Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 4.5e-62 241.1 125 100.0
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.7e-48 196.1 122 80.3
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 3.8e-45 184.9 123 76.4
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.1e-43 179.1 124 75.0
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 1.0e-42 176.8 122 72.1
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.3e-32 143.3 129 59.7
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 3.7e-32 141.7 129 60.5
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 6.3e-32 141.0 125 60.8
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 6.3e-32 141.0 130 61.5
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 6.3e-32 141.0 119 63.0
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 2.4e-31 139.0 129 62.0
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 7.0e-31 137.5 129 61.2
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 9.2e-31 137.1 125 57.6
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 1.2e-30 136.7 129 60.5
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 1.2e-30 136.7 123 59.3
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 1.2e-30 136.7 129 57.4
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 1.6e-30 136.3 125 57.6
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 1.6e-30 136.3 125 57.6
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 2.7e-30 135.6 126 60.3
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 3.5e-30 135.2 123 58.5
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 3.5e-30 135.2 127 56.7
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 4.5e-30 134.8 128 57.8
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 5.9e-30 134.4 125 60.8
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 5.9e-30 134.4 132 56.8
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 7.8e-30 134.0 129 56.6
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 7.8e-30 134.0 127 57.5
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 1.0e-29 133.7 136 55.9
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 1.3e-29 133.3 127 58.3
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 1.3e-29 133.3 123 59.3
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 1.7e-29 132.9 122 57.4
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 2.9e-29 132.1 124 59.7
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 8.6e-29 130.6 126 56.3
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 8.6e-29 130.6 127 56.7
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 1.1e-28 130.2 130 54.6
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 1.9e-28 129.4 128 54.7
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 1.9e-28 129.4 126 54.8
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 2.5e-28 129.0 137 53.3
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 2.5e-28 129.0 136 52.9
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.5e-28 129.0 122 61.5
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 2.5e-28 129.0 131 54.2
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 4.3e-28 128.3 131 53.4
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 4.3e-28 128.3 132 53.8
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 4.3e-28 128.3 122 55.7
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 4.3e-28 128.3 123 58.5
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 5.6e-28 127.9 137 52.6
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 5.6e-28 127.9 129 55.0
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 7.3e-28 127.5 127 56.7
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 7.3e-28 127.5 134 53.7
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 7.3e-28 127.5 137 53.3
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 9.5e-28 127.1 122 57.4
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 9.5e-28 127.1 126 56.3
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 2.1e-27 125.9 133 55.6
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 4.7e-27 124.8 120 55.8
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 6.1e-27 124.4 134 50.0
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 6.1e-27 124.4 130 53.8
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 6.1e-27 124.4 122 54.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.0e-26 123.6 132 54.5
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.0e-26 123.6 127 48.8
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 1.0e-26 123.6 138 52.2
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 1.4e-26 123.2 127 53.5
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 1.8e-26 122.9 135 51.1
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 2.3e-26 122.5 127 52.8
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 3.0e-26 122.1 120 54.2
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 3.0e-26 122.1 137 52.6
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 4.0e-26 121.7 135 48.9
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 6.8e-26 120.9 139 49.6
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 8.9e-26 120.6 122 53.3
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.6e-25 119.0 123 52.8
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.6e-25 119.0 123 52.8
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 2.6e-25 119.0 138 50.7
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 7.5e-25 117.5 134 50.7
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 9.8e-25 117.1 133 48.1
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 1.3e-24 116.7 123 50.4
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 1.7e-24 116.3 136 48.5
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 2.9e-24 115.5 128 50.8
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 4.9e-24 114.8 124 51.6
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 5.4e-23 111.3 134 46.3
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 7.0e-23 110.9 114 51.8
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 7.0e-23 110.9 128 49.2
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.6e-22 109.8 134 45.5
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 2.7e-22 109.0 132 48.5
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 6.0e-22 107.8 119 49.6
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 1.7e-21 106.3 122 50.8
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 3.0e-21 105.5 133 50.4
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 3.9e-21 105.1 121 48.8
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 3.9e-21 105.1 132 46.2
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 3.9e-21 105.1 121 48.8
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 3.9e-21 105.1 121 48.8
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 7.3e-20 100.9 146 41.8
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 1.2e-19 100.1 126 46.8
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 1.2e-19 100.1 126 46.0
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 2.3e-18 95.9 120 45.0
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 6.8e-18 94.4 108 48.1
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 6.8e-18 94.4 123 45.5
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 4.4e-17 91.7 108 46.3
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 4.4e-17 91.7 205 31.7
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 1.3e-16 90.1 129 41.9
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 4.9e-16 88.2 70 65.7
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 1.4e-15 86.7 69 59.4
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 2.4e-15 85.9 122 42.6
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 3.2e-15 85.5 118 40.7
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 7.0e-15 84.3 122 36.9
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 1.6e-14 83.2 133 45.9
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 4.6e-14 81.6 69 59.4
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 1.0e-13 80.5 210 30.5
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 1.0e-13 80.5 67 62.7
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 1.1e-12 77.0 131 33.6
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 4.0e-10 68.6 124 37.1
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 1.4e-07 60.1 74 51.4
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 6.0e-06 54.7 97 39.2


User provided reference genes

Program Settings