Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 4.2e-133 478.0 242 100.0
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 2.2e-113 412.5 213 98.6
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 4.0e-75 285.4 214 74.8
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 2.9e-65 252.7 129 100.0
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 7.4e-61 238.0 251 54.6
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 2.8e-60 236.1 246 57.3
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.5e-58 230.3 239 56.5
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.2e-57 226.5 239 56.5
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 1.4e-56 223.8 243 56.4
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 3.3e-53 212.6 230 53.9
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 6.9e-51 204.9 252 48.0
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.4e-50 202.6 245 50.6
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 7.7e-50 201.4 255 47.5
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 5.0e-49 198.7 255 45.9
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 4.2e-48 195.7 251 49.8
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 3.6e-47 192.6 241 48.5
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 6.1e-47 191.8 249 47.4
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.3e-46 189.9 242 50.4
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 5.7e-45 185.3 256 46.5
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 7.4e-45 184.9 242 48.8
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 9.7e-45 184.5 242 49.6
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 1.3e-44 184.1 253 43.9
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 8.2e-44 181.4 191 52.9
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 1.1e-43 181.0 258 43.4
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.4e-43 179.9 243 49.0
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 5.9e-42 175.3 247 43.3
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 7.7e-42 174.9 238 43.3
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.3e-41 174.1 245 44.1
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 1.7e-41 173.7 256 44.5
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 6.5e-41 171.8 260 41.5
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.5e-40 169.9 243 43.2
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 9.4e-40 167.9 248 44.4
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 1.2e-39 167.5 284 40.1
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 4.7e-39 165.6 250 44.4
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 3.0e-38 162.9 207 49.3
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 3.9e-38 162.5 243 44.4
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 3.9e-38 162.5 244 43.0
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 6.7e-38 161.8 241 45.2
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.0e-37 160.2 243 43.2
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.0e-37 160.2 244 44.3
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.0e-37 160.2 244 44.3
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 2.0e-37 160.2 183 53.6
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 3.3e-37 159.5 239 43.9
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 5.7e-37 158.7 245 42.0
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 5.7e-37 158.7 230 45.2
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.2e-36 156.8 211 45.5
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 2.2e-36 156.8 247 44.1
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 4.8e-36 155.6 238 42.9
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 1.4e-35 154.1 232 43.1
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 7.7e-34 148.3 240 42.1
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 6.5e-33 145.2 241 41.1
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 3.2e-32 142.9 233 40.3
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 8.0e-31 138.3 242 43.0
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 3.0e-30 136.3 241 38.2
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 4.0e-30 136.0 244 40.6
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.5e-29 134.0 235 37.9
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 2.6e-29 133.3 241 38.2
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 4.4e-29 132.5 235 39.6
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 5.7e-29 132.1 211 42.7
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.3e-28 131.0 218 41.3
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 5.3e-27 125.6 246 36.6
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.0e-25 121.3 241 34.9
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 3.2e-24 116.3 236 34.7
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.2e-23 114.4 190 45.3
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 1.4e-22 110.9 183 37.2
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 5.2e-22 109.0 66 69.7
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.0e-21 107.1 243 34.2
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 9.8e-21 104.8 235 35.7
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 9.8e-21 104.8 218 34.9
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 9.8e-21 104.8 243 32.9
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.3e-20 104.4 242 33.1
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.8e-20 103.2 147 37.4
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 3.7e-20 102.8 225 35.6
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 1.4e-19 100.9 147 36.7
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 1.4e-19 100.9 178 38.2
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 1.8e-19 100.5 197 33.5
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.4e-19 100.1 127 40.9
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 2.4e-19 100.1 150 38.7
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 4.1e-19 99.4 184 38.6
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 5.4e-19 99.0 151 39.7
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 7.0e-19 98.6 132 40.9
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 1.2e-18 97.8 123 39.8
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 7.7e-18 95.1 180 41.7
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 1.0e-17 94.7 203 31.5
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 1.0e-17 94.7 149 36.9
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 1.3e-17 94.4 190 36.8
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 1.7e-17 94.0 177 41.8
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.8e-17 92.8 241 31.1
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 6.5e-17 92.0 242 31.8
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.1e-16 91.3 143 36.4
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 1.1e-16 91.3 155 34.8
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.5e-16 90.9 227 33.0
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 1.9e-16 90.5 184 35.3
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.2e-16 89.7 174 35.1
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 3.2e-16 89.7 184 33.2
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 4.2e-16 89.4 235 31.9
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.2e-16 89.4 155 35.5
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 7.2e-16 88.6 151 33.8
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 9.4e-16 88.2 221 30.3
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 1.2e-15 87.8 120 37.5
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 3.6e-15 86.3 199 35.7
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 3.6e-15 86.3 188 33.5
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.6e-15 86.3 209 32.1
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.7e-15 85.9 225 29.3
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 4.7e-15 85.9 225 29.3
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.4e-14 84.3 49 73.5
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 2.3e-14 83.6 249 27.3
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 6.8e-14 82.0 208 29.3
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.2e-13 81.3 130 33.8
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 2.6e-13 80.1 172 39.5
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 7.5e-13 78.6 242 28.9
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 9.8e-13 78.2 220 30.9
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 6.3e-12 75.5 127 29.9
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 1.4e-11 74.3 202 30.2
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 3.1e-11 73.2 180 30.6
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 1.6e-10 70.9 175 34.9
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 2.0e-10 70.5 207 28.5
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 2.0e-10 70.5 241 27.0
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 3.5e-10 69.7 153 30.7
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 3.5e-10 69.7 153 30.7
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 7.7e-10 68.6 176 35.8
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 7.7e-10 68.6 177 29.9
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 5.0e-09 65.9 239 27.2
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 1.1e-08 64.7 203 26.1
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 7.3e-08 62.0 194 29.4
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 8.9e-06 55.1 172 32.6


User provided reference genes

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