Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18996 Striga asiatica HOM05D002281 ORTHO05D005599 0.0e+00 2402.9 1214 100.0
SalBow7G0462 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2193.7 1214 89.5
Migut.C01166 Erythranthe guttata HOM05D002281 ORTHO05D005599 0.0e+00 2177.9 1214 89.5
SalBow7G2659 Salvia bowleyana HOM05D002281 ORTHO05D005599 0.0e+00 2171.0 1214 89.0
MSTRG.1472 Avicennia marina HOM05D002281 ORTHO05D005599 0.0e+00 2162.1 1215 88.7
CSS0028465 Camellia sinensis var. sinensis HOM05D002281 ORTHO05D005599 0.0e+00 2095.1 1213 85.6
Dinv05786 Davidia involucrata HOM05D002281 ORTHO05D005599 0.0e+00 2089.7 1215 85.3
Solyc11g013280.1 Solanum lycopersicum HOM05D002281 ORTHO05D005599 0.0e+00 2080.8 1215 84.1
Sopen11g008300 Solanum pennellii HOM05D002281 ORTHO05D005599 0.0e+00 2064.7 1215 83.9
Gorai.013G119000 Gossypium raimondii HOM05D002281 ORTHO05D005599 0.0e+00 2060.8 1213 83.5
Gohir.A13G102900 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2060.4 1213 83.5
Gohir.D13G106101 Gossypium hirsutum HOM05D002281 ORTHO05D005599 0.0e+00 2057.0 1213 83.3
Thecc.05G264800 Theobroma cacao HOM05D002281 ORTHO05D005599 0.0e+00 2055.4 1213 83.3
Cfa006304 Carpinus fangiana HOM05D002281 ORTHO05D005599 0.0e+00 2049.2 1215 83.2
Potri.019G025200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2049.2 1213 83.2
CANSAT54G0020 Cannabis sativa HOM05D002281 ORTHO05D005599 0.0e+00 2045.8 1214 83.6
GSVIVG01026355001 Vitis vinifera HOM05D002281 ORTHO05D005599 0.0e+00 2043.5 1227 83.2
ECA233G3880 Erigeron canadensis HOM05D002281 ORTHO05D005599 0.0e+00 2038.1 1212 82.6
FvH4_6g01330 Fragaria vesca HOM05D002281 ORTHO05D005599 0.0e+00 2036.5 1213 82.9
Manes.09G145500 Manihot esculenta HOM05D002281 ORTHO05D005599 0.0e+00 2032.3 1213 82.7
Atru.chr2.1138 Acer truncatum HOM05D002281 ORTHO05D005599 0.0e+00 2031.5 1213 83.2
Prupe.6G354800 Prunus persica HOM05D002281 ORTHO05D005599 0.0e+00 2030.0 1213 82.9
TWI60G0078 Tripterygium wilfordii HOM05D002281 ORTHO05D005599 0.0e+00 2028.8 1214 82.1
FAN14G5004 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2024.6 1216 82.6
FAN09G1447 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2023.8 1213 82.6
CiPaw.07G076600 Carya illinoinensis HOM05D002281 ORTHO05D005599 0.0e+00 2022.7 1215 82.6
HanXRQChr04g0111671 Helianthus annuus HOM05D002281 ORTHO05D005599 0.0e+00 2018.8 1228 81.2
FAN05G1240 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 2017.3 1226 81.7
PGR142G2635 Punica granatum HOM05D002281 ORTHO05D005599 0.0e+00 2014.2 1213 81.7
Duzib106G1897 Durio zibethinus HOM05D002281 ORTHO05D005599 0.0e+00 2013.8 1213 82.1
Hma1.2p1_0153F.1_g067890 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 2010.0 1220 81.9
Potri.013G051200 Populus trichocarpa HOM05D002281 ORTHO05D005599 0.0e+00 2009.2 1213 81.9
Eucgr.B02169 Eucalyptus grandis HOM05D002281 ORTHO05D005599 0.0e+00 2008.4 1220 81.9
Nitab4.5_0000494g0100 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 2008.0 1215 81.6
Lj1g0020458 Lotus japonicus HOM05D002281 ORTHO05D005599 0.0e+00 2007.6 1215 81.7
Glyma.03G253000 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2007.3 1213 82.1
Glyma.19G250600 Glycine max HOM05D002281 ORTHO05D005599 0.0e+00 2006.9 1213 81.9
TAR362G0445 Trochodendron aralioides HOM05D002281 ORTHO05D005599 0.0e+00 2006.5 1213 82.3
Phvul.006G107600 Phaseolus vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 2003.0 1215 81.8
arahy.Tifrunner.gnm1.ann1.KCE1UK Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 1998.0 1250 80.2
Medtr7g116590 Medicago truncatula HOM05D002281 ORTHO05D005599 0.0e+00 1995.7 1221 81.2
Sabra19G0037800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 1995.3 1229 81.1
VMungo0540G0745 Vigna mungo HOM05D002281 ORTHO05D005599 0.0e+00 1993.8 1215 81.2
Lsat_1_v5_gn_8_2941 Lactuca sativa HOM05D002281 ORTHO05D005599 0.0e+00 1991.5 1214 81.1
Sabra19G0034800 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 1991.1 1229 80.9
Cc10_g10590 Coffea canephora HOM05D002281 ORTHO05D005599 0.0e+00 1986.1 1174 83.0
Aqoxy5G01434 Aquilegia oxysepala HOM05D002281 ORTHO05D005599 0.0e+00 1984.1 1215 80.7
Carub.0006s1667 Capsella rubella HOM05D002281 ORTHO05D005599 0.0e+00 1981.5 1214 80.5
THA.LOC104820753 Tarenaya hassleriana HOM05D002281 ORTHO05D005599 0.0e+00 1977.6 1213 80.4
AT5G18410 Arabidopsis thaliana HOM05D002281 ORTHO05D005599 0.0e+00 1976.8 1214 80.2
Thhalv10012457m.g Eutrema salsugineum HOM05D002281 ORTHO05D005599 0.0e+00 1976.1 1212 80.4
CARHR194610 Cardamine hirsuta HOM05D002281 ORTHO05D005599 0.0e+00 1975.3 1212 80.1
Nitab4.5_0000051g0330 Nicotiana tabacum HOM05D002281 ORTHO05D005599 0.0e+00 1967.6 1327 75.4
Sed0017844 Sechium edule HOM05D002281 ORTHO05D005599 0.0e+00 1967.6 1223 80.0
AL6G29660 Arabidopsis lyrata HOM05D002281 ORTHO05D005599 0.0e+00 1964.5 1218 79.8
BolC3t13512H Brassica oleracea HOM05D002281 ORTHO05D005599 0.0e+00 1964.1 1221 79.4
A03p08830 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 1963.7 1219 79.4
Sc09g0001770 Simmondsia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1959.9 1212 79.5
C03p10320 Brassica napus HOM05D002281 ORTHO05D005599 0.0e+00 1958.7 1219 79.2
BraA03t10208Z Brassica rapa HOM05D002281 ORTHO05D005599 0.0e+00 1952.6 1224 78.9
Nn1g03089 Nelumbo nucifera HOM05D002281 ORTHO05D005599 0.0e+00 1948.7 1211 79.8
Ciclev10023801m.g Citrus clementina HOM05D002281 ORTHO05D005599 0.0e+00 1944.9 1221 79.9
arahy.Tifrunner.gnm1.ann1.T4Q4MP Arachis hypogaea HOM05D002281 ORTHO05D005599 0.0e+00 1942.9 1218 80.0
PSO674G0074 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 1936.8 1214 78.6
Ca_09474_v3 Cicer arietinum L. HOM05D002281 ORTHO05D005599 0.0e+00 1934.1 1239 78.5
COL.COLO4_38179 Corchorus olitorius HOM05D002281 ORTHO05D005599 0.0e+00 1926.8 1213 78.6
Sp6g25910 Schrenkiella parvula HOM05D002281 ORTHO05D005599 0.0e+00 1926.8 1215 78.8
PSO170G6144 Papaver somniferum HOM05D002281 ORTHO05D005599 0.0e+00 1922.1 1214 78.0
Hund07164 Selenicereus undatus HOM05D002281 ORTHO05D005599 0.0e+00 1918.7 1220 77.8
FAN05G1274 Fragaria x ananassa HOM05D002281 ORTHO05D005599 0.0e+00 1918.3 1215 79.3
EL10Ac4g09788 Beta vulgaris HOM05D002281 ORTHO05D005599 0.0e+00 1911.0 1212 78.2
Haze_04485 Corylus avellana HOM05D002281 ORTHO05D005599 0.0e+00 1895.9 1235 77.6
BcaB01g05191 Brassica carinata HOM05D002281 ORTHO05D005599 0.0e+00 1877.8 1225 76.5
Os03g0143800 Oryza sativa ssp. japonica HOM05D002281 ORTHO05D005599 0.0e+00 1802.3 1215 73.7
Sabra13G0046600 Salix brachista HOM05D002281 ORTHO05D005599 0.0e+00 1782.7 1474 64.7
Aa31LG11G11220 Aethionema arabicum HOM05D002281 ORTHO05D005599 0.0e+00 1766.5 1215 74.2
Zm00001eb003550 Zea mays HOM05D002281 ORTHO05D005599 0.0e+00 1766.1 1216 72.0
AUR62000642 Chenopodium quinoa HOM05D002281 ORTHO05D005599 0.0e+00 1642.9 1229 69.7
Cpa.g.sc51.37 Carica papaya HOM05D002281 ORTHO05D005599 0.0e+00 1559.7 929 83.4
unitig_736.g22260 Utricularia gibba HOM05D002281 ORTHO05D005599 0.0e+00 1552.3 1109 72.2
RcHm_v2.0_Chr3g0448901 Rosa chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1541.6 940 80.4
Actinidia03823 Actinidia chinensis HOM05D002281 ORTHO05D005599 0.0e+00 1508.8 909 81.1
Psat0s3583g0040 Pisum sativum HOM05D002281 ORTHO05D005599 0.0e+00 1491.9 881 83.4
HPP92_013019 Vanilla planifolia HOM05D002281 ORTHO05D005599 0.0e+00 1491.9 1209 62.9
MELO3C015463.2 Cucumis melo HOM05D002281 ORTHO05D005599 0.0e+00 1473.8 937 77.6
Rhsim05G0168900 Rhododendron simsii HOM05D002281 ORTHO05D005599 0.0e+00 1463.4 996 74.7
Lalb_Chr18g0044201 Lupinus albus HOM05D002281 ORTHO05D005599 0.0e+00 1454.1 912 78.3
Peaxi162Scf00285g00226 Petunia axillaris HOM05D002281 ORTHO05D005599 0.0e+00 1449.1 911 78.2
CsaV3_1G040360 Cucumis sativus L. HOM05D002281 ORTHO05D005599 0.0e+00 1426.4 911 77.3
ClCG03G011410 Citrullus lanatus HOM05D002281 ORTHO05D005599 0.0e+00 1422.9 910 76.8
AagrBONN_evm.TU.Sc2ySwM_344.4016 Anthoceros agrestis HOM05D002281 ORTHO05D005599 0.0e+00 1412.1 1219 58.8
Mapoly0078s0045 Marchantia polymorpha HOM05D002281 ORTHO05D005599 0.0e+00 1407.9 1215 58.5
Pp3c21_8020 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1391.3 1252 56.0
MD12G1252900 Malus domestica HOM05D002281 ORTHO05D005599 0.0e+00 1377.5 846 80.0
SMO348G0052 Selaginella moellendorffii HOM05D002281 ORTHO05D005599 0.0e+00 1374.0 1222 57.0
DCAR_005524 Daucus carota HOM05D002281 ORTHO05D005599 0.0e+00 1352.0 954 72.4
ATR0787G096 Amborella trichopoda HOM05D002281 ORTHO05D005599 0.0e+00 1256.1 917 68.3
Pp3c2_6040 Physcomitrium patens HOM05D002281 ORTHO05D005599 0.0e+00 1238.4 1235 51.5
Hma1.2p1_0153F.1_g067920 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 0.0e+00 1130.5 687 81.5
CAN.G61.7 Capsicum annuum HOM05D002281 ORTHO05D005599 1.6e-260 903.7 803 60.3
Ah.06g188740 Amaranthus hybridus HOM05D002281 ORTHO05D005599 2.1e-241 840.1 828 55.8
Lj2A49T37 Lonicera japonica HOM05D002281 ORTHO05D005599 7.1e-237 825.1 476 85.9
SHI14430 Sapria himalayana HOM05D002281 ORTHO05D005599 2.0e-199 700.7 547 65.8
AUR62006997 Chenopodium quinoa HOM05D002281 ORTHO05D005599 2.3e-179 634.0 426 75.4
MD12G1252700 Malus domestica HOM05D002281 ORTHO05D005599 2.6e-170 604.0 378 81.0
CDE01G0796 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.1e-160 572.0 450 65.6
SEGI_41506 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 9.5e-157 558.9 390 70.3
CDE01G0576 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 1.9e-149 534.6 381 69.6
Psat0s2603g0080 Pisum sativum HOM05D002281 ORTHO05D005599 1.4e-144 518.5 336 76.2
Actinidia03824 Actinidia chinensis HOM05D002281 ORTHO05D005599 3.5e-143 513.8 274 94.2
Peaxi162Scf00285g00225 Petunia axillaris HOM05D002281 ORTHO05D005599 7.8e-143 512.7 274 94.2
RcHm_v2.0_Chr3g0448911 Rosa chinensis HOM05D002281 ORTHO05D005599 1.1e-141 508.8 274 93.1
CAN.G61.6 Capsicum annuum HOM05D002281 ORTHO05D005599 4.3e-141 506.9 274 93.4
CBR_g23328 Chara braunii HOM05D002281 ORTHO05D005599 4.4e-138 496.9 577 44.5
Lalb_Chr18g0044191 Lupinus albus HOM05D002281 ORTHO05D005599 4.9e-137 493.4 274 90.1
ATR0787G220 Amborella trichopoda HOM05D002281 ORTHO05D005599 9.5e-133 479.2 274 87.6
vmacro19963 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 4.0e-131 473.8 347 73.5
DCAR_005525 Daucus carota HOM05D002281 ORTHO05D005599 5.8e-130 469.9 261 90.0
Cpa.g.sc51.41 Carica papaya HOM05D002281 ORTHO05D005599 1.3e-126 458.8 303 75.2
ClCG03G011400 Citrullus lanatus HOM05D002281 ORTHO05D005599 3.3e-125 454.1 274 84.3
CsaV3_1G040370 Cucumis sativus L. HOM05D002281 ORTHO05D005599 1.1e-120 439.1 274 82.1
CAN.G61.8 Capsicum annuum HOM05D002281 ORTHO05D005599 7.8e-119 433.0 410 57.3
HPP92_013016 Vanilla planifolia HOM05D002281 ORTHO05D005599 5.1e-118 430.3 302 67.5
Haze_04492 Corylus avellana HOM05D002281 ORTHO05D005599 4.3e-117 427.2 274 81.8
Lj2A49G34 Lonicera japonica HOM05D002281 ORTHO05D005599 9.0e-115 419.5 244 84.4
arahy.Tifrunner.gnm1.ann1.I7KFZB Arachis hypogaea HOM05D002281 ORTHO05D005599 3.9e-86 324.3 222 78.4
SEGI_00068 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 7.2e-80 303.5 265 60.8
HPP92_013015 Vanilla planifolia HOM05D002281 ORTHO05D005599 6.1e-79 300.4 274 58.8
FAN14G3852 Fragaria x ananassa HOM05D002281 ORTHO05D006774 8.8e-78 296.6 205 76.1
CBR_g23326 Chara braunii HOM05D002281 ORTHO05D005599 3.0e-70 271.6 470 33.8
vmacro19965 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 9.7e-69 266.5 167 77.8
SHI14432 Sapria himalayana HOM05D002281 ORTHO05D005599 9.4e-56 223.4 142 73.2
vmacro19966 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 6.1e-55 220.7 423 37.6
Lj2A50T26 Lonicera japonica HOM05D002281 ORTHO05D005599 1.2e-53 216.5 134 80.6
Lj2A49T38 Lonicera japonica HOM05D002281 ORTHO05D005599 2.2e-52 212.2 119 83.2
Lj2A49G35 Lonicera japonica HOM05D002281 ORTHO05D005599 9.5e-48 196.8 127 73.2
CDE02G3044 Ceratophyllum demersum HOM05D002281 ORTHO05D005599 8.6e-41 173.7 127 67.7
CBR_g74560 Chara braunii HOM05D002281 ORTHO05D005599 2.1e-39 169.1 161 51.6
Hma1.2p1_0153F.1_g067900 Hydrangea macrophylla HOM05D002281 ORTHO05D005599 3.4e-37 161.8 81 97.5
BraA03t10210Z Brassica rapa HOM05D002281 ORTHO05D005599 1.4e-35 156.4 114 71.1
SEGI_02952 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.9e-35 156.0 113 66.4
Ah.06g188770 Amaranthus hybridus HOM05D002281 ORTHO05D005599 1.2e-34 153.3 79 92.4
FAN14G5351 Fragaria x ananassa HOM05D002281 ORTHO05D006774 2.7e-34 152.1 128 65.6
Gorai.007G272700 Gossypium raimondii HOM05D002281 ORTHO05D005599 6.0e-34 151.0 101 71.3
Gohir.D11G253675 Gossypium hirsutum HOM05D002281 ORTHO05D005599 3.9e-33 148.3 101 70.3
A03p08860 Brassica napus HOM05D002281 ORTHO05D005599 8.0e-31 140.6 114 64.9
SEGI_33538 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 1.1e-30 140.2 95 67.4
SEGI_28731 Sequoiadendron giganteum HOM05D002281 ORTHO05D005599 5.4e-27 127.9 85 67.1
Nn6g32299 Nelumbo nucifera HOM05D002281 ORTHO05D005599 4.3e-24 118.2 73 74.0
Gohir.D11G253550 Gossypium hirsutum HOM05D002281 ORTHO05D005599 2.1e-23 115.9 70 80.0
Gorai.007G272500 Gossypium raimondii HOM05D002281 ORTHO05D005599 2.1e-23 115.9 70 78.6
Cc10_g10600 Coffea canephora HOM05D002281 ORTHO05D005599 3.4e-21 108.6 57 93.0
Gohir.A11G244201 Gossypium hirsutum HOM05D002281 ORTHO05D005599 3.7e-20 105.1 70 71.4
HPP92_013017 Vanilla planifolia HOM05D002281 ORTHO05D005599 2.1e-15 89.4 58 70.7
Ah.06g188760 Amaranthus hybridus HOM05D002281 ORTHO05D006774 6.6e-09 67.8 142 35.2
vmacro19964 Vaccinium macrocarpon HOM05D002281 ORTHO05D005599 1.5e-08 66.6 34 85.3


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