Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 4.5e-58 227.6 110 100.0
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 5.2e-38 161.0 108 71.3
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.5e-37 159.5 111 71.2
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 9.2e-35 150.2 103 70.9
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 9.2e-35 150.2 110 69.1
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 1.2e-34 149.8 109 67.9
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 1.6e-34 149.4 110 69.1
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 3.5e-34 148.3 107 68.2
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 3.5e-34 148.3 103 71.8
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 6.0e-34 147.5 103 68.9
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 3.0e-33 145.2 107 68.2
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 3.0e-33 145.2 107 66.4
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 3.9e-33 144.8 107 69.2
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 6.6e-33 144.1 107 66.4
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 8.6e-33 143.7 109 65.1
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 1.1e-32 143.3 107 67.3
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.5e-32 142.1 107 65.4
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 3.3e-32 141.7 110 60.0
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 3.3e-32 141.7 107 64.5
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 4.3e-32 141.4 107 68.2
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 5.6e-32 141.0 107 64.5
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 9.5e-32 140.2 108 63.0
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 9.5e-32 140.2 105 63.8
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 1.2e-31 139.8 103 68.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.6e-31 139.4 105 61.9
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 2.8e-31 138.7 107 62.6
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 2.8e-31 138.7 106 63.2
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 2.8e-31 138.7 110 61.8
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 3.6e-31 138.3 106 65.1
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 3.6e-31 138.3 106 65.1
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 3.6e-31 138.3 106 64.2
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 4.7e-31 137.9 107 62.6
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 4.7e-31 137.9 107 65.4
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 6.2e-31 137.5 103 62.1
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 8.1e-31 137.1 107 61.7
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 1.4e-30 136.3 103 67.0
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 1.4e-30 136.3 107 61.7
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 1.8e-30 136.0 109 58.7
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 1.8e-30 136.0 96 68.8
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 1.8e-30 136.0 96 68.8
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 1.8e-30 136.0 96 68.8
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.8e-30 136.0 107 60.7
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.8e-30 136.0 107 59.8
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.3e-30 135.6 103 66.0
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 2.3e-30 135.6 103 64.1
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 3.1e-30 135.2 107 62.6
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 4.0e-30 134.8 109 60.6
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 5.2e-30 134.4 104 62.5
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 5.2e-30 134.4 103 63.1
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 5.2e-30 134.4 103 66.0
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 6.8e-30 134.0 95 66.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 6.8e-30 134.0 96 67.7
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 6.8e-30 134.0 100 64.0
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 8.9e-30 133.7 109 63.3
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.2e-29 133.3 110 62.7
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 1.2e-29 133.3 103 62.1
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.0e-29 132.5 103 62.1
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 2.6e-29 132.1 112 55.4
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.6e-29 132.1 103 63.1
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 3.4e-29 131.7 107 57.9
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 3.4e-29 131.7 111 59.5
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 5.8e-29 131.0 109 60.6
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 1.3e-28 129.8 103 62.1
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 1.7e-28 129.4 109 59.6
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 2.2e-28 129.0 109 59.6
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 2.2e-28 129.0 109 59.6
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 3.7e-28 128.3 102 59.8
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 4.9e-28 127.9 102 58.8
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 6.4e-28 127.5 110 56.4
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 6.4e-28 127.5 107 56.1
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 8.3e-28 127.1 109 55.0
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.1e-27 126.7 110 55.5
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.1e-27 126.7 111 57.7
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 1.9e-27 125.9 109 58.7
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 1.9e-27 125.9 109 58.7
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 3.2e-27 125.2 107 57.9
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 3.2e-27 125.2 107 56.1
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 7.1e-27 124.0 109 56.9
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 7.1e-27 124.0 103 58.3
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 9.2e-27 123.6 106 54.7
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.2e-26 123.2 110 55.5
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.6e-26 122.9 97 59.8
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.6e-26 122.9 113 53.1
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.7e-26 122.1 115 54.8
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 4.6e-26 121.3 112 53.6
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 1.3e-25 119.8 107 57.9
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 3.9e-25 118.2 104 52.9
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 5.1e-25 117.9 106 52.8
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 8.6e-25 117.1 113 52.2
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.1e-24 116.7 104 51.9
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.9e-24 115.9 113 51.3
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 3.3e-24 115.2 107 53.3
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 5.6e-24 114.4 104 51.9
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 1.2e-23 113.2 138 46.4
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 2.1e-23 112.5 68 73.5
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 3.6e-23 111.7 104 51.0
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 3.6e-23 111.7 104 51.0
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 1.4e-22 109.8 104 51.0
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 1.8e-22 109.4 103 51.5
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 2.4e-22 109.0 95 52.6
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 2.4e-22 109.0 68 73.5
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 6.8e-22 107.5 83 66.3
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.5e-21 106.3 83 63.9
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 2.0e-21 105.9 83 65.1
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 2.0e-21 105.9 79 68.4
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 3.4e-21 105.1 93 57.0
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 2.2e-20 102.4 83 62.7
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 7.1e-19 97.4 84 56.0
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 3.9e-17 91.7 94 46.8
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 3.9e-17 91.7 69 69.6
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 5.6e-16 87.8 118 38.1
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 7.3e-16 87.4 68 57.4
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 2.4e-14 82.4 70 62.9
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 4.4e-13 78.2 151 32.5
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 7.6e-13 77.4 69 60.9
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 4.6e-10 68.2 52 61.5
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 1.0e-09 67.0 102 39.2
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 4.3e-08 61.6 56 58.9
MCO09G076 Micromonas commoda HOM05D006879 ORTHO05D008452 4.8e-07 58.2 117 32.5


User provided reference genes

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