Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 5.9e-100 367.5 178 100.0
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 1.3e-35 153.7 190 51.6
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.6e-33 146.7 175 51.4
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 2.8e-33 146.0 189 49.7
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 2.0e-31 139.8 186 49.5
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 2.2e-30 136.3 192 46.4
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 1.6e-28 130.2 180 46.1
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 2.7e-28 129.4 206 43.2
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 1.0e-27 127.5 187 48.7
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 1.8e-27 126.7 213 42.3
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 1.8e-27 126.7 183 44.8
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 1.8e-27 126.7 216 42.6
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 2.3e-27 126.3 192 46.9
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.9e-26 123.2 197 47.2
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.9e-26 123.2 205 40.5
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.9e-26 123.2 199 43.2
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 3.3e-26 122.5 190 43.7
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 5.7e-26 121.7 197 47.2
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 5.7e-26 121.7 205 40.5
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 7.4e-26 121.3 178 48.9
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 9.7e-26 120.9 195 43.1
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 1.3e-25 120.6 208 41.8
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 1.3e-25 120.6 193 46.1
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 1.7e-25 120.2 197 45.7
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 2.8e-25 119.4 205 39.5
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 6.3e-25 118.2 197 46.2
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.1e-24 117.5 189 45.5
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 5.3e-24 115.2 189 44.4
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 5.3e-24 115.2 195 43.1
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 9.1e-24 114.4 194 43.8
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 2.6e-23 112.8 176 42.0
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 3.4e-23 112.5 193 44.6
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 4.5e-23 112.1 207 43.5
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 1.0e-22 110.9 191 44.0
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 1.3e-22 110.5 204 42.6
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 1.7e-22 110.2 206 38.8
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 2.2e-22 109.8 195 41.0
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.9e-22 109.4 201 41.3
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 3.8e-22 109.0 207 40.1
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 3.8e-22 109.0 179 41.9
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 2.5e-21 106.3 191 42.9
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 5.5e-21 105.1 191 40.8
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 7.2e-21 104.8 205 40.5
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 1.4e-19 100.5 184 39.1
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 1.4e-19 100.5 185 42.2
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 6.7e-19 98.2 180 39.4
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 1.1e-18 97.4 176 39.2
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.5e-18 97.1 182 36.3
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 2.6e-18 96.3 222 35.1
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 1.7e-17 93.6 232 35.3
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 3.7e-17 92.4 178 41.6
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 4.8e-17 92.0 183 39.9
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 1.1e-16 90.9 195 35.9
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 1.1e-16 90.9 178 41.0
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 1.4e-16 90.5 193 37.3
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 5.3e-16 88.6 173 43.4
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 5.3e-16 88.6 165 38.8
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 1.2e-15 87.4 191 39.8
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 4.5e-15 85.5 181 41.4
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 5.9e-15 85.1 181 39.8
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 7.7e-15 84.7 234 34.6
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 7.7e-15 84.7 186 38.7
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 1.0e-14 84.3 225 34.2
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.0e-14 84.3 181 40.3
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 1.3e-14 84.0 200 33.5
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 1.7e-14 83.6 222 33.3
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 3.8e-14 82.4 226 32.3
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 6.5e-14 81.6 183 35.5
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 8.5e-14 81.3 180 37.2
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 1.1e-13 80.9 232 34.1
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 1.4e-13 80.5 231 34.6
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 3.2e-13 79.3 226 32.3
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 4.2e-13 79.0 233 33.0
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 5.5e-13 78.6 228 33.3
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 7.2e-13 78.2 230 32.2
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 7.2e-13 78.2 226 32.7
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 7.2e-13 78.2 182 40.7
Actinidia15225 Actinidia chinensis HOM05D007332 ORTHO05D009297 9.4e-13 77.8 84 53.6
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 9.4e-13 77.8 153 38.6
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 3.6e-12 75.9 187 38.5
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 4.7e-12 75.5 148 39.9
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 6.1e-12 75.1 220 32.7
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 6.1e-12 75.1 178 38.8
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 1.4e-11 73.9 223 31.8
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 2.3e-11 73.2 226 32.3
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 6.7e-11 71.6 203 32.5
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 6.7e-11 71.6 203 32.5
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 8.8e-11 71.2 230 32.6
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 8.8e-11 71.2 187 32.6
BraA02t07143Z Brassica rapa HOM05D007332 ORTHO05D009297 1.1e-10 70.9 202 33.7
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.1e-10 70.9 120 39.2
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 1.1e-10 70.9 120 39.2
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 1.3e-09 67.4 220 32.7
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 1.7e-09 67.0 199 34.2
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 3.7e-09 65.9 169 35.5
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 4.8e-09 65.5 211 30.8
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 4.8e-09 65.5 149 32.9
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 8.2e-09 64.7 115 37.4
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 5.3e-08 62.0 147 36.1
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 2.0e-07 60.1 177 33.3
AT1G21695 Arabidopsis thaliana HOM05D011160 ORTHO05D013203 2.2e-06 56.6 53 50.9
CARHR022050 Cardamine hirsuta HOM05D011160 ORTHO05D013203 2.9e-06 56.2 191 32.5
AL1G34860 Arabidopsis lyrata HOM05D011160 ORTHO05D013203 5.0e-06 55.5 127 34.6
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 5.0e-06 55.5 184 31.0
Carub.0001s2113 Capsella rubella HOM05D011160 ORTHO05D013203 6.5e-06 55.1 203 31.0


User provided reference genes

Program Settings