Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 1.1e-305 1052.7 633 100.0
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 2.5e-161 573.2 651 59.3
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 5.3e-159 565.5 643 56.6
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 2.2e-157 560.1 655 54.0
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 3.0e-154 549.7 613 59.5
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 8.2e-152 541.6 652 53.2
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 1.6e-147 527.3 661 52.2
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 8.2e-144 515.0 646 51.5
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 4.1e-143 512.7 659 58.3
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 9.0e-143 511.5 660 51.4
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 7.7e-142 508.4 644 52.0
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 1.8e-138 497.3 644 53.1
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 5.1e-138 495.7 650 50.9
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 2.6e-137 493.4 650 49.8
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 1.7e-133 480.7 669 47.8
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 2.2e-133 480.3 635 49.3
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 1.0e-130 471.5 672 48.7
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 1.4e-127 461.1 635 51.3
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 1.2e-126 458.0 700 46.6
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 2.0e-126 457.2 642 48.8
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 3.5e-126 456.4 518 54.1
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 5.9e-126 455.7 706 47.5
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 1.7e-125 454.1 584 53.9
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 3.2e-124 449.9 677 44.6
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 5.5e-124 449.1 676 46.9
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 5.5e-124 449.1 642 49.7
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 1.2e-123 448.0 710 46.9
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 2.1e-123 447.2 685 45.8
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 6.1e-123 445.7 689 47.5
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 6.1e-123 445.7 662 47.1
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 8.0e-123 445.3 641 49.9
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 2.3e-122 443.7 648 45.2
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 2.3e-122 443.7 666 45.8
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 3.0e-122 443.4 694 46.4
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 3.0e-122 443.4 656 45.6
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 2.0e-121 440.7 596 47.1
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 2.8e-120 436.8 694 47.6
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 3.1e-119 433.3 652 47.4
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 9.1e-119 431.8 653 47.6
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 1.0e-117 428.3 695 43.3
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 1.3e-117 427.9 532 54.5
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 7.2e-116 422.2 673 45.3
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 7.2e-116 422.2 610 45.4
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 9.4e-116 421.8 698 45.6
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 2.1e-115 420.6 646 50.3
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 2.1e-115 420.6 673 43.4
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 2.7e-115 420.2 673 46.8
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 2.3e-114 417.2 651 49.8
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.3e-112 411.4 662 46.5
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 1.7e-112 411.0 640 48.1
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 4.8e-112 409.5 650 43.1
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 1.1e-111 408.3 643 45.4
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 7.0e-111 405.6 681 45.1
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 7.0e-111 405.6 677 45.2
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 9.1e-111 405.2 646 47.2
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 2.9e-109 400.2 646 44.6
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 6.1e-107 392.5 689 40.6
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 1.4e-106 391.3 688 42.3
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 3.0e-106 390.2 676 42.8
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 3.4e-105 386.7 682 43.8
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 2.8e-104 383.6 557 51.3
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 2.4e-103 380.6 668 46.1
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 7.0e-103 379.0 686 43.0
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 2.7e-102 377.1 651 45.8
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 1.7e-101 374.4 674 42.3
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.1e-99 367.5 623 46.7
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 3.0e-98 363.6 689 43.5
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 2.6e-97 360.5 635 44.4
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 2.2e-96 357.5 596 41.9
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 1.1e-95 355.1 654 44.8
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 3.2e-95 353.6 717 39.5
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 4.6e-94 349.7 602 44.4
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 3.0e-93 347.1 669 42.3
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 3.3e-92 343.6 695 40.9
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 5.6e-92 342.8 682 42.2
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 4.0e-90 336.7 676 43.8
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 5.2e-90 336.3 682 39.7
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 4.4e-89 333.2 666 42.0
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 2.9e-88 330.5 465 52.3
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 8.3e-88 328.9 567 45.7
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 4.1e-87 326.6 695 39.6
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 1.2e-86 325.1 671 40.8
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 4.6e-86 323.2 640 42.5
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 1.9e-84 317.8 583 41.0
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 9.5e-84 315.5 673 41.8
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 1.4e-82 311.6 677 39.6
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 1.4e-82 311.6 430 52.3
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 4.0e-82 310.1 723 38.9
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 8.9e-82 308.9 651 39.8
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 2.0e-81 307.8 680 40.3
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 2.6e-81 307.4 603 42.0
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 2.9e-80 303.9 566 42.9
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 6.4e-80 302.8 680 39.6
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 1.7e-77 294.7 308 55.8
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 2.5e-76 290.8 481 44.5
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 2.8e-75 287.3 641 39.0
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 4.7e-75 286.6 656 38.3
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 4.7e-75 286.6 657 35.3
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 6.2e-75 286.2 418 51.0
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.3e-74 284.3 597 40.9
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 2.9e-72 277.3 554 41.3
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 7.8e-70 269.2 649 38.1
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 7.3e-68 262.7 647 40.3
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 5.2e-66 256.5 649 39.8
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 6.9e-66 256.1 649 39.6
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 8.9e-66 255.8 657 39.0
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 1.5e-65 255.0 649 39.9
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-61 241.9 470 39.8
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 5.6e-60 236.5 643 33.9
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 5.8e-57 226.5 286 52.1
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 1.6e-54 218.4 315 51.1
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 1.6e-51 208.4 372 46.2
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 6.2e-51 206.5 636 35.7
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 1.8e-50 204.9 580 37.4
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 2.2e-48 198.0 273 46.9
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 1.0e-45 189.1 158 63.3
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 1.1e-42 179.1 675 34.7
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 1.7e-40 171.8 619 34.9
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 6.5e-40 169.9 172 57.0
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 1.8e-34 151.8 235 46.4
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 8.5e-32 142.9 618 32.0
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 4.2e-31 140.6 604 28.0
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 2.4e-26 124.8 339 35.4
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 5.3e-26 123.6 125 56.0
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 2.9e-24 117.9 113 55.8
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.4e-21 109.0 625 30.4
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 8.2e-19 99.8 95 57.9
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 1.4e-15 89.0 533 30.2
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 7.2e-15 86.7 183 38.8
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 9.4e-15 86.3 126 46.8
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 2.1e-14 85.1 126 46.0
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 3.0e-13 81.3 126 45.2
MD04G1246500 Malus domestica HOM05D005724 ORTHO05D006636 1.3e-08 65.9 125 38.4
Nitab4.5_0005621g0100 Nicotiana tabacum HOM05D005724 ORTHO05D006636 9.4e-07 59.7 111 39.6


User provided reference genes

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