Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 7.5e-56 220.3 114 100.0
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 2.3e-28 129.0 115 67.0
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 2.4e-17 92.4 116 49.1
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 3.8e-15 85.1 91 56.0
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 7.9e-13 77.4 113 46.9
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 4.3e-11 71.6 123 39.8
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 1.3e-10 70.1 89 51.7
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 2.8e-10 68.9 77 50.6
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 8.1e-10 67.4 103 37.9
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 1.1e-09 67.0 106 42.5
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 1.4e-09 66.6 113 40.7
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 2.4e-09 65.9 103 36.9
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 2.4e-09 65.9 111 35.1
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 4.0e-09 65.1 111 36.9
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 5.3e-09 64.7 111 39.6
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 5.3e-09 64.7 110 40.0
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 6.9e-09 64.3 99 39.4
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 1.5e-08 63.2 111 37.8
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 2.0e-08 62.8 110 36.4
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 2.0e-08 62.8 103 38.8
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 2.6e-08 62.4 96 39.6
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 2.6e-08 62.4 115 38.3
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 2.6e-08 62.4 88 45.5
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 3.4e-08 62.0 111 33.3
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 5.8e-08 61.2 111 35.1
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 5.8e-08 61.2 112 36.6
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 9.9e-08 60.5 76 42.1
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 1.7e-07 59.7 114 34.2
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 2.2e-07 59.3 94 42.6
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 2.2e-07 59.3 94 41.5
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 2.9e-07 58.9 103 38.8
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 2.9e-07 58.9 78 42.3
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 3.8e-07 58.5 113 37.2
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 3.8e-07 58.5 79 39.2
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 3.8e-07 58.5 98 38.8
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 3.8e-07 58.5 100 37.0
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 4.9e-07 58.2 97 37.1
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 4.9e-07 58.2 112 36.6
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 6.4e-07 57.8 71 45.1
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 6.4e-07 57.8 95 42.1
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 1.1e-06 57.0 93 35.5
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.4e-06 56.6 91 37.4
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 1.4e-06 56.6 98 37.8
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 1.9e-06 56.2 94 37.2
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 2.4e-06 55.8 113 37.2
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 3.2e-06 55.5 93 39.8
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 5.5e-06 54.7 91 38.5
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 5.5e-06 54.7 99 36.4
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 5.5e-06 54.7 79 40.5
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 9.3e-06 53.9 115 34.8
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 9.3e-06 53.9 85 40.0
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 9.3e-06 53.9 105 33.3


User provided reference genes

Program Settings