Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 1.5e-94 349.7 210 100.0
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 4.9e-53 211.8 207 67.6
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.4e-41 171.4 212 58.0
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 6.5e-37 158.3 180 58.9
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 5.5e-36 155.2 180 57.8
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 3.0e-18 96.3 160 50.0
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 2.0e-17 93.6 206 41.3
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 5.7e-17 92.0 144 50.7
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.3e-16 90.9 178 32.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 3.7e-16 89.4 145 48.3
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 3.7e-16 89.4 157 47.8
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 8.2e-16 88.2 147 55.8
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 2.4e-15 86.7 218 38.5
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.5e-14 84.0 156 44.2
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.9e-14 82.0 156 43.6
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 5.9e-14 82.0 185 42.7
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 1.3e-13 80.9 198 40.9
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.3e-13 80.9 175 40.0
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 6.5e-13 78.6 161 42.2
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 6.5e-13 78.6 172 36.6
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.1e-12 77.8 142 46.5
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.9e-12 77.0 183 40.4
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 1.9e-12 77.0 135 45.9
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 1.9e-12 77.0 149 39.6
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 1.9e-12 77.0 153 39.9
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 2.5e-12 76.6 144 31.9
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 2.5e-12 76.6 122 51.6
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 3.2e-12 76.3 106 62.3
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.2e-12 75.9 183 39.9
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 5.5e-12 75.5 158 44.3
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 5.5e-12 75.5 135 50.4
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 5.5e-12 75.5 197 36.0
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 7.2e-12 75.1 200 37.0
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 7.2e-12 75.1 144 38.9
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 9.4e-12 74.7 149 45.0
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 9.4e-12 74.7 119 49.6
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 9.4e-12 74.7 168 43.5
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.2e-11 74.3 122 50.8
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.6e-11 73.9 144 43.8
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 2.1e-11 73.6 150 46.0
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 2.1e-11 73.6 144 30.6
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 2.7e-11 73.2 133 48.9
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.6e-11 72.8 183 39.3
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 3.6e-11 72.8 140 47.1
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 3.6e-11 72.8 129 47.3
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 4.7e-11 72.4 132 31.1
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 4.7e-11 72.4 132 31.1
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 4.7e-11 72.4 107 50.5
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 7.9e-11 71.6 147 44.2
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.4e-10 70.9 175 42.3
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 1.4e-10 70.9 135 47.4
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.4e-10 70.9 132 49.2
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 1.1e-09 67.8 138 50.0
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 1.5e-09 67.4 120 50.0
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 2.0e-09 67.0 151 37.7
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.6e-09 66.6 121 47.1
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 2.6e-09 66.6 149 41.6
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 4.4e-09 65.9 152 42.1
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 7.4e-09 65.1 153 30.1
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 9.7e-09 64.7 171 40.9
Thecc.08G100800 Theobroma cacao HOM05D004728 ORTHO05D002375 9.7e-09 64.7 83 61.4
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 1.3e-08 64.3 146 28.1
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 1.7e-08 63.9 162 43.2
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 1.7e-08 63.9 167 38.3
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.2e-08 63.5 141 42.6
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 3.7e-08 62.8 126 46.8
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 6.3e-08 62.0 156 40.4
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 6.3e-08 62.0 148 41.9
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 8.2e-08 61.6 170 37.1
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.4e-07 60.8 140 39.3
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.4e-07 60.8 127 43.3
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.8e-07 60.5 121 43.0
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 2.4e-07 60.1 101 51.5
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 2.4e-07 60.1 134 35.1
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 2.4e-07 60.1 203 38.9
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 2.4e-07 60.1 120 27.5
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.1e-07 59.7 147 39.5
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 4.1e-07 59.3 130 43.8
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 4.1e-07 59.3 113 48.7
Gohir.D05G225700 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.3e-07 58.9 100 52.0
Lalb_Chr17g0344311 Lupinus albus HOM05D012119 ORTHO05D002375 5.3e-07 58.9 62 40.3
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 5.3e-07 58.9 209 34.0
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 9.1e-07 58.2 143 42.7
Nitab4.5_0007108g0040 Nicotiana tabacum HOM05D021150 ORTHO05D002375 1.2e-06 57.8 98 55.1
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 1.5e-06 57.4 131 39.7
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.5e-06 57.4 136 36.0
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 2.0e-06 57.0 131 40.5
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 3.5e-06 56.2 131 28.2
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 3.5e-06 56.2 104 45.2
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 4.5e-06 55.8 150 40.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.5e-06 55.8 134 41.0
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 7.7e-06 55.1 135 36.3
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 7.7e-06 55.1 131 38.2
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 7.7e-06 55.1 63 42.9


User provided reference genes

Program Settings