Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 1.6e-230 802.4 386 100.0
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 7.0e-146 521.2 409 63.1
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 2.6e-145 519.2 405 64.2
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 2.2e-136 489.6 416 60.1
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 3.0e-133 479.2 416 59.6
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 1.1e-101 374.4 459 43.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.0e-100 370.2 400 48.2
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 3.2e-98 362.8 430 44.7
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 1.2e-97 360.9 434 44.2
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 2.1e-97 360.1 409 45.2
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 2.1e-97 360.1 430 45.1
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 4.6e-97 359.0 423 45.2
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 4.6e-97 359.0 407 47.4
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 4.6e-97 359.0 439 45.8
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 7.8e-97 358.2 422 44.3
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 3.0e-96 356.3 425 43.5
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 3.0e-96 356.3 419 45.1
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 4.3e-95 352.4 432 44.7
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 8.1e-94 348.2 406 43.3
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 1.2e-92 344.4 428 43.2
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 3.4e-92 342.8 432 43.5
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 4.4e-92 342.4 427 42.9
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 1.4e-90 337.4 428 44.6
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 2.7e-89 333.2 403 43.7
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 7.8e-89 331.6 407 42.5
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 7.8e-89 331.6 456 42.1
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 5.1e-88 328.9 434 42.2
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.5e-87 327.4 430 41.6
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 7.3e-87 325.1 438 41.6
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 1.2e-86 324.3 434 41.9
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.6e-86 323.9 430 40.9
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 2.8e-86 323.2 402 43.8
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 3.6e-86 322.8 429 40.6
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 1.4e-85 320.9 430 41.4
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 5.2e-85 318.9 425 40.5
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 2.6e-84 316.6 403 42.4
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 4.4e-84 315.8 419 42.2
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 1.3e-83 314.3 452 39.6
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 1.7e-83 313.9 426 41.3
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 1.7e-83 313.9 410 42.9
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 8.4e-83 311.6 439 40.1
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 1.1e-82 311.2 439 39.0
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.4e-82 310.8 429 38.7
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 3.2e-82 309.7 506 37.4
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 3.2e-82 309.7 434 39.4
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 1.6e-81 307.4 431 39.9
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 4.6e-81 305.8 370 45.7
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 5.1e-80 302.4 414 41.8
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 5.6e-79 298.9 367 43.9
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 2.8e-78 296.6 435 38.2
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 1.1e-77 294.7 433 37.9
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 2.6e-76 290.0 435 37.7
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.3e-75 287.7 310 47.4
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 1.3e-75 287.7 431 38.7
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 1.8e-72 277.3 404 38.6
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 4.0e-69 266.2 318 42.8
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 1.4e-66 257.7 331 45.3
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 5.5e-66 255.8 406 37.4
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 3.5e-65 253.1 426 36.4
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.9e-63 247.3 380 37.6
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 9.6e-63 245.0 403 35.0
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 4.8e-62 242.7 273 45.1
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 6.9e-61 238.8 314 41.4
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 2.2e-59 233.8 315 40.6
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 6.5e-59 232.3 286 42.7
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.3e-56 224.6 369 36.6
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 3.2e-50 203.4 218 49.5
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 1.7e-46 191.0 389 33.4
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 3.7e-46 189.9 421 30.4
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 6.5e-43 179.1 275 37.8
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 4.8e-38 162.9 213 41.3
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 5.9e-36 156.0 199 43.7
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 1.4e-32 144.8 162 46.3
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 1.8e-32 144.4 261 32.2
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 1.3e-30 138.3 256 32.0
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 3.6e-25 120.2 197 38.1
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.0e-24 118.6 283 30.4
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 6.7e-24 115.9 79 64.6
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.3e-19 101.7 154 39.0
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 4.2e-18 96.7 72 56.9
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 2.7e-17 94.0 79 55.7
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 1.8e-13 81.3 130 33.8
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 1.1e-10 72.0 186 28.5
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 4.7e-09 66.6 36 80.6
Lsat_1_v5_gn_1_21640 Lactuca sativa HOM05D001068 ORTHO05D002190 1.3e-06 58.5 40 62.5


User provided reference genes

Program Settings