Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18982 Striga asiatica HOM05D005828 ORTHO05D006822 2.4e-69 265.4 137 100.0
Cc10_g15090 Coffea canephora HOM05D005828 ORTHO05D006822 2.2e-38 162.5 91 90.1
Oeu050902.1 Olea europaea HOM05D005828 ORTHO05D006822 5.5e-37 157.9 91 87.9
AUR62011415 Chenopodium quinoa HOM05D005828 ORTHO05D006822 7.9e-36 154.1 90 85.6
AUR62022881 Chenopodium quinoa HOM05D005828 ORTHO05D006822 7.9e-36 154.1 90 85.6
Ah.01g019990 Amaranthus hybridus HOM05D005828 ORTHO05D006822 1.0e-35 153.7 81 92.6
Cpa.g.sc70.13 Carica papaya HOM05D005828 ORTHO05D006822 3.9e-35 151.8 81 91.4
Migut.G00970 Erythranthe guttata HOM05D005828 ORTHO05D006822 3.9e-35 151.8 87 85.1
Thecc.08G121200 Theobroma cacao HOM05D005828 ORTHO05D006822 3.9e-35 151.8 88 86.4
Gohir.A06G042500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.7e-35 151.0 84 88.1
Gohir.D06G043500 Gossypium hirsutum HOM05D005828 ORTHO05D006822 6.7e-35 151.0 84 88.1
Gorai.010G048600 Gossypium raimondii HOM05D005828 ORTHO05D006822 6.7e-35 151.0 84 88.1
Hund16842 Selenicereus undatus HOM05D005828 ORTHO05D006822 8.8e-35 150.6 87 87.4
Ciclev10002958m.g Citrus clementina HOM05D005828 ORTHO05D006822 1.1e-34 150.2 88 85.2
Actinidia23063 Actinidia chinensis HOM05D005828 ORTHO05D006822 1.5e-34 149.8 86 84.9
Nn1g08691 Nelumbo nucifera HOM05D005828 ORTHO05D006822 1.5e-34 149.8 80 91.2
CiPaw.02G169200 Carya illinoinensis HOM05D005828 ORTHO05D006822 2.0e-34 149.4 88 84.1
Glyma.13G081900 Glycine max HOM05D005828 ORTHO05D006822 2.0e-34 149.4 81 90.1
Glyma.14G162800 Glycine max HOM05D005828 ORTHO05D006822 2.0e-34 149.4 81 90.1
EL10Ac9g21807 Beta vulgaris HOM05D005828 ORTHO05D006822 2.6e-34 149.1 86 88.4
GSVIVG01013096001 Vitis vinifera HOM05D005828 ORTHO05D006822 3.3e-34 148.7 81 88.9
Duzib041G0320 Durio zibethinus HOM05D005828 ORTHO05D006822 4.4e-34 148.3 86 86.0
Dinv40388 Davidia involucrata HOM05D005828 ORTHO05D006822 9.7e-34 147.1 90 82.2
Migut.C01150 Erythranthe guttata HOM05D005828 ORTHO05D006822 9.7e-34 147.1 86 83.7
Migut.K01196 Erythranthe guttata HOM05D005828 ORTHO05D006822 9.7e-34 147.1 81 86.4
Phvul.008G165500 Phaseolus vulgaris HOM05D005828 ORTHO05D006822 9.7e-34 147.1 81 87.7
Sc01g0001360 Simmondsia chinensis HOM05D005828 ORTHO05D006822 1.3e-33 146.7 81 87.7
Duzib093G2142 Durio zibethinus HOM05D005828 ORTHO05D006822 1.7e-33 146.4 86 86.0
Eucgr.F03768 Eucalyptus grandis HOM05D005828 ORTHO05D006822 1.7e-33 146.4 81 87.7
Sopen03g024020 Solanum pennellii HOM05D005828 ORTHO05D006822 2.2e-33 146.0 86 88.4
TWI56G1238 Tripterygium wilfordii HOM05D005828 ORTHO05D006822 2.2e-33 146.0 86 81.4
Ca_03724_v3 Cicer arietinum L. HOM05D005828 ORTHO05D006822 2.8e-33 145.6 85 83.5
ClCG11G015600 Citrullus lanatus HOM05D005828 ORTHO05D006822 2.8e-33 145.6 88 81.8
PGR042G1795 Punica granatum HOM05D005828 ORTHO05D006822 2.8e-33 145.6 84 82.1
Solyc03g093220.3 Solanum lycopersicum HOM05D005828 ORTHO05D006822 2.8e-33 145.6 86 88.4
CANSAT64G1100 Cannabis sativa HOM05D005828 ORTHO05D006822 3.7e-33 145.2 96 79.2
Nn7g37602 Nelumbo nucifera HOM05D005828 ORTHO05D006822 4.8e-33 144.8 80 88.8
Peaxi162Scf00241g00022 Petunia axillaris HOM05D005828 ORTHO05D006822 4.8e-33 144.8 77 92.2
Sed0016516 Sechium edule HOM05D005828 ORTHO05D006822 4.8e-33 144.8 92 81.5
Dinv27340 Davidia involucrata HOM05D005828 ORTHO05D006822 6.3e-33 144.4 86 82.6
CSS0005937 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 8.2e-33 144.1 90 81.1
Lalb_Chr04g0253341 Lupinus albus HOM05D005828 ORTHO05D006822 1.1e-32 143.7 81 85.2
arahy.Tifrunner.gnm1.ann1.IQQ61N Arachis hypogaea HOM05D005828 ORTHO05D006822 1.4e-32 143.3 86 82.6
CAN.G48.25 Capsicum annuum HOM05D005828 ORTHO05D006822 1.4e-32 143.3 85 84.7
MBI11_g22242_MAGBIO Magnolia biondii HOM05D005828 ORTHO05D006822 1.4e-32 143.3 86 82.6
Hma1.2p1_0248F.1_g102070 Hydrangea macrophylla HOM05D005828 ORTHO05D006822 1.8e-32 142.9 96 78.1
Rhsim10G0081200 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.8e-32 142.9 89 79.8
TPR.G8500 Trifolium pratense HOM05D005828 ORTHO05D006822 1.8e-32 142.9 89 79.8
Manes.18G074748 Manihot esculenta HOM05D005828 ORTHO05D006822 3.1e-32 142.1 95 76.8
Atru.chr13.1407 Acer truncatum HOM05D005828 ORTHO05D006822 4.1e-32 141.7 85 85.9
Psat2g078520 Pisum sativum HOM05D005828 ORTHO05D006822 4.1e-32 141.7 79 86.1
Medtr5g059050 Medicago truncatula HOM05D005828 ORTHO05D006822 5.3e-32 141.4 81 87.7
THA.LOC104810143 Tarenaya hassleriana HOM05D005828 ORTHO05D006822 5.3e-32 141.4 81 85.2
TAR628G1302 Trochodendron aralioides HOM05D005828 ORTHO05D006822 5.3e-32 141.4 87 78.2
HanXRQChr12g0379421 Helianthus annuus HOM05D005828 ORTHO05D006822 7.0e-32 141.0 85 78.8
Potri.002G086300 Populus trichocarpa HOM05D005828 ORTHO05D006822 9.1e-32 140.6 82 82.9
PSO170G1674 Papaver somniferum HOM05D005828 ORTHO05D006822 1.2e-31 140.2 79 84.8
QL09p036513 Quercus lobata HOM05D005828 ORTHO05D006822 1.2e-31 140.2 88 80.7
CDE01G0185 Ceratophyllum demersum HOM05D005828 ORTHO05D006822 1.5e-31 139.8 82 81.7
AUR62016643 Chenopodium quinoa HOM05D005828 ORTHO05D006822 2.6e-31 139.0 104 73.1
Aqoxy6G00155 Aquilegia oxysepala HOM05D005828 ORTHO05D006822 4.5e-31 138.3 80 81.2
ECA246G1275 Erigeron canadensis HOM05D005828 ORTHO05D006822 4.5e-31 138.3 81 80.2
Nitab4.5_0010023g0030 Nicotiana tabacum HOM05D005828 ORTHO05D006822 4.5e-31 138.3 77 85.7
Lj1g0023360 Lotus japonicus HOM05D005828 ORTHO05D006822 5.9e-31 137.9 81 85.2
FvH4_2g26520 Fragaria vesca HOM05D005828 ORTHO05D006822 1.0e-30 137.1 79 82.3
FAN24G3109 Fragaria x ananassa HOM05D005828 ORTHO05D006822 1.0e-30 137.1 79 82.3
Os12g0481200 Oryza sativa ssp. japonica HOM05D005828 ORTHO05D006822 1.7e-30 136.3 73 89.0
Prupe.1G501700 Prunus persica HOM05D005828 ORTHO05D006822 1.7e-30 136.3 95 73.7
RcHm_v2.0_Chr6g0295391 Rosa chinensis HOM05D005828 ORTHO05D006822 1.7e-30 136.3 91 75.8
MD15G1353400 Malus domestica HOM05D005828 ORTHO05D006822 2.2e-30 136.0 95 73.7
Nitab4.5_0002816g0110 Nicotiana tabacum HOM05D005828 ORTHO05D006822 2.2e-30 136.0 77 85.7
ATR0021G028 Amborella trichopoda HOM05D005828 ORTHO05D006822 3.8e-30 135.2 84 82.1
AL1G35150 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.1e-29 133.7 82 80.5
AL1G35290 Arabidopsis lyrata HOM05D005828 ORTHO05D006822 1.1e-29 133.7 82 80.5
AT1G21930 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.1e-29 133.7 82 80.5
CARHR022310 Cardamine hirsuta HOM05D005828 ORTHO05D006822 1.1e-29 133.7 90 74.4
CSS0009962 Camellia sinensis var. sinensis HOM05D005828 ORTHO05D006822 1.4e-29 133.3 105 69.5
Lsat_1_v5_gn_9_83901 Lactuca sativa HOM05D005828 ORTHO05D006822 1.9e-29 132.9 74 86.5
Sabra02G0067700 Salix brachista HOM05D005828 ORTHO05D006822 1.9e-29 132.9 113 66.4
Aa31LG7G5940 Aethionema arabicum HOM05D005828 ORTHO05D006822 2.5e-29 132.5 82 79.3
BcaC06g34917 Brassica carinata HOM05D005828 ORTHO05D006822 2.5e-29 132.5 91 72.5
C07p21820 Brassica napus HOM05D005828 ORTHO05D006822 2.5e-29 132.5 91 72.5
BolC7t42713H Brassica oleracea HOM05D005828 ORTHO05D006822 2.5e-29 132.5 91 72.5
Carub.0001s2142 Capsella rubella HOM05D005828 ORTHO05D006822 2.5e-29 132.5 82 79.3
Sp1g19470 Schrenkiella parvula HOM05D005828 ORTHO05D006822 3.2e-29 132.1 86 75.6
FAN15G3227 Fragaria x ananassa HOM05D005828 ORTHO05D006822 4.2e-29 131.7 79 79.7
BcaB07g32190 Brassica carinata HOM05D005828 ORTHO05D006822 7.2e-29 131.0 101 67.3
Thhalv10009188m.g Eutrema salsugineum HOM05D005828 ORTHO05D006822 9.4e-29 130.6 86 75.6
AT3G42150 Arabidopsis thaliana HOM05D005828 ORTHO05D006822 1.6e-28 129.8 82 78.0
Zm00001eb318220 Zea mays HOM05D005828 ORTHO05D006822 1.6e-28 129.8 72 83.3
FAN27G1656 Fragaria x ananassa HOM05D005828 ORTHO05D006822 2.7e-28 129.0 87 74.7
BcaB03g14247 Brassica carinata HOM05D005828 ORTHO05D006822 3.6e-28 128.6 79 79.7
RhsimUnG0054200 Rhododendron simsii HOM05D005828 ORTHO05D006822 3.6e-28 128.6 109 64.2
SalBow1G4500 Salvia bowleyana HOM05D005828 ORTHO05D006822 1.0e-27 127.1 70 90.0
unitig_22.g6732 Utricularia gibba HOM05D005828 ORTHO05D006822 1.0e-27 127.1 84 71.4
HPP92_010723 Vanilla planifolia HOM05D005828 ORTHO05D006822 1.0e-27 127.1 84 75.0
A09p42800 Brassica napus HOM05D005828 ORTHO05D006822 1.8e-27 126.3 83 74.7
BraA09t39754Z Brassica rapa HOM05D005828 ORTHO05D006822 1.8e-27 126.3 83 74.7
BcaC05g26118 Brassica carinata HOM05D005828 ORTHO05D006822 2.3e-27 125.9 83 74.7
BcaC05g26120 Brassica carinata HOM05D005828 ORTHO05D006822 2.3e-27 125.9 83 74.7
C05p20980 Brassica napus HOM05D005828 ORTHO05D006822 2.3e-27 125.9 83 74.7
BolC5t30796H Brassica oleracea HOM05D005828 ORTHO05D006822 2.3e-27 125.9 83 74.7
A07p14860 Brassica napus HOM05D005828 ORTHO05D006822 1.1e-26 123.6 77 75.3
Haze_00481 Corylus avellana HOM05D005828 ORTHO05D006822 2.0e-26 122.9 64 92.2
vmacro15901 Vaccinium macrocarpon HOM05D005828 ORTHO05D006822 2.0e-26 122.9 122 56.6
DCAR_014107 Daucus carota HOM05D005828 ORTHO05D006822 5.7e-26 121.3 68 86.8
HPP92_010646 Vanilla planifolia HOM05D005828 ORTHO05D006822 5.7e-26 121.3 84 72.6
PGSC0003DMG400014827 Solanum tuberosum HOM05D005828 ORTHO05D006822 7.4e-26 120.9 73 86.3
CsaV3_4G028420 Cucumis sativus L. HOM05D005828 ORTHO05D006822 9.7e-26 120.6 74 82.4
BcaB07g32192 Brassica carinata HOM05D005828 ORTHO05D006822 1.3e-25 120.2 86 70.9
QL09p035324 Quercus lobata HOM05D005828 ORTHO05D006822 1.3e-25 120.2 78 80.8
MELO3C010460.2 Cucumis melo HOM05D005828 ORTHO05D006822 1.7e-25 119.8 66 90.9
MD08G1168000 Malus domestica HOM05D005828 ORTHO05D006822 8.2e-25 117.5 79 75.9
DCAR_014096 Daucus carota HOM05D005828 ORTHO05D006822 1.1e-24 117.1 62 90.3
Rhsim02G0128100 Rhododendron simsii HOM05D005828 ORTHO05D006822 1.1e-24 117.1 67 83.6
PSO528G0081 Papaver somniferum HOM05D005828 ORTHO05D006822 1.2e-23 113.6 62 87.1
BolC5t30794H Brassica oleracea HOM05D005828 ORTHO05D006822 1.5e-21 106.7 66 75.8
SHI08265 Sapria himalayana HOM05D005828 ORTHO05D006822 2.1e-20 102.8 67 73.1
BcaC07g42575 Brassica carinata HOM05D005828 ORTHO05D006822 2.6e-18 95.9 79 63.3
Zm00001eb102630 Zea mays HOM05D005828 ORTHO05D006822 4.4e-18 95.1 85 61.2
Medtr5g058700 Medicago truncatula HOM05D005828 ORTHO05D006822 2.2e-17 92.8 81 65.4
SEGI_28823 Sequoiadendron giganteum HOM05D005828 ORTHO05D006822 3.1e-16 89.0 63 69.8
Pp3c4_22520 Physcomitrium patens HOM05D005828 ORTHO05D006822 3.8e-14 82.0 62 61.3
Mapoly0038s0094 Marchantia polymorpha HOM05D005828 ORTHO05D006822 1.5e-13 80.1 62 58.1
Lalb_Chr17g0343871 Lupinus albus HOM05D005828 ORTHO05D006822 2.5e-13 79.3 47 78.7
SMO232G0111 Selaginella moellendorffii HOM05D005828 ORTHO05D006822 4.0e-11 72.0 65 55.4
MD03G1196900 Malus domestica HOM05D005828 ORTHO05D006822 6.8e-11 71.2 60 61.7
AagrBONN_evm.TU.Sc2ySwM_368.871 Anthoceros agrestis HOM05D005828 ORTHO05D006822 1.5e-10 70.1 66 54.5
BcaB03g11887 Brassica carinata HOM05D005828 ORTHO05D006822 9.1e-08 60.8 48 58.3
BcaNung06341 Brassica carinata HOM05D005828 ORTHO05D006822 9.1e-08 60.8 48 58.3
BcaNung06770 Brassica carinata HOM05D005828 ORTHO05D006822 9.1e-08 60.8 48 58.3


User provided reference genes

Program Settings