Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 3.1e-122 441.8 224 100.0
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.2e-113 413.3 213 98.6
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 2.2e-75 286.2 216 74.5
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 2.7e-65 252.7 129 100.0
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.8e-46 189.5 222 52.3
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.0e-44 183.3 210 54.8
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 1.3e-43 180.6 217 53.5
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 6.4e-43 178.3 214 54.2
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.4e-42 177.2 210 54.3
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 7.1e-42 174.9 216 50.5
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.5e-39 167.2 201 51.7
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 2.8e-38 162.9 223 46.2
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.2e-36 157.5 226 43.8
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.5e-36 157.1 211 45.5
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 2.6e-36 156.4 222 47.3
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 2.6e-36 156.4 226 42.5
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 5.8e-36 155.2 213 48.4
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.9e-34 150.2 212 45.8
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 1.9e-34 150.2 220 44.5
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 2.4e-34 149.8 213 46.5
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.2e-33 147.5 213 46.9
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 5.1e-32 142.1 218 42.2
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 8.7e-32 141.4 227 42.7
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 8.7e-32 141.4 224 40.2
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 3.3e-31 139.4 229 40.2
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.6e-30 137.1 219 44.3
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.6e-30 137.1 162 48.8
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 3.7e-30 136.0 230 40.0
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 4.8e-30 135.6 214 46.3
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.4e-29 133.3 216 41.2
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 4.0e-29 132.5 211 42.7
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 6.9e-29 131.7 227 41.4
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.2e-28 131.0 214 41.1
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.5e-28 130.6 214 43.0
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 2.0e-28 130.2 209 39.2
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 5.8e-28 128.6 211 41.2
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 7.6e-28 128.3 210 42.9
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 3.8e-27 125.9 255 36.9
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 6.5e-27 125.2 221 41.6
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 1.4e-26 124.0 178 47.2
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.4e-26 124.0 214 41.1
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.9e-26 123.6 209 41.1
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 3.2e-26 122.9 212 42.9
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 4.6e-25 119.0 215 39.1
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.8e-24 117.1 218 41.3
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 6.7e-24 115.2 212 39.2
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.1e-23 114.4 190 45.3
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.5e-23 114.0 154 49.4
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 1.9e-23 113.6 201 41.8
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 3.3e-23 112.8 203 38.9
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 5.7e-23 112.1 215 40.5
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 7.4e-23 111.7 215 40.5
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.3e-22 110.9 211 39.8
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 2.1e-22 110.2 212 38.7
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 4.1e-21 105.9 204 37.7
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 1.4e-18 97.4 212 34.9
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 1.9e-18 97.1 223 34.5
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.2e-18 96.3 206 36.4
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 5.5e-18 95.5 206 34.5
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 7.2e-18 95.1 180 41.7
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 9.3e-18 94.7 212 34.9
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 1.6e-17 94.0 177 41.8
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 3.0e-16 89.7 215 36.7
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 5.1e-16 89.0 209 35.4
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 6.7e-16 88.6 153 37.9
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 1.5e-15 87.4 213 32.4
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.9e-15 87.0 213 37.6
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 4.3e-15 85.9 198 35.9
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.6e-14 84.0 188 35.1
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.2e-14 83.6 117 39.3
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 2.2e-14 83.6 213 33.3
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 3.7e-14 82.8 212 31.1
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 3.7e-14 82.8 120 41.7
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 6.3e-14 82.0 212 32.5
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 6.3e-14 82.0 195 35.9
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 8.2e-14 81.6 97 44.3
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.1e-13 81.3 121 43.8
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.4e-13 80.9 148 39.9
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 1.4e-13 80.9 167 34.1
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.8e-13 80.5 154 39.6
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 2.4e-13 80.1 172 39.5
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 3.1e-13 79.7 207 32.4
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 5.3e-13 79.0 206 31.6
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 9.0e-13 78.2 219 31.1
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 1.2e-12 77.8 102 43.1
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.5e-12 77.4 117 37.6
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.5e-12 77.4 192 33.9
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.5e-12 77.4 93 41.9
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 1.5e-12 77.4 125 37.6
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 2.0e-12 77.0 174 32.8
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 2.6e-12 76.6 207 34.3
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.6e-12 76.6 139 36.7
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 7.7e-12 75.1 160 37.5
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 7.7e-12 75.1 154 34.4
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 1.0e-11 74.7 119 38.7
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.7e-11 73.9 158 36.1
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.7e-11 73.9 113 38.9
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.9e-11 73.2 154 37.0
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.1e-10 71.2 179 33.5
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.4e-10 70.9 125 36.8
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 1.4e-10 70.9 175 34.9
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.5e-10 70.1 122 34.4
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 2.5e-10 70.1 90 41.1
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.2e-10 69.7 195 29.7
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.2e-10 69.7 195 29.7
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 7.2e-10 68.6 176 35.8
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 9.4e-10 68.2 219 27.9
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 4.6e-09 65.9 179 29.1
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 4.6e-09 65.9 133 34.6
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 3.0e-08 63.2 212 29.7
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 3.0e-08 63.2 199 28.6
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 3.9e-08 62.8 101 33.7
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 2.0e-07 60.5 151 31.1
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 7.4e-07 58.5 98 30.6
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 1.3e-06 57.8 178 28.7
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 2.2e-06 57.0 124 31.5
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 2.2e-06 57.0 124 31.5
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 2.2e-06 57.0 168 31.0
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.8e-06 56.6 37 64.9
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 6.3e-06 55.5 37 62.2
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 8.2e-06 55.1 172 32.6


User provided reference genes

Program Settings