Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 7.8e-95 350.5 185 100.0
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 5.8e-58 228.0 156 75.0
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.0e-57 227.3 156 74.4
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.2e-55 220.3 156 72.4
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 2.8e-52 209.1 156 69.9
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 2.2e-41 172.9 156 59.6
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 2.9e-41 172.6 156 58.3
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 8.5e-41 171.0 166 54.8
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.4e-40 170.2 116 74.1
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 1.9e-40 169.9 146 59.6
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 2.5e-40 169.5 156 57.7
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 2.5e-40 169.5 157 55.4
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 2.5e-40 169.5 206 50.0
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 4.2e-40 168.7 145 58.6
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 2.7e-39 166.0 156 58.3
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.7e-39 166.0 156 57.1
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 2.7e-39 166.0 151 57.0
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 2.7e-39 166.0 147 59.9
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 4.6e-39 165.2 140 60.7
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 6.1e-39 164.9 147 59.9
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.0e-38 164.1 147 59.2
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 1.0e-38 164.1 143 58.7
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 1.4e-38 163.7 151 57.6
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.8e-38 163.3 156 56.4
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.8e-38 163.3 146 56.8
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 2.3e-38 162.9 199 50.8
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 6.7e-38 161.4 147 57.8
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 6.7e-38 161.4 163 54.0
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 6.7e-38 161.4 148 60.1
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 8.8e-38 161.0 163 57.1
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 1.5e-37 160.2 137 60.6
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 3.3e-37 159.1 147 57.1
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 3.3e-37 159.1 138 61.6
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 3.3e-37 159.1 207 48.8
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 4.4e-37 158.7 156 55.1
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 5.7e-37 158.3 147 58.5
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 9.7e-37 157.5 140 61.4
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.7e-36 156.8 137 59.1
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 1.7e-36 156.8 147 56.5
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 2.8e-36 156.0 149 55.7
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 2.8e-36 156.0 155 55.5
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 3.7e-36 155.6 137 57.7
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 4.8e-36 155.2 138 59.4
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 1.1e-35 154.1 137 59.9
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 1.4e-35 153.7 147 55.8
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 1.8e-35 153.3 131 63.4
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 2.4e-35 152.9 156 51.3
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 5.3e-35 151.8 149 53.7
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 5.3e-35 151.8 149 53.7
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 5.3e-35 151.8 158 57.6
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 5.3e-35 151.8 134 60.4
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 6.9e-35 151.4 145 52.4
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 1.5e-34 150.2 146 57.5
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 2.0e-34 149.8 135 62.2
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 2.0e-34 149.8 147 55.1
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 1.0e-33 147.5 138 58.7
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 1.0e-33 147.5 146 55.5
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 1.7e-33 146.7 154 51.3
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 1.7e-33 146.7 147 55.1
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.7e-33 146.7 147 52.4
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 2.2e-33 146.4 137 56.9
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 2.2e-33 146.4 137 56.9
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 2.9e-33 146.0 137 57.7
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 3.8e-33 145.6 146 54.1
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 3.8e-33 145.6 138 56.5
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 8.5e-33 144.4 146 51.4
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.1e-32 144.1 144 54.2
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 1.1e-32 144.1 147 53.1
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 1.4e-32 143.7 183 47.0
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.4e-32 143.7 158 50.0
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 1.4e-32 143.7 149 50.3
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 3.2e-32 142.5 136 55.1
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 4.2e-32 142.1 137 53.3
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 5.5e-32 141.7 136 55.1
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 5.5e-32 141.7 144 54.9
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 5.5e-32 141.7 137 59.1
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 7.2e-32 141.4 144 55.6
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-31 139.8 119 60.5
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 2.7e-31 139.4 136 54.4
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 2.7e-31 139.4 145 52.4
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 4.7e-31 138.7 134 57.5
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 4.7e-31 138.7 134 57.5
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 4.7e-31 138.7 143 51.7
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 4.7e-31 138.7 138 55.1
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 6.1e-31 138.3 146 50.0
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 6.1e-31 138.3 136 54.4
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 6.1e-31 138.3 138 55.8
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 7.9e-31 137.9 144 53.5
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 1.0e-30 137.5 140 51.4
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 1.4e-30 137.1 159 47.2
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 1.4e-30 137.1 139 58.3
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.8e-30 136.7 154 51.3
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 1.8e-30 136.7 134 51.5
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 2.3e-30 136.3 147 51.0
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 3.0e-30 136.0 136 53.7
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 3.0e-30 136.0 136 53.7
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 3.9e-30 135.6 148 50.0
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 3.9e-30 135.6 148 50.0
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 5.2e-30 135.2 147 50.3
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 6.7e-30 134.8 136 54.4
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 8.8e-30 134.4 136 55.1
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 8.8e-30 134.4 130 53.8
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 1.1e-29 134.0 155 46.5
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 1.1e-29 134.0 138 55.8
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 1.1e-29 134.0 145 51.0
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 7.4e-29 131.3 134 54.5
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 7.4e-29 131.3 168 46.4
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 9.7e-29 131.0 111 58.6
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 1.3e-28 130.6 148 49.3
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 1.7e-28 130.2 135 54.1
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 1.1e-27 127.5 138 52.9
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 1.8e-27 126.7 129 53.5
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 2.4e-27 126.3 139 51.8
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 3.1e-27 125.9 169 45.6
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 5.3e-27 125.2 136 52.2
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 5.3e-27 125.2 135 48.9
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 7.0e-27 124.8 135 49.6
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.2e-26 124.0 147 48.3
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 2.0e-26 123.2 135 48.9
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 3.2e-24 115.9 131 48.1
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 3.2e-24 115.9 135 47.4
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 3.2e-24 115.9 135 46.7
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 5.5e-24 115.2 102 58.8
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 2.6e-21 106.3 83 60.2
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 4.4e-21 105.5 138 44.9
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 2.2e-20 103.2 149 43.6
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 2.8e-20 102.8 116 51.7
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 4.8e-20 102.1 134 45.5
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 2.2e-17 93.2 75 64.0
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 3.8e-17 92.4 89 59.6
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 5.5e-16 88.6 146 38.4
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 4.7e-15 85.5 81 60.5
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 4.7e-15 85.5 109 47.7
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 6.1e-15 85.1 79 59.5
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 1.0e-14 84.3 81 58.0
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.8e-14 83.6 112 51.8
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 5.2e-14 82.0 79 57.0
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 2.0e-13 80.1 78 60.3
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 2.6e-13 79.7 69 52.2
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 4.4e-13 79.0 138 41.3
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 5.7e-13 78.6 91 50.5
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 7.5e-13 78.2 77 57.1
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.3e-12 77.4 77 59.7
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 1.7e-12 77.0 247 27.5
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 1.3e-09 67.4 139 36.0
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.3e-09 67.4 52 48.1
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 6.5e-09 65.1 137 36.5
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 1.1e-08 64.3 69 52.2
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 4.2e-08 62.4 104 43.3
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.2e-07 60.8 51 66.7
Cpa.g.sc117.83 Carica papaya HOM05D004607 ORTHO05D005836 1.8e-06 57.0 57 50.9


User provided reference genes

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