Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18962 Striga asiatica HOM05D004057 ORTHO05D004805 1.3e-165 586.3 293 100.0
SGA_v2.0_scaffold24G10457 Striga asiatica HOM05D004057 ORTHO05D004805 5.0e-96 355.1 235 77.9
SalBow7G0573 Salvia bowleyana HOM05D004057 ORTHO05D004805 1.1e-90 337.4 237 73.4
Cc10_g11980 Coffea canephora HOM05D004057 ORTHO05D004805 1.2e-86 323.9 234 72.6
Actinidia21326 Actinidia chinensis HOM05D004057 ORTHO05D004805 1.0e-85 320.9 234 71.4
Migut.C01130 Erythranthe guttata HOM05D004057 ORTHO05D004805 3.1e-85 319.3 234 70.1
Ciclev10000821m.g Citrus clementina HOM05D004057 ORTHO05D004805 6.8e-85 318.2 234 70.5
Oeu026153.2 Olea europaea HOM05D004057 ORTHO05D004805 6.8e-85 318.2 234 70.9
MSTRG.24171 Avicennia marina HOM05D004057 ORTHO05D004805 2.6e-84 316.2 235 71.5
CSS0049616 Camellia sinensis var. sinensis HOM05D004057 ORTHO05D004805 9.8e-84 314.3 235 69.8
Dinv07215 Davidia involucrata HOM05D004057 ORTHO05D004805 4.9e-83 312.0 234 69.7
Potri.002G083200 Populus trichocarpa HOM05D004057 ORTHO05D004805 6.4e-83 311.6 234 67.5
Oeu040414.2 Olea europaea HOM05D004057 ORTHO05D004805 8.3e-83 311.2 235 68.9
Sopen11g007590 Solanum pennellii HOM05D004057 ORTHO05D004805 8.3e-83 311.2 236 68.2
MSTRG.1440 Avicennia marina HOM05D004057 ORTHO05D004805 1.4e-82 310.5 241 68.5
Eucgr.F03791 Eucalyptus grandis HOM05D004057 ORTHO05D004805 1.4e-82 310.5 234 68.8
Solyc11g012850.2 Solanum lycopersicum HOM05D004057 ORTHO05D004805 3.2e-82 309.3 236 67.8
Manes.02G163700 Manihot esculenta HOM05D004057 ORTHO05D004805 7.0e-82 308.1 234 67.9
TWI34G1725 Tripterygium wilfordii HOM05D004057 ORTHO05D004805 9.2e-82 307.8 232 68.5
Potri.005G178300 Populus trichocarpa HOM05D004057 ORTHO05D004805 1.2e-81 307.4 234 66.2
PGSC0003DMG402000895 Solanum tuberosum HOM05D004057 ORTHO05D004805 1.2e-81 307.4 238 65.5
Thecc.08G125900 Theobroma cacao HOM05D004057 ORTHO05D004805 1.2e-81 307.4 236 70.3
Cfa016023 Carpinus fangiana HOM05D004057 ORTHO05D004805 2.0e-81 306.6 236 66.5
Nitab4.5_0001803g0050 Nicotiana tabacum HOM05D004057 ORTHO05D004805 2.0e-81 306.6 234 67.9
Atru.chr13.1487 Acer truncatum HOM05D004057 ORTHO05D004805 2.7e-81 306.2 229 68.1
MELO3C010614.2 Cucumis melo HOM05D004057 ORTHO05D004805 6.0e-81 305.1 230 67.4
THA.LOC104817365 Tarenaya hassleriana HOM05D004057 ORTHO05D004805 6.0e-81 305.1 234 68.4
Haze_00436 Corylus avellana HOM05D004057 ORTHO05D004805 1.0e-80 304.3 236 65.3
Hma1.2p1_0129F.1_g060250 Hydrangea macrophylla HOM05D004057 ORTHO05D004805 1.3e-80 303.9 233 67.8
Sabra02G0065200 Salix brachista HOM05D004057 ORTHO05D004805 2.3e-80 303.1 229 65.5
Prupe.1G495400 Prunus persica HOM05D004057 ORTHO05D004805 3.9e-80 302.4 237 65.4
Nitab4.5_0001996g0080 Nicotiana tabacum HOM05D004057 ORTHO05D004805 5.0e-80 302.0 235 65.1
ClCG08G005680 Citrullus lanatus HOM05D004057 ORTHO05D004805 6.6e-80 301.6 230 66.5
Lj4A628G54 Lonicera japonica HOM05D004057 ORTHO05D004805 6.6e-80 301.6 234 67.5
SalBow6G4711 Salvia bowleyana HOM05D004057 ORTHO05D004805 1.1e-79 300.8 249 65.1
MD08G1162200 Malus domestica HOM05D004057 ORTHO05D004805 1.5e-79 300.4 237 65.0
TAR376G1135 Trochodendron aralioides HOM05D004057 ORTHO05D004805 1.5e-79 300.4 243 65.0
Duzib093G0750 Durio zibethinus HOM05D004057 ORTHO05D004805 2.5e-79 299.7 236 68.2
Gohir.D02G080100 Gossypium hirsutum HOM05D004057 ORTHO05D004805 3.3e-79 299.3 234 67.9
Gorai.005G089400 Gossypium raimondii HOM05D004057 ORTHO05D004805 5.6e-79 298.5 235 68.5
GSVIVG01008862001 Vitis vinifera HOM05D004057 ORTHO05D004805 5.6e-79 298.5 236 65.3
CsaV3_6G034450 Cucumis sativus L. HOM05D004057 ORTHO05D004805 7.3e-79 298.1 230 66.1
Gohir.A02G072900 Gossypium hirsutum HOM05D004057 ORTHO05D004805 7.3e-79 298.1 236 67.8
AUR62014331 Chenopodium quinoa HOM05D004057 ORTHO05D004805 1.6e-78 297.0 234 66.2
Aqoxy6G00221 Aquilegia oxysepala HOM05D004057 ORTHO05D004805 2.1e-78 296.6 236 64.4
PGR042G0804 Punica granatum HOM05D004057 ORTHO05D004805 2.1e-78 296.6 235 67.2
TWI60G0519 Tripterygium wilfordii HOM05D004057 ORTHO05D004805 2.1e-78 296.6 235 66.0
Glyma.04G249400 Glycine max HOM05D004057 ORTHO05D004805 6.2e-78 295.0 234 65.4
AUR62019074 Chenopodium quinoa HOM05D004057 ORTHO05D004805 8.0e-78 294.7 234 65.8
Nitab4.5_0003719g0050 Nicotiana tabacum HOM05D004057 ORTHO05D004805 8.0e-78 294.7 231 65.8
QL09p034469 Quercus lobata HOM05D004057 ORTHO05D004805 1.1e-77 294.3 234 65.0
MD15G1347600 Malus domestica HOM05D004057 ORTHO05D004805 1.4e-77 293.9 237 64.6
Solyc06g060310.3 Solanum lycopersicum HOM05D004057 ORTHO05D004805 2.3e-77 293.1 236 64.8
Rhsim06G0103100 Rhododendron simsii HOM05D004057 ORTHO05D004805 3.1e-77 292.7 235 66.4
HanXRQChr04g0111611 Helianthus annuus HOM05D004057 ORTHO05D004805 4.0e-77 292.4 236 64.4
Ah.05g171070 Amaranthus hybridus HOM05D004057 ORTHO05D004805 5.2e-77 292.0 234 64.5
PGSC0003DMG400017570 Solanum tuberosum HOM05D004057 ORTHO05D004805 6.8e-77 291.6 236 64.0
Glyma.06G113500 Glycine max HOM05D004057 ORTHO05D004805 8.9e-77 291.2 234 65.4
CAN.G2.28 Capsicum annuum HOM05D004057 ORTHO05D004805 2.6e-76 289.7 225 63.6
CAN.G1040.4 Capsicum annuum HOM05D004057 ORTHO05D004805 4.4e-76 288.9 235 63.8
Sopen06g020430 Solanum pennellii HOM05D004057 ORTHO05D004805 4.4e-76 288.9 237 63.7
Lsat_1_v5_gn_1_8361 Lactuca sativa HOM05D004057 ORTHO05D004805 5.8e-76 288.5 240 64.2
Nn5g28304 Nelumbo nucifera HOM05D004057 ORTHO05D004805 9.8e-76 287.7 243 63.0
Sed0006403 Sechium edule HOM05D004057 ORTHO05D004805 1.7e-75 287.0 234 64.1
DCAR_014388 Daucus carota HOM05D004057 ORTHO05D004805 2.2e-75 286.6 234 62.8
Sed0018002 Sechium edule HOM05D004057 ORTHO05D004805 2.2e-75 286.6 234 62.8
FAN20G2710 Fragaria x ananassa HOM05D004057 ORTHO05D004805 2.9e-75 286.2 235 65.1
Gohir.D05G237600 Gossypium hirsutum HOM05D004057 ORTHO05D004805 3.7e-75 285.8 235 66.8
Gorai.009G246000 Gossypium raimondii HOM05D004057 ORTHO05D004805 3.7e-75 285.8 235 67.2
Nitab4.5_0000322g0180 Nicotiana tabacum HOM05D004057 ORTHO05D004805 6.4e-75 285.0 231 63.6
Gohir.A05G235300 Gossypium hirsutum HOM05D004057 ORTHO05D004805 8.3e-75 284.6 235 65.5
Thhalv10011377m.g Eutrema salsugineum HOM05D004057 ORTHO05D004805 1.1e-74 284.3 232 64.2
arahy.Tifrunner.gnm1.ann1.PA3NAF Arachis hypogaea HOM05D004057 ORTHO05D004805 3.2e-74 282.7 234 64.1
arahy.Tifrunner.gnm1.ann1.P29Y0H Arachis hypogaea HOM05D004057 ORTHO05D004805 4.1e-74 282.3 234 64.1
Lalb_Chr17g0343711 Lupinus albus HOM05D004057 ORTHO05D004805 4.1e-74 282.3 234 64.5
BraSC36t46051Z Brassica rapa HOM05D004057 ORTHO05D004805 5.4e-74 282.0 232 63.8
RcHm_v2.0_Chr6g0295881 Rosa chinensis HOM05D004057 ORTHO05D004805 5.4e-74 282.0 235 64.7
Sp1g33540 Schrenkiella parvula HOM05D004057 ORTHO05D004805 5.4e-74 282.0 232 64.2
MBI16_g07661_MAGBIO Magnolia biondii HOM05D004057 ORTHO05D004805 9.2e-74 281.2 229 65.5
FAN15G2848 Fragaria x ananassa HOM05D004057 ORTHO05D004805 1.6e-73 280.4 235 63.4
FvH4_2g27000 Fragaria vesca HOM05D004057 ORTHO05D004805 2.1e-73 280.0 235 63.4
FAN24G3123 Fragaria x ananassa HOM05D004057 ORTHO05D004805 2.1e-73 280.0 235 63.4
Hund17295 Selenicereus undatus HOM05D004057 ORTHO05D004805 2.1e-73 280.0 234 63.2
Aa31LG6G9340 Aethionema arabicum HOM05D004057 ORTHO05D004805 2.7e-73 279.6 235 63.8
BcaB04g17588 Brassica carinata HOM05D004057 ORTHO05D004805 3.5e-73 279.3 234 63.7
Ca_12629_v3 Cicer arietinum L. HOM05D004057 ORTHO05D004805 3.5e-73 279.3 234 64.1
Lalb_Chr10g0101631 Lupinus albus HOM05D004057 ORTHO05D004805 4.6e-73 278.9 234 64.5
A10p07530 Brassica napus HOM05D004057 ORTHO05D004805 6.0e-73 278.5 232 63.4
Sabra05G0134800 Salix brachista HOM05D004057 ORTHO05D004805 6.0e-73 278.5 251 60.6
Glyma.13G078400 Glycine max HOM05D004057 ORTHO05D004805 1.3e-72 277.3 234 64.1
TPR.G25791 Trifolium pratense HOM05D004057 ORTHO05D004805 3.9e-72 275.8 234 64.1
BcaB07g33948 Brassica carinata HOM05D004057 ORTHO05D004805 5.1e-72 275.4 232 62.9
AT1G44446 Arabidopsis thaliana HOM05D004057 ORTHO05D004805 6.6e-72 275.0 234 61.5
Peaxi162Scf00051g01011 Petunia axillaris HOM05D004057 ORTHO05D004805 6.6e-72 275.0 208 66.8
ECA247G1991 Erigeron canadensis HOM05D004057 ORTHO05D004805 8.6e-72 274.6 237 60.8
Carub.0001s3519 Capsella rubella HOM05D004057 ORTHO05D004805 1.9e-71 273.5 234 60.7
Phvul.008G161000 Phaseolus vulgaris HOM05D004057 ORTHO05D004805 1.9e-71 273.5 235 65.1
Medtr1g030480 Medicago truncatula HOM05D004057 ORTHO05D004805 2.5e-71 273.1 231 62.8
AL1G52310 Arabidopsis lyrata HOM05D004057 ORTHO05D004805 4.3e-71 272.3 234 60.3
CARHR035930 Cardamine hirsuta HOM05D004057 ORTHO05D004805 5.6e-71 271.9 235 61.3
EL10Ac1g01020 Beta vulgaris HOM05D004057 ORTHO05D004805 1.2e-70 270.8 234 63.2
Psat6g041720 Pisum sativum HOM05D004057 ORTHO05D004805 1.2e-70 270.8 238 63.4
unitig_22.g6737 Utricularia gibba HOM05D004057 ORTHO05D004805 1.2e-70 270.8 237 62.9
CAN.G1040.2 Capsicum annuum HOM05D004057 ORTHO05D004805 1.6e-70 270.4 236 61.9
Lj1g0001948 Lotus japonicus HOM05D004057 ORTHO05D004805 3.6e-70 269.2 244 62.3
VMungo0647G0399 Vigna mungo HOM05D004057 ORTHO05D004805 4.7e-70 268.9 234 63.2
CDE08G1132 Ceratophyllum demersum HOM05D004057 ORTHO05D004805 3.1e-69 266.2 222 60.8
Sc02g0004900 Simmondsia chinensis HOM05D004057 ORTHO05D004805 8.9e-69 264.6 228 62.3
CDE06G1807 Ceratophyllum demersum HOM05D004057 ORTHO05D004805 5.8e-68 261.9 228 59.2
ECA232G4152 Erigeron canadensis HOM05D004057 ORTHO05D004805 7.5e-68 261.5 243 58.0
Lj7A342T52 Lonicera japonica HOM05D004057 ORTHO05D004805 7.5e-68 261.5 207 63.8
HanXRQChr11g0325991 Helianthus annuus HOM05D004057 ORTHO05D004805 1.3e-67 260.8 236 64.0
BolC6t35201H Brassica oleracea HOM05D004057 ORTHO05D004805 8.3e-67 258.1 230 61.3
Os10g0567400 Oryza sativa ssp. japonica HOM05D004057 ORTHO05D004805 1.4e-66 257.3 236 57.6
BcaC08g42850 Brassica carinata HOM05D004057 ORTHO05D004805 3.2e-66 256.1 230 60.9
C06p00650 Brassica napus HOM05D004057 ORTHO05D004805 3.2e-66 256.1 230 60.9
PSO170G0366 Papaver somniferum HOM05D004057 ORTHO05D004805 4.1e-66 255.8 253 54.5
PSO528G0101 Papaver somniferum HOM05D004057 ORTHO05D004805 2.1e-65 253.4 253 53.8
BcaC07g37298 Brassica carinata HOM05D004057 ORTHO05D004805 1.7e-64 250.4 232 59.5
C08p07320 Brassica napus HOM05D004057 ORTHO05D004805 1.7e-64 250.4 232 59.5
BolC8t47573H Brassica oleracea HOM05D004057 ORTHO05D004805 1.7e-64 250.4 232 59.5
Lalb_Chr08g0241431 Lupinus albus HOM05D004057 ORTHO05D004805 1.5e-63 247.3 253 57.7
Hund26806 Selenicereus undatus HOM05D004057 ORTHO05D004805 2.5e-63 246.5 202 64.4
Zm00001eb362510 Zea mays HOM05D004057 ORTHO05D004805 1.8e-61 240.4 237 54.9
ATR0584G119 Amborella trichopoda HOM05D004057 ORTHO05D004805 2.4e-61 240.0 212 59.4
Nn1g08791 Nelumbo nucifera HOM05D004057 ORTHO05D004805 5.2e-61 238.8 204 61.3
Cpa.g.sc64.91 Carica papaya HOM05D004057 ORTHO05D004805 1.4e-58 230.7 434 38.2
Zm00001eb140370 Zea mays HOM05D004057 ORTHO05D004805 2.4e-58 229.9 202 60.9
CDE02G4293 Ceratophyllum demersum HOM05D004057 ORTHO05D004805 3.2e-58 229.6 231 52.4
BcaB01g01218 Brassica carinata HOM05D004057 ORTHO05D004805 9.2e-58 228.0 185 64.3
Duzib116G0519 Durio zibethinus HOM05D004057 ORTHO05D004805 2.3e-56 223.4 438 37.9
CDE08G1676 Ceratophyllum demersum HOM05D004057 ORTHO05D004805 3.0e-56 223.0 233 51.9
SGA_v2.0_scaffold275G46567 Striga asiatica HOM05D004057 ORTHO05D004805 3.3e-55 219.5 241 57.7
Os10g0567100 Oryza sativa ssp. japonica HOM05D004057 ORTHO05D004805 2.4e-53 213.4 206 55.3
Phvul.008G167850 Phaseolus vulgaris HOM05D004057 ORTHO05D004805 9.9e-52 208.0 178 64.6
Manes.18G077506 Manihot esculenta HOM05D004057 ORTHO05D004805 5.6e-47 192.2 218 50.0
Oeu028564.1 Olea europaea HOM05D004057 ORTHO05D004805 3.2e-42 176.4 397 33.2
CiPaw.05G221100 Carya illinoinensis HOM05D004057 ORTHO05D004805 2.3e-40 170.2 135 65.9
Pp3c19_22390 Physcomitrium patens HOM05D004057 ORTHO05D004805 1.5e-39 167.5 207 47.3
AagrBONN_evm.TU.Sc2ySwM_117.505 Anthoceros agrestis HOM05D004057 ORTHO05D004805 4.3e-39 166.0 209 49.3
Mapoly0101s0060 Marchantia polymorpha HOM05D004057 ORTHO05D004805 4.3e-39 166.0 202 47.0
Phvul.L001769 Phaseolus vulgaris HOM05D004057 ORTHO05D004805 4.3e-39 166.0 135 67.4
Glyma.14G150600 Glycine max HOM05D004057 ORTHO05D004805 1.3e-38 164.5 135 65.9
SMO228G0162 Selaginella moellendorffii HOM05D004057 ORTHO05D004805 2.1e-38 163.7 162 54.3
Pp3c22_20970 Physcomitrium patens HOM05D004057 ORTHO05D004805 4.9e-35 152.5 190 46.8
Dinv27308 Davidia involucrata HOM05D004057 ORTHO05D004805 8.2e-30 135.2 112 64.3
BcaB01g01394 Brassica carinata HOM05D004057 ORTHO05D004805 5.3e-29 132.5 122 59.8
SEGI_36005 Sequoiadendron giganteum HOM05D004057 ORTHO05D004805 3.4e-28 129.8 139 52.5
CiPaw.06G031400 Carya illinoinensis HOM05D004057 ORTHO05D004805 5.5e-26 122.5 112 58.0
CBR_g46907 Chara braunii HOM05D004057 ORTHO05D004805 1.5e-20 104.4 99 53.5
TAR628G1403 Trochodendron aralioides HOM05D004057 ORTHO05D004805 1.0e-19 101.7 65 76.9
COL.COLO4_16780 Corchorus olitorius HOM05D004057 ORTHO05D004805 3.2e-18 96.7 133 47.4
TAR628G0371 Trochodendron aralioides HOM05D004057 ORTHO05D004805 5.5e-18 95.9 46 89.1
CDE08G1658 Ceratophyllum demersum HOM05D004057 ORTHO05D004805 3.0e-16 90.1 46 80.4
Hund26805 Selenicereus undatus HOM05D004057 ORTHO05D004805 3.0e-16 90.1 49 77.6
SEGI_00888 Sequoiadendron giganteum HOM05D004057 ORTHO05D004805 8.8e-16 88.6 49 75.5
FAN27G1712 Fragaria x ananassa HOM05D004057 ORTHO05D004805 1.4e-13 81.3 46 80.4
Zm00001eb089520 Zea mays HOM05D004057 ORTHO05D004805 3.2e-10 70.1 31 90.3
MCO16G160 Micromonas commoda HOM05D004057 ORTHO05D004805 2.3e-08 63.9 42 66.7
Cre01.g043350 Chlamydomonas reinhardtii HOM05D004057 ORTHO05D004805 6.7e-08 62.4 68 50.0
PRCOL_00003666 Prasinoderma coloniale HOM05D004057 ORTHO05D004805 6.7e-08 62.4 52 57.7


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