-14 82.4 110 48.2
Gorai.008G059400 Gossypium raimondii HOM05D002721 ORTHO05D002919 3.1e-14 82.4 110 48.2
unitig_52.g17630 Utricularia gibba HOM05D002721 ORTHO05D002919 6.8e-14 81.3 148 38.5
Gohir.A12G056901 Gossypium hirsutum HOM05D002721 ORTHO05D002919 1.5e-13 80.1 110 46.4
arahy.Tifrunner.gnm1.ann1.8P3ZQ3 Arachis hypogaea HOM05D002721 ORTHO05D002919 1.7e-12 76.6 97 50.5
COL.COLO4_25875 Corchorus olitorius HOM05D002721 ORTHO05D002919 2.2e-12 76.3 123 43.1
Carub.0006s0983 Capsella rubella HOM05D002721 ORTHO05D002919 2.9e-12 75.9 130 41.5
GSVIVG01036512001 Vitis vinifera HOM05D002721 ORTHO05D002919 3.7e-12 75.5 129 41.1
Duzib211G0355 Durio zibethinus HOM05D002721 ORTHO05D002919 4.9e-12 75.1 101 47.5
arahy.Tifrunner.gnm1.ann1.AT6RDF Arachis hypogaea HOM05D002721 ORTHO05D002919 2.4e-11 72.8 97 48.5
Dinv33882 Davidia involucrata HOM05D002721 ORTHO05D002919 2.4e-11 72.8 110 41.8
Lalb_Chr21g0318111 Lupinus albus HOM05D002721 ORTHO05D002919 2.4e-11 72.8 129 41.9
CANSAT64G2265 Cannabis sativa HOM05D002721 ORTHO05D002919 3.2e-11 72.4 105 45.7
MD17G1067700 Malus domestica HOM05D002721 ORTHO05D002919 3.2e-11 72.4 145 35.2
QL02p063553 Quercus lobata HOM05D002721 ORTHO05D002919 4.1e-11 72.0 118 41.5
Thecc.04G110800 Theobroma cacao HOM05D002721 ORTHO05D002919 4.1e-11 72.0 101 47.5
BcaB08g37066 Brassica carinata HOM05D002721 ORTHO05D002919 5.4e-11 71.6 130 39.2
DCAR_007541 Daucus carota HOM05D002721 ORTHO05D002919 7.1e-11 71.2 105 43.8
RcHm_v2.0_Chr2g0164391 Rosa chinensis HOM05D002721 ORTHO05D002919 9.2e-11 70.9 105 46.7
Lalb_Chr17g0336741 Lupinus albus HOM05D002721 ORTHO05D002919 1.2e-10 70.5 79 58.2
Potri.017G106400 Populus trichocarpa HOM05D002721 ORTHO05D002919 1.2e-10 70.5 79 50.6
Rhsim08G0078700 Rhododendron simsii HOM05D002721 ORTHO05D002919 1.2e-10 70.5 144 38.9
AL6G22030 Arabidopsis lyrata HOM05D002721 ORTHO05D002919 1.6e-10 70.1 110 41.8
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.6e-10 70.1 110 40.9
Aa31LG3G15810 Aethionema arabicum HOM05D002721 ORTHO05D002919 2.1e-10 69.7 130 38.5
CARHR201870 Cardamine hirsuta HOM05D002721 ORTHO05D002919 2.1e-10 69.7 125 42.4
THA.LOC104823876 Tarenaya hassleriana HOM05D002721 ORTHO05D002919 2.1e-10 69.7 110 40.0
AT5G11390 Arabidopsis thaliana HOM05D002721 ORTHO05D002919 2.7e-10 69.3 110 42.7
Duzib248G1050 Durio zibethinus HOM05D002721 ORTHO05D002919 2.7e-10 69.3 152 38.2
Manes.02G061500 Manihot esculenta HOM05D002721 ORTHO05D002919 4.6e-10 68.6 92 44.6
Sp6g32210 Schrenkiella parvula HOM05D002721 ORTHO05D002919 6.0e-10 68.2 97 44.3
MD09G1077300 Malus domestica HOM05D002721 ORTHO05D002919 7.8e-10 67.8 145 35.2
Aqoxy3G00575 Aquilegia oxysepala HOM05D002721 ORTHO05D002919 1.0e-09 67.4 123 40.7
Hma1.2p1_0588F.1_g184620 Hydrangea macrophylla HOM05D002721 ORTHO05D002919 1.0e-09 67.4 79 51.9
Manes.01G105100 Manihot esculenta HOM05D002721 ORTHO05D002919 1.0e-09 67.4 118 39.0
Cfa007718 Carpinus fangiana HOM05D002721 ORTHO05D002919 1.3e-09 67.0 77 53.2
Duzib251G0850 Durio zibethinus HOM05D002721 ORTHO05D002919 1.3e-09 67.0 145 37.2
Eucgr.J01429 Eucalyptus grandis HOM05D002721 ORTHO05D002919 1.3e-09 67.0 110 41.8
Lalb_Chr04g0258291 Lupinus albus HOM05D002721 ORTHO05D002919 1.7e-09 66.6 71 59.2
MBI14_g08213_MAGBIO Magnolia biondii HOM05D002721 ORTHO05D002919 1.7e-09 66.6 72 52.8
BcaNung01923 Brassica carinata HOM05D002721 ORTHO05D002919 2.3e-09 66.2 110 40.9
Dinv34891 Davidia involucrata HOM05D002721 ORTHO05D002919 2.3e-09 66.2 110 37.3
THA.LOC104805537 Tarenaya hassleriana HOM05D002721 ORTHO05D002919 2.3e-09 66.2 97 40.2
VMungo0464G2033 Vigna mungo HOM05D002721 ORTHO05D002919 2.3e-09 66.2 79 53.2
Phvul.004G045500 Phaseolus vulgaris HOM05D002721 ORTHO05D002919 3.0e-09 65.9 79 53.2
COL.COLO4_27771 Corchorus olitorius HOM05D002721 ORTHO05D002919 3.9e-09 65.5 127 38.6
Gohir.A13G091300 Gossypium hirsutum HOM05D002721 ORTHO05D002919 3.9e-09 65.5 79 53.2
Gohir.D13G086700 Gossypium hirsutum HOM05D002721 ORTHO05D002919 3.9e-09 65.5 79 53.2
Gorai.013G098800 Gossypium raimondii HOM05D002721 ORTHO05D002919 3.9e-09 65.5 79 53.2
Sabra17G0089400 Salix brachista HOM05D002721 ORTHO05D002919 3.9e-09 65.5 79 46.8
Hund16254 Selenicereus undatus HOM05D002721 ORTHO05D002919 3.9e-09 65.5 129 34.1
Actinidia26286 Actinidia chinensis HOM05D002721 ORTHO05D002919 5.1e-09 65.1 110 40.0
AUR62023133 Chenopodium quinoa HOM05D002721 ORTHO05D002919 6.6e-09 64.7 106 39.6
Haze_14356 Corylus avellana HOM05D002721 ORTHO05D002919 6.6e-09 64.7 118 39.0
Glyma.13G050900 Glycine max HOM05D002721 ORTHO05D002919 6.6e-09 64.7 78 52.6
Oeu033419.1 Olea europaea HOM05D002721 ORTHO05D002919 6.6e-09 64.7 76 55.3
PSO063G3792 Papaver somniferum HOM05D002721 ORTHO05D002919 6.6e-09 64.7 78 52.6
PSO782G5409 Papaver somniferum HOM05D002721 ORTHO05D002919 6.6e-09 64.7 78 52.6
Prupe.3G246700 Prunus persica HOM05D002721 ORTHO05D002919 6.6e-09 64.7 90 43.3
TPR.G15931 Trifolium pratense HOM05D002721 ORTHO05D002919 6.6e-09 64.7 127 38.6
TAR371G1157 Trochodendron aralioides HOM05D002721 ORTHO05D002919 8.6e-09 64.3 137 37.2
Thhalv10012837m.g Eutrema salsugineum HOM05D002721 ORTHO05D002919 1.1e-08 63.9 130 37.7
FAN09G1126 Fragaria x ananassa HOM05D002721 ORTHO05D002919 1.1e-08 63.9 77 53.2
Glyma.19G037700 Glycine max HOM05D002721 ORTHO05D002919 1.1e-08 63.9 110 42.7
MBI15_g42002_MAGBIO Magnolia biondii HOM05D002721 ORTHO05D002919 1.1e-08 63.9 77 49.4
TWI34G0100 Tripterygium wilfordii HOM05D002721 ORTHO05D002919 1.1e-08 63.9 78 47.4
Atru.chr11.1521 Acer truncatum HOM05D002721 ORTHO05D002919 1.5e-08 63.5 94 47.9
vmacro18116 Vaccinium macrocarpon HOM05D002721 ORTHO05D002919 1.5e-08 63.5 91 46.2
Potri.010G135900 Populus trichocarpa HOM05D002721 ORTHO05D002919 1.9e-08 63.2 79 50.6
Thecc.02G319900 Theobroma cacao HOM05D002721 ORTHO05D002919 1.9e-08 63.2 78 50.0
TAR629G3028 Trochodendron aralioides HOM05D002721 ORTHO05D002919 2.5e-08 62.8 118 37.3
Manes.06G078200 Manihot esculenta HOM05D002721 ORTHO05D002919 4.3e-08 62.0 137 34.3
Sed0019837 Sechium edule HOM05D002721 ORTHO05D002919 4.3e-08 62.0 109 38.5
TWI32G1231 Tripterygium wilfordii HOM05D002721 ORTHO05D002919 4.3e-08 62.0 72 45.8
Lj1g0012113 Lotus japonicus HOM05D002721 ORTHO05D002919 5.6e-08 61.6 103 37.9
HPP92_027783 Vanilla planifolia HOM05D002721 ORTHO05D002919 5.6e-08 61.6 77 48.1
CiPaw.03G080900 Carya illinoinensis HOM05D002721 ORTHO05D002919 9.5e-08 60.8 139 33.1
A10p26360 Brassica napus HOM05D002721 ORTHO05D002919 1.2e-07 60.5 79 49.4
BraA10t44693Z Brassica rapa HOM05D002721 ORTHO05D002919 1.2e-07 60.5 79 49.4
Cc11_g11350 Coffea canephora HOM05D002721 ORTHO05D002919 1.2e-07 60.5 94 44.7
Sabra10G0104500 Salix brachista HOM05D002721 ORTHO05D002919 1.2e-07 60.5 136 33.8
Ah.10g038340 Amaranthus hybridus HOM05D002721 ORTHO05D002919 1.6e-07 60.1 80 43.8
Migut.H00573 Erythranthe guttata HOM05D002721 ORTHO05D002919 1.6e-07 60.1 135 36.3
Os01g0235350 Oryza sativa ssp. japonica HOM05D002721 ORTHO05D002919 1.6e-07 60.1 72 48.6
Zm00001eb119020 Zea mays HOM05D002721 ORTHO05D002919 1.6e-07 60.1 72 48.6
Atru.chr8.683 Acer truncatum HOM05D002721 ORTHO05D002919 2.1e-07 59.7 110 37.3
BcaC08g46345 Brassica carinata HOM05D002721 ORTHO05D002919 2.1e-07 59.7 130 36.9
CiPaw.05G120200 Carya illinoinensis HOM05D002721 ORTHO05D002919 2.1e-07 59.7 79 46.8
Aa31sc12G170 Aethionema arabicum HOM05D002721 ORTHO05D002919 3.6e-07 58.9 125 35.2
A07p35320 Brassica napus HOM05D002721 ORTHO05D002919 3.6e-07 58.9 130 36.9
C06p40920 Brassica napus HOM05D002721 ORTHO05D002919 3.6e-07 58.9 130 36.9
BraA07t31125Z Brassica rapa HOM05D002721 ORTHO05D002919 3.6e-07 58.9 130 36.9
Medtr3g086660 Medicago truncatula HOM05D002721 ORTHO05D002919 3.6e-07 58.9 113 40.7
GSVIVG01010127001 Vitis vinifera HOM05D002721 ORTHO05D002919 3.6e-07 58.9 79 46.8
MSTRG.2964 Avicennia marina HOM05D002721 ORTHO05D002919 4.7e-07 58.5 78 51.3
BolC6t39341H Brassica oleracea HOM05D002721 ORTHO05D002919 4.7e-07 58.5 122 38.5
Cpa.g.sc570.3 Carica papaya HOM05D002721 ORTHO05D002919 4.7e-07 58.5 123 35.8
Os05g0241000 Oryza sativa ssp. japonica HOM05D002721 ORTHO05D002919 4.7e-07 58.5 78 44.9
Sc10g0000490 Simmondsia chinensis HOM05D002721 ORTHO05D002919 4.7e-07 58.5 131 34.4
Ciclev10031372m.g Citrus clementina HOM05D002721 ORTHO05D002919 6.2e-07 58.2 78 51.3
Lsat_1_v5_gn_2_86020 Lactuca sativa HOM05D002721 ORTHO05D002919 6.2e-07 58.2 77 45.5
Oeu024143.1 Olea europaea HOM05D002721 ORTHO05D002919 6.2e-07 58.2 78 46.2
Carub.0002s1555 Capsella rubella HOM05D002721 ORTHO05D002919 8.1e-07 57.8 132 34.1
ClCG07G016160 Citrullus lanatus HOM05D002721 ORTHO05D002919 8.1e-07 57.8 75 48.0
BolC6t39336H Brassica oleracea HOM05D002721 ORTHO05D002919 1.1e-06 57.4 122 37.7
Haze_11843 Corylus avellana HOM05D002721 ORTHO05D002919 1.1e-06 57.4 79 46.8
vmacro10459 Vaccinium macrocarpon HOM05D002721 ORTHO05D002919 1.1e-06 57.4 94 43.6
Hma1.2p1_1348F.1_g277310 Hydrangea macrophylla HOM05D002721 ORTHO05D002919 1.4e-06 57.0 133 33.8
BcaC08g46344 Brassica carinata HOM05D002721 ORTHO05D002919 1.8e-06 56.6 128 35.2
Cpa.g.sc1414.2 Carica papaya HOM05D002721 ORTHO05D002919 1.8e-06 56.6 94 40.4
SalBow1G0101 Salvia bowleyana HOM05D002721 ORTHO05D002919 1.8e-06 56.6 42 71.4
BcaB03g15864 Brassica carinata HOM05D002721 ORTHO05D002919 2.4e-06 56.2 71 46.5
BcaB05g24431 Brassica carinata HOM05D002721 ORTHO05D002919 2.4e-06 56.2 85 47.1
CARHR061780 Cardamine hirsuta HOM05D002721 ORTHO05D002919 2.4e-06 56.2 78 43.6
AT1G68910 Arabidopsis thaliana HOM05D002721 ORTHO05D002919 4.0e-06 55.5 53 58.5
Dinv15572 Davidia involucrata HOM05D002721 ORTHO05D002919 4.0e-06 55.5 81 44.4
Nn7g36612 Nelumbo nucifera HOM05D002721 ORTHO05D002919 4.0e-06 55.5 116 37.1
Actinidia13414 Actinidia chinensis HOM05D002721 ORTHO05D002919 5.2e-06 55.1 69 50.7
BolC2t08623H Brassica oleracea HOM05D002721 ORTHO05D002919 6.8e-06 54.7 71 43.7
Lj6A772G33 Lonicera japonica HOM05D002721 ORTHO05D002919 6.8e-06 54.7 133 34.6
Rhsim09G0119600 Rhododendron simsii HOM05D002721 ORTHO05D002919 8.9e-06 54.3 69 49.3
SGA_v2.0_scaffold287G47209 Striga asiatica HOM05D002721 ORTHO05D002919 8.9e-06 54.3 94 39.4


User provided reference genes

Program Settings