Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18941 Striga asiatica HOM05D011758 ORTHO05D006294 0.0e+00 1405.2 669 100.0
SGA_v2.0_scaffold24G10364 Striga asiatica HOM05D011758 ORTHO05D006294 4.9e-54 216.9 1021 23.2
Migut.C01005 Erythranthe guttata HOM05D011758 ORTHO05D006294 4.0e-48 197.2 362 34.8
SGA_v2.0_scaffold24G10317 Striga asiatica HOM05D011758 ORTHO05D006294 5.8e-47 193.4 316 37.3
SGA_v2.0_scaffold24G10398 Striga asiatica HOM05D011758 ORTHO05D006294 5.4e-45 186.8 342 34.5
SGA_v2.0_scaffold24G10418 Striga asiatica HOM05D011758 ORTHO05D006294 4.6e-44 183.7 337 36.8
SGA_v2.0_scaffold24G10401 Striga asiatica HOM05D011758 ORTHO05D006294 1.8e-40 171.8 327 34.6
Cfa009795 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.0e-35 156.0 326 31.9
Cfa009794 Carpinus fangiana HOM05D007354 ORTHO05D006294 1.6e-33 148.7 331 31.1
Migut.C01116 Erythranthe guttata HOM05D007354 ORTHO05D006294 8.9e-32 142.9 329 29.2
Peaxi162Scf01063g00029 Petunia axillaris HOM05D007354 ORTHO05D006294 1.7e-30 138.7 347 29.1
TAR374G1214 Trochodendron aralioides HOM05D007354 ORTHO05D006294 1.9e-29 135.2 313 30.7
TAR374G0265 Trochodendron aralioides HOM05D007354 ORTHO05D006294 4.2e-29 134.0 313 30.7
vmacro07713 Vaccinium macrocarpon HOM05D007354 ORTHO05D006294 1.6e-28 132.1 315 31.1
Duzib177G0507 Durio zibethinus HOM05D007354 ORTHO05D006294 3.5e-28 131.0 319 32.3
Rhsim10G0179400 Rhododendron simsii HOM05D007354 ORTHO05D006294 3.5e-28 131.0 320 30.9
Duzib260G0005 Durio zibethinus HOM05D007354 ORTHO05D006294 1.0e-27 129.4 319 31.3
Migut.K01312 Erythranthe guttata HOM05D011758 ORTHO05D006294 1.7e-27 128.6 327 30.6
QL04p042856 Quercus lobata HOM05D007354 ORTHO05D006294 2.5e-26 124.8 313 30.0
Nitab4.5_0025096g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 5.6e-26 123.6 314 28.0
Nitab4.5_0006536g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 9.6e-26 122.9 331 28.4
QL07p041251 Quercus lobata HOM05D007354 ORTHO05D006294 6.2e-25 120.2 318 30.5
Duzib177G0543 Durio zibethinus HOM05D007354 ORTHO05D006294 4.0e-24 117.5 318 29.9
SGA_v2.0_scaffold69G23065 Striga asiatica HOM05D007354 ORTHO05D006294 1.5e-23 115.5 325 30.8
TAR374G0822 Trochodendron aralioides HOM05D007354 ORTHO05D006294 2.6e-23 114.8 304 28.9
Thecc.05G212500 Theobroma cacao HOM05D007354 ORTHO05D006294 9.9e-23 112.8 340 28.5
QL07p042575 Quercus lobata HOM05D007354 ORTHO05D006294 1.7e-22 112.1 317 30.0
QL04p032674 Quercus lobata HOM05D007354 ORTHO05D006294 1.9e-21 108.6 331 27.5
Peaxi162Scf00535g00065 Petunia axillaris HOM05D007354 ORTHO05D006294 4.2e-21 107.5 326 29.1
QL07p042502 Quercus lobata HOM05D007354 ORTHO05D006294 4.2e-21 107.5 337 27.9
COL.COLO4_31188 Corchorus olitorius HOM05D007354 ORTHO05D006294 2.1e-20 105.1 319 28.5
Peaxi162Scf00535g00511 Petunia axillaris HOM05D007354 ORTHO05D006294 1.7e-19 102.1 323 27.9
Rhsim08G0204500 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.7e-19 102.1 317 29.7
PGSC0003DMG400002670 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.3e-19 101.7 334 25.7
Nitab4.5_0003541g0060 Nicotiana tabacum HOM05D007354 ORTHO05D006294 3.0e-19 101.3 314 27.7
Solyc09g005050.1 Solanum lycopersicum HOM05D007354 ORTHO05D006294 3.0e-19 101.3 344 25.9
SGA_v2.0_scaffold69G23067 Striga asiatica HOM05D007354 ORTHO05D006294 6.6e-19 100.1 332 27.1
Rhsim08G0204900 Rhododendron simsii HOM05D007354 ORTHO05D006294 1.1e-18 99.4 307 29.6
Sabra19G0132500 Salix brachista HOM05D007354 ORTHO05D006294 3.3e-18 97.8 332 25.3
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 9.6e-18 96.3 311 29.9
SGA_v2.0_scaffold24G10326 Striga asiatica HOM05D011758 ORTHO05D006294 2.8e-17 94.7 101 47.5
Peaxi162Scf00003g03421 Petunia axillaris HOM05D007354 ORTHO05D006294 8.1e-17 93.2 240 30.4
SGA_v2.0_scaffold24G10327 Striga asiatica HOM05D011758 ORTHO05D006294 8.1e-17 93.2 124 33.9
MBI19_g10186_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 2.4e-16 91.7 337 26.7
PGSC0003DMG400006262 Solanum tuberosum HOM05D007354 ORTHO05D006294 3.1e-16 91.3 320 24.4
Rhsim01G0011100 Rhododendron simsii HOM05D007354 ORTHO05D006294 4.0e-16 90.9 322 24.5
MBI19_g14409_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 9.0e-16 89.7 330 23.0
Sabra19G0121500 Salix brachista HOM05D007354 ORTHO05D006294 1.5e-15 89.0 332 25.3
SGA_v2.0_scaffold24G10382 Striga asiatica HOM05D011758 ORTHO05D006294 1.5e-15 89.0 99 44.4
PGSC0003DMG400002668 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.0e-15 88.6 334 23.4
Migut.F01441 Erythranthe guttata HOM05D011758 ORTHO05D006294 9.9e-15 86.3 98 40.8
MBI19_g47417_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 1.3e-14 85.9 336 22.3
SGA_v2.0_scaffold48G17988 Striga asiatica HOM05D011758 ORTHO05D006294 6.4e-14 83.6 105 41.9
Thecc.05G074800 Theobroma cacao HOM05D007354 ORTHO05D006294 8.4e-14 83.2 276 26.1
Nitab4.5_0006554g0030 Nicotiana tabacum HOM05D007354 ORTHO05D006294 1.1e-13 82.8 95 38.9
QL04p042649 Quercus lobata HOM05D007354 ORTHO05D006294 1.4e-13 82.4 109 37.6
PGSC0003DMG400002667 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.7e-12 78.2 326 22.7
SGA_v2.0_scaffold24G10321 Striga asiatica HOM05D011758 ORTHO05D006294 6.0e-12 77.0 105 39.0
PSO675G8679 Papaver somniferum HOM05D003035 ORTHO05D000440 7.9e-12 76.6 320 24.1
Cc10_g14350 Coffea canephora HOM05D007354 ORTHO05D006294 1.3e-11 75.9 167 32.3
COL.COLO4_22260 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.8e-11 75.5 343 28.6
PSO170G3556 Papaver somniferum HOM05D003035 ORTHO05D000440 1.8e-11 75.5 360 25.8
Migut.L00996 Erythranthe guttata HOM05D007354 ORTHO05D006294 2.3e-11 75.1 332 23.2
Sabra19G0121900 Salix brachista HOM05D007354 ORTHO05D006294 3.9e-11 74.3 136 36.8
MBI19_g39963_MAGBIO Magnolia biondii HOM05D007354 ORTHO05D006294 5.1e-11 73.9 292 25.3
Sopen01g005370 Solanum pennellii HOM05D002754 ORTHO05D003271 8.7e-11 73.2 98 38.8
Sopen09g004080 Solanum pennellii HOM05D007354 ORTHO05D006294 8.7e-11 73.2 98 38.8
Sopen09g005010 Solanum pennellii HOM05D009171 ORTHO05D006294 1.1e-10 72.8 95 37.9
COL.COLO4_22268 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.9e-10 72.0 330 25.8
COL.COLO4_37147 Corchorus olitorius HOM05D007354 ORTHO05D006294 1.9e-10 72.0 122 34.4
COL.COLO4_22246 Corchorus olitorius HOM05D007354 ORTHO05D006294 4.3e-10 70.9 141 32.6
Nitab4.5_0013936g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.3e-10 70.9 83 38.6
PGSC0003DMG400002709 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.3e-10 70.9 95 37.9
Dinv36218 Davidia involucrata HOM05D003035 ORTHO05D000440 5.6e-10 70.5 269 25.7
Sopen09g004110 Solanum pennellii HOM05D007354 ORTHO05D006294 9.6e-10 69.7 95 35.8
PSO339G6077 Papaver somniferum HOM05D003035 ORTHO05D000440 2.8e-09 68.2 371 24.0
Actinidia25469 Actinidia chinensis HOM05D007354 ORTHO05D006294 4.8e-09 67.4 97 34.0
QL07p041321 Quercus lobata HOM05D007354 ORTHO05D006294 6.2e-09 67.0 105 40.0
Sopen09g004010 Solanum pennellii HOM05D007354 ORTHO05D006294 6.2e-09 67.0 116 35.3
Sopen09g004020 Solanum pennellii HOM05D000358 ORTHO05D006294 8.1e-09 66.6 95 34.7
PGSC0003DMG400034995 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.4e-08 65.1 88 36.4
PGSC0003DMG400046725 Solanum tuberosum HOM05D007354 ORTHO05D006294 4.0e-08 64.3 79 39.2
Thecc.05G212300 Theobroma cacao HOM05D007354 ORTHO05D006294 4.0e-08 64.3 98 37.8
PGSC0003DMG400046284 Solanum tuberosum HOM05D007354 ORTHO05D006294 5.3e-08 63.9 149 29.5
Nitab4.5_0001698g0100 Nicotiana tabacum HOM05D007354 ORTHO05D006294 9.0e-08 63.2 247 24.7
CARHR280620 Cardamine hirsuta HOM05D000930 ORTHO05D000748 3.4e-07 61.2 87 37.9
Nitab4.5_0004281g0010 Nicotiana tabacum HOM05D007354 ORTHO05D006294 4.5e-07 60.8 215 26.5
Aqoxy6G00559 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.9e-07 59.7 281 22.1
EL10Ac4g07794 Beta vulgaris HOM05D003035 ORTHO05D000440 9.9e-07 59.7 343 23.9
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 2.2e-06 58.5 290 24.8
PGSC0003DMG400044861 Solanum tuberosum HOM05D007354 ORTHO05D006294 2.9e-06 58.2 85 35.3
Duzib177G0200 Durio zibethinus HOM05D007354 ORTHO05D006294 3.8e-06 57.8 81 37.0
PSO210G2788 Papaver somniferum HOM05D003035 ORTHO05D000440 3.8e-06 57.8 120 38.3


User provided reference genes

Program Settings